RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C YCR100CP25606 316 aa2.41□□□□□ -2.02
RPB5YBR154C PAH1P32567 862 aa2.41□□□□□ -2.02
RPB5YBR154C DPH1P40487 425 aaKnown RBP2.41□□□□□ -2.02
RPB5YBR154C POP1P41812 875 aa2.41□□□□□ -2.02
RPB5YBR154C AIM22P47051 409 aa2.41□□□□□ -2.02
RPB5YBR154C SSN8P47821 323 aa2.41□□□□□ -2.02
RPB5YBR154C LCL3P53153 274 aa2.41□□□□□ -2.02
RPB5YBR154C MUM3Q08750 479 aa2.41□□□□□ -2.02
RPB5YBR154C NOP58Q12499 511 aaKnown RBP2.41□□□□□ -2.02
RPB5YBR154C FAB1P34756 2278 aa2.41□□□□□ -2.02
RPB5YBR154C RAV1P47104 1357 aa2.4□□□□□ -2.02
RPB5YBR154C LEU4P06208 619 aaKnown RBP2.4□□□□□ -2.03
RPB5YBR154C IMP2'P32351 346 aa2.4□□□□□ -2.03
RPB5YBR154C NOC2P39744 710 aaKnown RBP2.4□□□□□ -2.03
RPB5YBR154C ISC1P40015 477 aaKnown RBP2.4□□□□□ -2.03
RPB5YBR154C NCA3P46955 337 aa2.4□□□□□ -2.03
RPB5YBR154C PNG1Q02890 363 aa2.4□□□□□ -2.03
RPB5YBR154C MRP51Q02950 344 aa2.4□□□□□ -2.03
RPB5YBR154C TSA2Q04120 196 aa2.4□□□□□ -2.03
RPB5YBR154C YDR056CQ12025 205 aa2.4□□□□□ -2.03
RPB5YBR154C RTP1Q12751 981 aa2.4□□□□□ -2.03
RPB5YBR154C YBR126W-AQ8TGU7 68 aa2.4□□□□□ -2.03
RPB5YBR154C COR1P07256 457 aa2.39□□□□□ -2.03
RPB5YBR154C SAM1P10659 382 aaKnown RBP2.39□□□□□ -2.03
RPB5YBR154C SAM2P19358 384 aaKnown RBP2.39□□□□□ -2.03
RPB5YBR154C MNS1P32906 549 aa2.39□□□□□ -2.03
RPB5YBR154C CCT6P39079 546 aa2.39□□□□□ -2.03
RPB5YBR154C MBB1P39534 108 aa2.39□□□□□ -2.03
RPB5YBR154C FIN1Q03898 291 aa2.39□□□□□ -2.03
RPB5YBR154C YEH1Q07804 573 aa2.39□□□□□ -2.03
RPB5YBR154C HUA2Q12134 243 aa2.39□□□□□ -2.03
RPB5YBR154C NOP16P40007 231 aaKnown RBP2.38□□□□□ -2.03
RPB5YBR154C SIM1P40472 476 aa2.38□□□□□ -2.03
RPB5YBR154C OST1P41543 476 aaKnown RBP2.38□□□□□ -2.03
RPB5YBR154C IMD4P50094 524 aaKnown RBP2.38□□□□□ -2.03
RPB5YBR154C MDM1Q01846 1127 aa2.38□□□□□ -2.03
RPB5YBR154C SOV1Q04748 898 aa2.38□□□□□ -2.03
RPB5YBR154C TSR2Q06672 205 aaKnown RBP2.38□□□□□ -2.03
RPB5YBR154C MED1Q12321 566 aa2.38□□□□□ -2.03
RPB5YBR154C HSP26P15992 214 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
RPB5YBR154C ELO2P25358 347 aa2.37□□□□□ -2.03
RPB5YBR154C ATP11P32453 318 aa2.37□□□□□ -2.03
RPB5YBR154C MUD2P36084 527 aaKnown RBP2.37□□□□□ -2.03
RPB5YBR154C RIB5P38145 238 aa2.37□□□□□ -2.03
RPB5YBR154C YBR225WP38321 900 aa2.37□□□□□ -2.03
RPB5YBR154C SYG1P40528 902 aa2.37□□□□□ -2.03
RPB5YBR154C IMH1Q06704 911 aaKnown RBP2.37□□□□□ -2.03
RPB5YBR154C YPT6Q99260 215 aa2.37□□□□□ -2.03
RPB5YBR154C SEM1O94742 89 aa2.36□□□□□ -2.03
RPB5YBR154C INH1P01097 85 aa2.36□□□□□ -2.03
RPB5YBR154C CDC31P06704 161 aaKnown RBP2.36□□□□□ -2.03
RPB5YBR154C MPE1P35728 441 aaKnown RBP2.36□□□□□ -2.03
RPB5YBR154C KKQ8P36004 724 aa2.36□□□□□ -2.03
RPB5YBR154C TCD2P36101 447 aaKnown RBP2.36□□□□□ -2.03
RPB5YBR154C JNM1P36224 373 aa2.36□□□□□ -2.03
RPB5YBR154C MUM2P38236 366 aa2.36□□□□□ -2.03
RPB5YBR154C LYS14P40971 790 aa2.36□□□□□ -2.03
RPB5YBR154C SRB7P47822 140 aa2.36□□□□□ -2.03
RPB5YBR154C UPF3P48412 387 aaKnown RBP2.36□□□□□ -2.03
RPB5YBR154C CWC25P53854 179 aaKnown RBP2.36□□□□□ -2.03
RPB5YBR154C RLM1Q12224 676 aa2.36□□□□□ -2.03
RPB5YBR154C ENT1Q12518 454 aa2.36□□□□□ -2.03
RPB5YBR154C RAD61Q99359 647 aa2.36□□□□□ -2.03
RPB5YBR154C CDC16P09798 840 aa2.35□□□□□ -2.03
RPB5YBR154C MSG5P38590 489 aa2.35□□□□□ -2.03
RPB5YBR154C MST28P39552 234 aa2.35□□□□□ -2.03
RPB5YBR154C FLC2P39719 783 aa2.35□□□□□ -2.03
RPB5YBR154C NDE1P40215 560 aa2.35□□□□□ -2.03
RPB5YBR154C ESL1P40456 1118 aa2.35□□□□□ -2.03
RPB5YBR154C FDH1Q08911 376 aa2.35□□□□□ -2.03
RPB5YBR154C NMD4Q12129 218 aa2.35□□□□□ -2.03
RPB5YBR154C MRP7P12687 371 aa2.34□□□□□ -2.03
RPB5YBR154C AAC3P18238 307 aa2.34□□□□□ -2.03
RPB5YBR154C LAM5P43560 674 aa2.34□□□□□ -2.03
RPB5YBR154C OCA1P50946 238 aaPredicted RBP2.34□□□□□ -2.03
RPB5YBR154C DUO1P53168 247 aaKnown RBP2.34□□□□□ -2.03
RPB5YBR154C YGR066CP53242 292 aa2.34□□□□□ -2.03
RPB5YBR154C GIR2Q03768 265 aaPredicted RBP2.34□□□□□ -2.03
RPB5YBR154C YKU80Q04437 629 aa2.34□□□□□ -2.03
RPB5YBR154C VPS38Q05919 439 aa2.34□□□□□ -2.03
RPB5YBR154C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
RPB5YBR154C IRC25Q07951 179 aa2.34□□□□□ -2.03
RPB5YBR154C AVL9Q12500 764 aa2.34□□□□□ -2.03
RPB5YBR154C RPS8AP0CX39 200 aaKnown RBP2.33□□□□□ -2.04
RPB5YBR154C RPS8BP0CX40 200 aaKnown RBP2.33□□□□□ -2.04
RPB5YBR154C PRD1P25375 712 aa2.33□□□□□ -2.04
RPB5YBR154C NOP4P37838 685 aaKnown RBP2.33□□□□□ -2.04
RPB5YBR154C TRS85P46944 698 aa2.33□□□□□ -2.04
RPB5YBR154C NGL3Q03210 505 aa2.33□□□□□ -2.04
RPB5YBR154C YMR181CQ03231 154 aa2.33□□□□□ -2.04
RPB5YBR154C SPC19Q03954 165 aa2.33□□□□□ -2.04
RPB5YBR154C MFB1Q04922 465 aa2.33□□□□□ -2.04
RPB5YBR154C PKH2Q12236 1081 aaKnown RBP2.33□□□□□ -2.04
RPB5YBR154C YJR112W-AQ3E743 109 aa2.33□□□□□ -2.04
RPB5YBR154C SEC53P07283 254 aaKnown RBP2.32□□□□□ -2.04
RPB5YBR154C MET8P15807 274 aa2.32□□□□□ -2.04
RPB5YBR154C PEP3P27801 918 aa2.32□□□□□ -2.04
RPB5YBR154C REC114P32841 428 aa2.32□□□□□ -2.04
RPB5YBR154C MRPL10P36520 322 aa2.32□□□□□ -2.04
RPB5YBR154C YCR041WP37265 110 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms