RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	PRM5	P40476	318 aa		1.33	□□□□□ -2.2
HMRA2	YCR096C	OST1	P41543	476 aa	Known RBP	1.33	□□□□□ -2.2
HMRA2	YCR096C	HEF3	P53978	1044 aa	Known RBP	1.33	□□□□□ -2.2
HMRA2	YCR096C	TOF2	Q02208	771 aa		1.33	□□□□□ -2.2
HMRA2	YCR096C	MFB1	Q04922	465 aa		1.33	□□□□□ -2.2
HMRA2	YCR096C	RRD2	Q12461	358 aa		1.33	□□□□□ -2.2
HMRA2	YCR096C	SAM1	P10659	382 aa	Known RBP	1.32	□□□□□ -2.2
HMRA2	YCR096C	SAM2	P19358	384 aa	Known RBP	1.32	□□□□□ -2.2
HMRA2	YCR096C	BUB3	P26449	341 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	MNS1	P32906	549 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	CHK1	P38147	527 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	MSR1	P38714	643 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	MBB1	P39534	108 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	ALG5	P40350	334 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	SYG1	P40528	902 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	UPF3	P48412	387 aa	Known RBP	1.32	□□□□□ -2.2
HMRA2	YCR096C	MRX6	P48564	524 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	POP6	P53218	158 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	RTS3	P53289	263 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	VMS1	Q04311	632 aa	Known RBP	1.32	□□□□□ -2.2
HMRA2	YCR096C	YMR018W	Q04364	514 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	YEH1	Q07804	573 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	YDR056C	Q12025	205 aa		1.32	□□□□□ -2.2
HMRA2	YCR096C	NOP58	Q12499	511 aa	Known RBP	1.32	□□□□□ -2.2
HMRA2	YCR096C	GAL80	P04387	435 aa		1.31	□□□□□ -2.2
HMRA2	YCR096C	PRP2	P20095	876 aa	Predicted RBP	1.31	□□□□□ -2.2
HMRA2	YCR096C	MSG5	P38590	489 aa		1.31	□□□□□ -2.2
HMRA2	YCR096C	FLC2	P39719	783 aa		1.31	□□□□□ -2.2
HMRA2	YCR096C	ALK1	P43633	760 aa	Known RBP	1.31	□□□□□ -2.2
HMRA2	YCR096C	TRS85	P46944	698 aa		1.31	□□□□□ -2.2
HMRA2	YCR096C	CAF130	P53280	1122 aa	Predicted RBP	1.31	□□□□□ -2.2
HMRA2	YCR096C	IBD2	P53892	351 aa		1.31	□□□□□ -2.2
HMRA2	YCR096C	YPL199C	Q08954	240 aa		1.31	□□□□□ -2.2
HMRA2	YCR096C	NMD4	Q12129	218 aa		1.31	□□□□□ -2.2
HMRA2	YCR096C	WBP1	P33767	430 aa	Known RBP	1.3	□□□□□ -2.2
HMRA2	YCR096C	STB6	P36085	766 aa		1.3	□□□□□ -2.2
HMRA2	YCR096C	DOT5	P40553	215 aa		1.3	□□□□□ -2.2
HMRA2	YCR096C	VID30	P53076	958 aa		1.3	□□□□□ -2.2
HMRA2	YCR096C	HST1	P53685	503 aa		1.3	□□□□□ -2.2
HMRA2	YCR096C	SLG1	P54867	378 aa		1.3	□□□□□ -2.2
HMRA2	YCR096C	SVL3	Q03088	825 aa	Known RBP	1.3	□□□□□ -2.2
HMRA2	YCR096C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	1.3	□□□□□ -2.2	not detected
HMRA2	YCR096C	HUA2	Q12134	243 aa		1.3	□□□□□ -2.2
HMRA2	YCR096C	RAV1	P47104	1357 aa		1.3	□□□□□ -2.2
HMRA2	YCR096C	CBS1	P14066	229 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	OLE1	P21147	510 aa	Known RBP	1.29	□□□□□ -2.2
HMRA2	YCR096C	PRD1	P25375	712 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	SSH4	P32343	579 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	REG2	P38232	338 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	MUM2	P38236	366 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	YBR137W	P38276	179 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	YEL057C	P39983	233 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	ISC1	P40015	477 aa	Known RBP	1.29	□□□□□ -2.2
HMRA2	YCR096C	VID27	P40157	782 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	PET130	P47065	347 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	BRO1	P48582	844 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	VPS38	Q05919	439 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	OPY2	Q06810	360 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	FDH1	Q08911	376 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	YPQ1	Q12010	308 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	YJR112W-A	Q3E743	109 aa		1.29	□□□□□ -2.2
HMRA2	YCR096C	SEM1	O94742	89 aa		1.28	□□□□□ -2.2
HMRA2	YCR096C	SEC53	P07283	254 aa	Known RBP	1.28	□□□□□ -2.2
HMRA2	YCR096C	YCR100C	P25606	316 aa		1.28	□□□□□ -2.2
HMRA2	YCR096C	PEP3	P27801	918 aa		1.28	□□□□□ -2.2
HMRA2	YCR096C	PAP1	P29468	568 aa	Known RBP	1.28	□□□□□ -2.2
HMRA2	YCR096C	ITR1	P30605	584 aa		1.28	□□□□□ -2.2
HMRA2	YCR096C	NUP2	P32499	720 aa		1.28	□□□□□ -2.2
HMRA2	YCR096C	MFT1	P33441	392 aa	Known RBP	1.28	□□□□□ -2.2
HMRA2	YCR096C	YCR041W	P37265	110 aa		1.28	□□□□□ -2.2
HMRA2	YCR096C	THI2	P38141	450 aa		1.28	□□□□□ -2.2
HMRA2	YCR096C	ERP2	P39704	215 aa		1.28	□□□□□ -2.2
HMRA2	YCR096C	POP1	P41812	875 aa		1.28	□□□□□ -2.2
HMRA2	YCR096C	YJR085C	P47131	105 aa	Known RBP	1.28	□□□□□ -2.2
HMRA2	YCR096C	ARE2	P53629	642 aa	Known RBP	1.28	□□□□□ -2.2
HMRA2	YCR096C	VPS75	P53853	264 aa		1.28	□□□□□ -2.2
HMRA2	YCR096C	CTI6	Q08923	506 aa		1.28	□□□□□ -2.2
HMRA2	YCR096C	ENT1	Q12518	454 aa		1.28	□□□□□ -2.2
HMRA2	YCR096C	RPL31B	P0C2H9	113 aa	Known RBP	1.27	□□□□□ -2.21
HMRA2	YCR096C	MET8	P15807	274 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	KKQ8	P36004	724 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	MIX23	P38162	196 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	RCK2	P38623	610 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	SEO1	P39709	593 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	NOP16	P40007	231 aa	Known RBP	1.27	□□□□□ -2.21
HMRA2	YCR096C	SSU1	P41930	458 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	OCA1	P50946	238 aa	Predicted RBP	1.27	□□□□□ -2.21
HMRA2	YCR096C	YGL108C	P53139	140 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	CWC25	P53854	179 aa	Known RBP	1.27	□□□□□ -2.21
HMRA2	YCR096C	HXT11	P54862	567 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	TIM10	P87108	93 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	HER2	Q03557	464 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	VHS1	Q03785	461 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	PDS5	Q04264	1277 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	TAP42	Q04372	366 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	RCN2	Q12044	265 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	AVL9	Q12500	764 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	YDL007C-A	Q2V2Q0	85 aa		1.27	□□□□□ -2.21
HMRA2	YCR096C	HSC82	P15108	705 aa	Known RBP	1.26	□□□□□ -2.21
HMRA2	YCR096C	ATP10	P18496	279 aa		1.26	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms