RNA–Protein interactions for RNA: YCR039C

MATALPHA2, Transcript of Homeobox-domain protein, yeastyeast

Gene MATALPHA2, Length 633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MATALPHA2YCR039C RPS8AP0CX39 200 aaKnown RBP2.38□□□□□ -2.03
MATALPHA2YCR039C RPS8BP0CX40 200 aaKnown RBP2.38□□□□□ -2.03
MATALPHA2YCR039C SAM1P10659 382 aaKnown RBP2.38□□□□□ -2.03
MATALPHA2YCR039C SAM2P19358 384 aaKnown RBP2.38□□□□□ -2.03
MATALPHA2YCR039C DPB3P27344 201 aa2.38□□□□□ -2.03
MATALPHA2YCR039C SEF1P34228 1148 aa2.38□□□□□ -2.03
MATALPHA2YCR039C ISC1P40015 477 aaKnown RBP2.38□□□□□ -2.03
MATALPHA2YCR039C RPC11Q04307 110 aaPredicted RBP2.38□□□□□ -2.03
MATALPHA2YCR039C YEH1Q07804 573 aa2.38□□□□□ -2.03
MATALPHA2YCR039C NOP58Q12499 511 aaKnown RBP2.38□□□□□ -2.03
MATALPHA2YCR039C YAR066WP0CX18 203 aa2.37□□□□□ -2.03
MATALPHA2YCR039C YHR214WP0CX19 203 aa2.37□□□□□ -2.03
MATALPHA2YCR039C HSC82P15108 705 aaKnown RBP2.37□□□□□ -2.03
MATALPHA2YCR039C MRPL10P36520 322 aa2.37□□□□□ -2.03
MATALPHA2YCR039C CCT6P39079 546 aa2.37□□□□□ -2.03
MATALPHA2YCR039C ALG5P40350 334 aa2.37□□□□□ -2.03
MATALPHA2YCR039C AIM22P47051 409 aa2.37□□□□□ -2.03
MATALPHA2YCR039C URB2P47108 1174 aa2.37□□□□□ -2.03
MATALPHA2YCR039C CWC25P53854 179 aaKnown RBP2.37□□□□□ -2.03
MATALPHA2YCR039C MRP51Q02950 344 aa2.37□□□□□ -2.03
MATALPHA2YCR039C YPT6Q99260 215 aa2.37□□□□□ -2.03
MATALPHA2YCR039C ELO2P25358 347 aa2.36□□□□□ -2.03
MATALPHA2YCR039C NUP2P32499 720 aa2.36□□□□□ -2.03
MATALPHA2YCR039C VID24P38263 362 aa2.36□□□□□ -2.03
MATALPHA2YCR039C YBR225WP38321 900 aa2.36□□□□□ -2.03
MATALPHA2YCR039C IMD4P50094 524 aaKnown RBP2.36□□□□□ -2.03
MATALPHA2YCR039C VID30P53076 958 aa2.36□□□□□ -2.03
MATALPHA2YCR039C PNG1Q02890 363 aa2.36□□□□□ -2.03
MATALPHA2YCR039C ENT1Q12518 454 aa2.36□□□□□ -2.03
MATALPHA2YCR039C BI3Q9ZZW7 517 aa2.36□□□□□ -2.03
MATALPHA2YCR039C SEC53P07283 254 aaKnown RBP2.35□□□□□ -2.03
MATALPHA2YCR039C PRP2P20095 876 aaPredicted RBP2.35□□□□□ -2.03
MATALPHA2YCR039C RIB5P38145 238 aa2.35□□□□□ -2.03
MATALPHA2YCR039C MSR1P38714 643 aa2.35□□□□□ -2.03
MATALPHA2YCR039C FLC2P39719 783 aa2.35□□□□□ -2.03
MATALPHA2YCR039C VID27P40157 782 aa2.35□□□□□ -2.03
MATALPHA2YCR039C SGN1P40561 250 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
MATALPHA2YCR039C SSN8P47821 323 aa2.35□□□□□ -2.03
MATALPHA2YCR039C IRC25Q07951 179 aa2.35□□□□□ -2.03
MATALPHA2YCR039C CUE5Q08412 411 aaKnown RBP2.35□□□□□ -2.03
MATALPHA2YCR039C YDR056CQ12025 205 aa2.35□□□□□ -2.03
MATALPHA2YCR039C NMD4Q12129 218 aa2.35□□□□□ -2.03
MATALPHA2YCR039C RLM1Q12224 676 aa2.35□□□□□ -2.03
MATALPHA2YCR039C COR1P07256 457 aa2.34□□□□□ -2.03
MATALPHA2YCR039C NFT1P0CE68 1218 aa2.34□□□□□ -2.03
MATALPHA2YCR039C AAC3P18238 307 aa2.34□□□□□ -2.03
MATALPHA2YCR039C PEP3P27801 918 aa2.34□□□□□ -2.03
MATALPHA2YCR039C ATP11P32453 318 aa2.34□□□□□ -2.03
MATALPHA2YCR039C TCD2P36101 447 aaKnown RBP2.34□□□□□ -2.03
MATALPHA2YCR039C GAB1P41733 394 aa2.34□□□□□ -2.03
MATALPHA2YCR039C POP1P41812 875 aa2.34□□□□□ -2.03
MATALPHA2YCR039C YJR085CP47131 105 aaKnown RBP2.34□□□□□ -2.03
MATALPHA2YCR039C BRO1P48582 844 aa2.34□□□□□ -2.03
MATALPHA2YCR039C IES4Q08561 116 aa2.34□□□□□ -2.03
MATALPHA2YCR039C MUM3Q08750 479 aa2.34□□□□□ -2.03
MATALPHA2YCR039C RAD61Q99359 647 aa2.34□□□□□ -2.03
MATALPHA2YCR039C GAL80P04387 435 aa2.33□□□□□ -2.04
MATALPHA2YCR039C LEU4P06208 619 aaKnown RBP2.33□□□□□ -2.04
MATALPHA2YCR039C REG2P38232 338 aa2.33□□□□□ -2.04
MATALPHA2YCR039C MST28P39552 234 aa2.33□□□□□ -2.04
MATALPHA2YCR039C ERP2P39704 215 aa2.33□□□□□ -2.04
MATALPHA2YCR039C SYG1P40528 902 aa2.33□□□□□ -2.04
MATALPHA2YCR039C VPS38Q05919 439 aa2.33□□□□□ -2.04
MATALPHA2YCR039C RCN2Q12044 265 aa2.33□□□□□ -2.04
MATALPHA2YCR039C YJR112W-AQ3E743 109 aa2.33□□□□□ -2.04
MATALPHA2YCR039C RAV1P47104 1357 aa2.33□□□□□ -2.04
MATALPHA2YCR039C SEM1O94742 89 aa2.32□□□□□ -2.04
MATALPHA2YCR039C PRB1P09232 635 aa2.32□□□□□ -2.04
MATALPHA2YCR039C MBB1P39534 108 aa2.32□□□□□ -2.04
MATALPHA2YCR039C NOP16P40007 231 aaKnown RBP2.32□□□□□ -2.04
MATALPHA2YCR039C UTP18P40362 594 aaPredicted RBP2.32□□□□□ -2.04
MATALPHA2YCR039C TRS85P46944 698 aa2.32□□□□□ -2.04
MATALPHA2YCR039C MRX6P48564 524 aa2.32□□□□□ -2.04
MATALPHA2YCR039C MTM1P53320 366 aa2.32□□□□□ -2.04
MATALPHA2YCR039C VHS1Q03785 461 aa2.32□□□□□ -2.04
MATALPHA2YCR039C CTI6Q08923 506 aa2.32□□□□□ -2.04
MATALPHA2YCR039C CCH1P50077 2039 aa2.32□□□□□ -2.04
MATALPHA2YCR039C TRP1P00912 224 aa2.31□□□□□ -2.04
MATALPHA2YCR039C CBS1P14066 229 aa2.31□□□□□ -2.04
MATALPHA2YCR039C CBP4P37267 147 aa2.31□□□□□ -2.04
MATALPHA2YCR039C BMT2P38278 337 aa2.31□□□□□ -2.04
MATALPHA2YCR039C KEL1P38853 1164 aaKnown RBP2.31□□□□□ -2.04
MATALPHA2YCR039C DOT5P40553 215 aa2.31□□□□□ -2.04
MATALPHA2YCR039C LAM5P43560 674 aa2.31□□□□□ -2.04
MATALPHA2YCR039C UPF3P48412 387 aaKnown RBP2.31□□□□□ -2.04
MATALPHA2YCR039C CAF130P53280 1122 aaPredicted RBP2.31□□□□□ -2.04
MATALPHA2YCR039C HXT11P54862 567 aa2.31□□□□□ -2.04
MATALPHA2YCR039C ECM11Q04110 302 aa2.31□□□□□ -2.04
MATALPHA2YCR039C YPQ1Q12010 308 aa2.31□□□□□ -2.04
MATALPHA2YCR039C AVL9Q12500 764 aa2.31□□□□□ -2.04
MATALPHA2YCR039C CHK1P38147 527 aa2.3□□□□□ -2.04
MATALPHA2YCR039C YHR131CP38835 850 aa2.3□□□□□ -2.04
MATALPHA2YCR039C YGR066CP53242 292 aa2.3□□□□□ -2.04
MATALPHA2YCR039C PPM1Q04081 328 aa2.3□□□□□ -2.04
MATALPHA2YCR039C SOV1Q04748 898 aa2.3□□□□□ -2.04
MATALPHA2YCR039C GFD2P25370 566 aaKnown RBP2.29□□□□□ -2.04
MATALPHA2YCR039C PRD1P25375 712 aa2.29□□□□□ -2.04
MATALPHA2YCR039C POP5P28005 173 aa2.29□□□□□ -2.04
MATALPHA2YCR039C NPL6P32832 435 aa2.29□□□□□ -2.04
MATALPHA2YCR039C WBP1P33767 430 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms