RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	CMC1	P36064	111 aa		4.14	□□□□□ -1.75
UBS1	YBR165W	ISC1	P40015	477 aa	Known RBP	4.14	□□□□□ -1.75
UBS1	YBR165W	PRE5	P40302	234 aa	Known RBP	4.14	□□□□□ -1.75
UBS1	YBR165W	SPO22	P40511	975 aa		4.14	□□□□□ -1.75
UBS1	YBR165W	YIL067C	P40514	678 aa		4.14	□□□□□ -1.75
UBS1	YBR165W	YGR210C	P42942	411 aa		4.14	□□□□□ -1.75
UBS1	YBR165W	TRS85	P46944	698 aa		4.14	□□□□□ -1.75
UBS1	YBR165W	IBD2	P53892	351 aa		4.14	□□□□□ -1.75
UBS1	YBR165W	ADD37	Q03233	198 aa		4.14	□□□□□ -1.75
UBS1	YBR165W	HHF1	P02309	103 aa	Known RBP	4.13	□□□□□ -1.75
UBS1	YBR165W	YCR100C	P25606	316 aa		4.13	□□□□□ -1.75
UBS1	YBR165W	ARO2	P28777	376 aa	Known RBP	4.13	□□□□□ -1.75
UBS1	YBR165W	YEL045C	P32616	141 aa		4.13	□□□□□ -1.75
UBS1	YBR165W	GYP6	P32806	458 aa		4.13	□□□□□ -1.75
UBS1	YBR165W	NAT2	P37293	288 aa		4.13	□□□□□ -1.75
UBS1	YBR165W	VID24	P38263	362 aa		4.13	□□□□□ -1.75
UBS1	YBR165W	NDT80	P38830	627 aa		4.13	□□□□□ -1.75
UBS1	YBR165W	REE1	P40893	198 aa		4.13	□□□□□ -1.75
UBS1	YBR165W	YFL067W	P43537	175 aa		4.13	□□□□□ -1.75
UBS1	YBR165W	PNG1	Q02890	363 aa		4.13	□□□□□ -1.75
UBS1	YBR165W	THP3	Q12049	470 aa	Known RBP	4.13	□□□□□ -1.75
UBS1	YBR165W	TMS1	Q12116	473 aa		4.13	□□□□□ -1.75
UBS1	YBR165W	RHO2	P06781	192 aa		4.12	□□□□□ -1.75
UBS1	YBR165W	CBP4	P37267	147 aa		4.12	□□□□□ -1.75
UBS1	YBR165W	VMA13	P41807	478 aa	Known RBP	4.12	□□□□□ -1.75
UBS1	YBR165W	POP6	P53218	158 aa		4.12	□□□□□ -1.75
UBS1	YBR165W	JJJ1	P53863	590 aa		4.12	□□□□□ -1.75
UBS1	YBR165W	YDL121C	Q07541	149 aa		4.12	□□□□□ -1.75
UBS1	YBR165W	ATG29	Q12092	213 aa		4.12	□□□□□ -1.75
UBS1	YBR165W	RRI2	Q12348	645 aa		4.12	□□□□□ -1.75
UBS1	YBR165W	MIX23	P38162	196 aa		4.11	□□□□□ -1.75
UBS1	YBR165W	MET18	P40469	1032 aa		4.11	□□□□□ -1.75
UBS1	YBR165W	RPT6	Q01939	405 aa	Known RBP	4.11	□□□□□ -1.75
UBS1	YBR165W	MED1	Q12321	566 aa		4.11	□□□□□ -1.75
UBS1	YBR165W	YAR066W	P0CX18	203 aa		4.1	□□□□□ -1.75
UBS1	YBR165W	YHR214W	P0CX19	203 aa		4.1	□□□□□ -1.75
UBS1	YBR165W	ATP10	P18496	279 aa		4.1	□□□□□ -1.75
UBS1	YBR165W	CPR4	P25334	318 aa		4.1	□□□□□ -1.75
UBS1	YBR165W	SDH3	P33421	198 aa		4.1	□□□□□ -1.75
UBS1	YBR165W	PMT1	P33775	817 aa		4.1	□□□□□ -1.75
UBS1	YBR165W	THI2	P38141	450 aa		4.1	□□□□□ -1.75
UBS1	YBR165W	NCS2	P53923	493 aa	Predicted RBP	4.1	□□□□□ -1.75
UBS1	YBR165W	TIM10	P87108	93 aa		4.1	□□□□□ -1.75
UBS1	YBR165W	YLR108C	Q12259	485 aa		4.1	□□□□□ -1.75
UBS1	YBR165W	ISY1	P21374	235 aa	Predicted RBP	4.09	□□□□□ -1.75
UBS1	YBR165W	SPB1	P25582	841 aa	Predicted RBP	4.09	□□□□□ -1.75
UBS1	YBR165W	RAD14	P28519	371 aa		4.09	□□□□□ -1.75
UBS1	YBR165W	FAA2	P39518	744 aa		4.09	□□□□□ -1.75
UBS1	YBR165W	HXT14	P42833	540 aa		4.09	□□□□□ -1.75
UBS1	YBR165W	SDT1	P53078	280 aa		4.09	□□□□□ -1.75
UBS1	YBR165W	MRP51	Q02950	344 aa		4.09	□□□□□ -1.75
UBS1	YBR165W	RQC1	Q05468	723 aa	Known RBP	4.09	□□□□□ -1.75
UBS1	YBR165W	PAL1	Q05518	499 aa	Known RBP	4.09	□□□□□ -1.75
UBS1	YBR165W	YPL199C	Q08954	240 aa		4.09	□□□□□ -1.75
UBS1	YBR165W	ARG3	P05150	338 aa		4.08	□□□□□ -1.76
UBS1	YBR165W	AFG1	P32317	509 aa		4.08	□□□□□ -1.76
UBS1	YBR165W	UTP9	P38882	575 aa	Known RBP	4.08	□□□□□ -1.76
UBS1	YBR165W	TFG2	P41896	400 aa	Predicted RBP	4.08	□□□□□ -1.76
UBS1	YBR165W	YGR149W	P48236	432 aa		4.08	□□□□□ -1.76
UBS1	YBR165W	TSR1	Q07381	788 aa	Known RBP	4.08	□□□□□ -1.76
UBS1	YBR165W	SPS22	P25380	463 aa		4.07	□□□□□ -1.76
UBS1	YBR165W	CCT2	P39076	527 aa	Known RBP	4.07	□□□□□ -1.76
UBS1	YBR165W	MST28	P39552	234 aa		4.07	□□□□□ -1.76
UBS1	YBR165W	ARF3	P40994	183 aa	RIP-Chip data	4.07	□□□□□ -1.76	RIP-Chip
UBS1	YBR165W	SSN8	P47821	323 aa		4.07	□□□□□ -1.76
UBS1	YBR165W	RMD9	P53140	646 aa	Known RBP	4.07	□□□□□ -1.76
UBS1	YBR165W	GOR1	P53839	350 aa		4.07	□□□□□ -1.76
UBS1	YBR165W	TOF1	P53840	1238 aa		4.07	□□□□□ -1.76
UBS1	YBR165W	MRPL35	Q06678	367 aa		4.07	□□□□□ -1.76
UBS1	YBR165W	RRG7	Q08774	242 aa	Predicted RBP	4.07	□□□□□ -1.76
UBS1	YBR165W	RIM20	Q12033	661 aa		4.07	□□□□□ -1.76
UBS1	YBR165W	RAD61	Q99359	647 aa		4.07	□□□□□ -1.76
UBS1	YBR165W	SAM1	P10659	382 aa	Known RBP	4.06	□□□□□ -1.76
UBS1	YBR165W	SAM2	P19358	384 aa	Known RBP	4.06	□□□□□ -1.76
UBS1	YBR165W	SPR1	P32603	445 aa		4.06	□□□□□ -1.76
UBS1	YBR165W	REC114	P32841	428 aa		4.06	□□□□□ -1.76
UBS1	YBR165W	STB6	P36085	766 aa		4.06	□□□□□ -1.76
UBS1	YBR165W	YCR041W	P37265	110 aa		4.06	□□□□□ -1.76
UBS1	YBR165W	DED81	P38707	554 aa	Known RBP	4.06	□□□□□ -1.76
UBS1	YBR165W	YIP1	P53039	248 aa		4.06	□□□□□ -1.76
UBS1	YBR165W	GIR2	Q03768	265 aa	Predicted RBP	4.06	□□□□□ -1.76
UBS1	YBR165W	GRX6	Q12438	231 aa		4.06	□□□□□ -1.76
UBS1	YBR165W	MRP7	P12687	371 aa		4.05	□□□□□ -1.76
UBS1	YBR165W	GPI10	P30777	616 aa		4.05	□□□□□ -1.76
UBS1	YBR165W	HXT1	P32465	570 aa		4.05	□□□□□ -1.76
UBS1	YBR165W	PRP21	P32524	280 aa	Predicted RBP	4.05	□□□□□ -1.76
UBS1	YBR165W	SWD3	P38123	315 aa		4.05	□□□□□ -1.76
UBS1	YBR165W	RRT2	P38332	387 aa		4.05	□□□□□ -1.76
UBS1	YBR165W	OST1	P41543	476 aa	Known RBP	4.05	□□□□□ -1.76
UBS1	YBR165W	IRC6	P43615	237 aa		4.05	□□□□□ -1.76
UBS1	YBR165W	MHR1	Q06630	226 aa		4.05	□□□□□ -1.76
UBS1	YBR165W	HRT3	Q12347	344 aa		4.05	□□□□□ -1.76
UBS1	YBR165W	YML133C	Q03099	1374 aa		4.04	□□□□□ -1.76
UBS1	YBR165W	YLL067C	Q07888	1374 aa		4.04	□□□□□ -1.76
UBS1	YBR165W	YLL066C	Q99208	1374 aa		4.04	□□□□□ -1.76
UBS1	YBR165W	SPS4	P09937	338 aa		4.04	□□□□□ -1.76
UBS1	YBR165W	CLN3	P13365	580 aa		4.04	□□□□□ -1.76
UBS1	YBR165W	ECM25	P32525	599 aa		4.04	□□□□□ -1.76
UBS1	YBR165W	NIP100	P33420	868 aa		4.04	□□□□□ -1.76
UBS1	YBR165W	PTH1	P38876	190 aa	Known RBP	4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms