RNA–Protein interactions for RNA: YBR006W

UGA2, Transcript of Succinate semialdehyde dehydrogenase, yeast

Gene UGA2, Length 1,494 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UGA2	YBR006W	SWC4	P53201	476 aa		4.8	□□□□□ -1.64
UGA2	YBR006W	TGL2	P54857	326 aa		4.8	□□□□□ -1.64
UGA2	YBR006W	REX2	P54964	269 aa	Known RBP	4.8	□□□□□ -1.64
UGA2	YBR006W	YDR476C	Q03362	224 aa		4.8	□□□□□ -1.64
UGA2	YBR006W	RSM24	Q03976	319 aa		4.8	□□□□□ -1.64
UGA2	YBR006W	YEH2	Q07950	538 aa		4.8	□□□□□ -1.64
UGA2	YBR006W	SMF3	Q12078	473 aa	Predicted RBP	4.8	□□□□□ -1.64
UGA2	YBR006W	YLR049C	Q12110	428 aa		4.8	□□□□□ -1.64
UGA2	YBR006W	YOR012W	Q12351	137 aa		4.8	□□□□□ -1.64
UGA2	YBR006W	FAB1	P34756	2278 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	CCH1	P50077	2039 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	PHO5	P00635	467 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	CPA1	P07258	411 aa	Known RBP	4.79	□□□□□ -1.64
UGA2	YBR006W	COS2	P0CX12	379 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	COS3	P0CX13	379 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	YAR066W	P0CX18	203 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	YHR214W	P0CX19	203 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	GUK1	P15454	187 aa	Known RBP	4.79	□□□□□ -1.64
UGA2	YBR006W	EPT1	P22140	391 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	VPS34	P22543	875 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	DBR1	P24309	405 aa	Known RBP	4.79	□□□□□ -1.64
UGA2	YBR006W	PUP3	P25451	205 aa	Known RBP	4.79	□□□□□ -1.64
UGA2	YBR006W	PPZ1	P26570	692 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	AAR2	P32357	355 aa	Predicted RBP	4.79	□□□□□ -1.64
UGA2	YBR006W	RPS1A	P33442	255 aa	Known RBP	4.79	□□□□□ -1.64
UGA2	YBR006W	YKL100C	P34248	587 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	YBR071W	P38243	211 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	GIC1	P38785	314 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	JEM1	P40358	645 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	FKH2	P41813	862 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	COS4	P43542	379 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	ILM1	P47155	203 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	COG2	P53271	262 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	SNO2	P53823	222 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	SRP1	Q02821	542 aa	Known RBP	4.79	□□□□□ -1.64
UGA2	YBR006W	CCE1	Q03702	353 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	RPC11	Q04307	110 aa	Predicted RBP	4.79	□□□□□ -1.64
UGA2	YBR006W	CDA2	Q06703	312 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	GPN2	Q08726	347 aa	Predicted RBP	4.79	□□□□□ -1.64
UGA2	YBR006W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
UGA2	YBR006W	GPB1	Q08886	897 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	DAP1	Q12091	152 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	ERP4	Q12450	207 aa		4.79	□□□□□ -1.64
UGA2	YBR006W	RPS9A	O13516	197 aa	Known RBP	4.78	□□□□□ -1.64
UGA2	YBR006W	SPT3	P06844	337 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	KIN2	P13186	1147 aa	Known RBP	4.78	□□□□□ -1.64
UGA2	YBR006W	RSR1	P13856	272 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	REC107	P21651	314 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	MEF1	P25039	761 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	COX13	P32799	129 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	YPT52	P36018	234 aa	Known RBP	4.78	□□□□□ -1.64
UGA2	YBR006W	YBL029W	P38201	376 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	IML3	P38265	245 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	CYC2	P38909	366 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	DSS1	P39112	969 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	NPT1	P39683	429 aa	Known RBP	4.78	□□□□□ -1.64
UGA2	YBR006W	GDH3	P39708	457 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	MET18	P40469	1032 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	IAH1	P41734	238 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	GCD10	P41814	478 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	STB2	P46679	850 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	MAL11	P53048	616 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	IMA1	P53051	589 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	NMA2	P53204	395 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	PLB2	Q03674	706 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	ROT1	Q03691	256 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	BCH1	Q05029	724 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	BCP1	Q06338	283 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	RSC3	Q06639	885 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	CDA1	Q06702	301 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	NSE1	Q07913	336 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	MCH5	Q08777	521 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	SAS5	Q99314	248 aa		4.78	□□□□□ -1.64
UGA2	YBR006W	SUC2	P00724	532 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	CDC21	P06785	304 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	SAN1	P22470	610 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	RFA2	P26754	273 aa	Known RBP	4.77	□□□□□ -1.65
UGA2	YBR006W	PHO91	P27514	894 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	ZIP1	P31111	875 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	AFR1	P33304	620 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	CSE1	P33307	960 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	GMH1	P36125	273 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	YER034W	P40022	185 aa	Known RBP	4.77	□□□□□ -1.65
UGA2	YBR006W	EMP65	P40085	556 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	UTP18	P40362	594 aa	Predicted RBP	4.77	□□□□□ -1.65
UGA2	YBR006W	MAM33	P40513	266 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	YFR018C	P43599	363 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	NAS6	P50086	228 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	YGL108C	P53139	140 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	NPY1	P53164	384 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	ARC35	P53731	342 aa	Known RBP	4.77	□□□□□ -1.65
UGA2	YBR006W	TDA7	P53882	636 aa	Predicted RBP	4.77	□□□□□ -1.65
UGA2	YBR006W	PRO2	P54885	456 aa	Known RBP	4.77	□□□□□ -1.65
UGA2	YBR006W	PRP38	Q00723	242 aa	Predicted RBP	4.77	□□□□□ -1.65
UGA2	YBR006W	ACL4	Q03771	387 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	YMR111C	Q04461	462 aa	Predicted RBP	4.77	□□□□□ -1.65
UGA2	YBR006W	YLR413W	Q06689	675 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	HUA2	Q12134	243 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	PST1	Q12355	444 aa		4.77	□□□□□ -1.65
UGA2	YBR006W	CET1	O13297	549 aa	Predicted RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms