RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C HAP2P06774 265 aa1.3□□□□□ -2.2
YAR009CYAR009C PUT2P07275 575 aa1.3□□□□□ -2.2
YAR009CYAR009C CAR2P07991 424 aaKnown RBP1.3□□□□□ -2.2
YAR009CYAR009C POL4P25615 582 aa1.3□□□□□ -2.2
YAR009CYAR009C UBP11P36026 717 aa1.3□□□□□ -2.2
YAR009CYAR009C RRP3P38712 501 aaKnown RBP1.3□□□□□ -2.2
YAR009CYAR009C YND1P40009 630 aa1.3□□□□□ -2.2
YAR009CYAR009C YAT2P40017 923 aa1.3□□□□□ -2.2
YAR009CYAR009C YGL242CP53066 181 aa1.3□□□□□ -2.2
YAR009CYAR009C RSM23Q01163 450 aa1.3□□□□□ -2.2
YAR009CYAR009C SSK1Q07084 712 aa1.3□□□□□ -2.2
YAR009CYAR009C NRT1Q08485 598 aa1.3□□□□□ -2.2
YAR009CYAR009C YDR056CQ12025 205 aa1.3□□□□□ -2.2
YAR009CYAR009C ARD1P07347 238 aaPredicted RBP1.29□□□□□ -2.2
YAR009CYAR009C BOS1P25385 244 aa1.29□□□□□ -2.2
YAR009CYAR009C YIH1P25637 258 aa1.29□□□□□ -2.2
YAR009CYAR009C CMK1P27466 446 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C SNC1P31109 117 aa1.29□□□□□ -2.2
YAR009CYAR009C SAC6P32599 642 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C YKL100CP34248 587 aa1.29□□□□□ -2.2
YAR009CYAR009C MRPL37P36532 105 aa1.29□□□□□ -2.2
YAR009CYAR009C RTT107P38850 1070 aa1.29□□□□□ -2.2
YAR009CYAR009C YIR014WP40570 242 aa1.29□□□□□ -2.2
YAR009CYAR009C RPS10BP46784 105 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C DUO1P53168 247 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C EFM6P53970 246 aa1.29□□□□□ -2.2
YAR009CYAR009C YMR160WQ03823 816 aa1.29□□□□□ -2.2
YAR009CYAR009C COQ9Q05779 260 aa1.29□□□□□ -2.2
YAR009CYAR009C LUC7Q07508 261 aaPredicted RBP1.29□□□□□ -2.2
YAR009CYAR009C GIS3Q12418 502 aa1.29□□□□□ -2.2
YAR009CYAR009C NOP58Q12499 511 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C MF(ALPHA)1P01149 165 aa1.29□□□□□ -2.2
YAR009CYAR009C SEC53P07283 254 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C IMG1P25626 169 aa1.29□□□□□ -2.2
YAR009CYAR009C PPZ1P26570 692 aa1.29□□□□□ -2.2
YAR009CYAR009C SSE2P32590 693 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C YBR144CP34215 104 aa1.29□□□□□ -2.2
YAR009CYAR009C PHD1P36093 366 aa1.29□□□□□ -2.2
YAR009CYAR009C NOP4P37838 685 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C NOP16P40007 231 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C FET5P43561 622 aa1.29□□□□□ -2.2
YAR009CYAR009C PYK2P52489 506 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C LCL3P53153 274 aa1.29□□□□□ -2.2
YAR009CYAR009C CUL3P53202 744 aa1.29□□□□□ -2.2
YAR009CYAR009C SVL3Q03088 825 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C YKU80Q04437 629 aa1.29□□□□□ -2.2
YAR009CYAR009C CDC45Q08032 650 aa1.29□□□□□ -2.2
YAR009CYAR009C RPS10AQ08745 105 aaPredicted RBP1.29□□□□□ -2.2
YAR009CYAR009C NDD1Q08887 554 aa1.29□□□□□ -2.2
YAR009CYAR009C FMP40Q08968 688 aaPredicted RBP1.29□□□□□ -2.2
YAR009CYAR009C BSC1Q12140 328 aa1.29□□□□□ -2.2
YAR009CYAR009C ARP6Q12509 438 aa1.29□□□□□ -2.2
YAR009CYAR009C SEM1O94742 89 aa1.29□□□□□ -2.2
YAR009CYAR009C TCP1P12612 559 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C BAR1P12630 587 aa1.29□□□□□ -2.2
YAR009CYAR009C MTF1P14908 341 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C KAR3P17119 729 aa1.29□□□□□ -2.2
YAR009CYAR009C KGD1P20967 1014 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C SAN1P22470 610 aa1.29□□□□□ -2.2
YAR009CYAR009C BUD5P25300 642 aaPredicted RBP1.29□□□□□ -2.2
YAR009CYAR009C PUP3P25451 205 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C YBL055CP34220 418 aaPredicted RBP1.29□□□□□ -2.2
YAR009CYAR009C YNK1P36010 153 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C MRX3P38172 270 aa1.29□□□□□ -2.2
YAR009CYAR009C LAG1P38703 411 aa1.29□□□□□ -2.2
YAR009CYAR009C YHR054CP38780 354 aa1.29□□□□□ -2.2
YAR009CYAR009C FHL1P39521 936 aa1.29□□□□□ -2.2
YAR009CYAR009C YER186CP40101 306 aa1.29□□□□□ -2.2
YAR009CYAR009C AXL1P40851 1208 aa1.29□□□□□ -2.2
YAR009CYAR009C AZF1P41696 914 aa1.29□□□□□ -2.2
YAR009CYAR009C RET3P53600 189 aa1.29□□□□□ -2.2
YAR009CYAR009C DUG3P53871 357 aa1.29□□□□□ -2.2
YAR009CYAR009C IPI3P53877 555 aa1.29□□□□□ -2.2
YAR009CYAR009C AIM32Q04689 311 aa1.29□□□□□ -2.2
YAR009CYAR009C YDL057WQ07379 328 aa1.29□□□□□ -2.2
YAR009CYAR009C YDL121CQ07541 149 aa1.29□□□□□ -2.2
YAR009CYAR009C NMD4Q12129 218 aa1.29□□□□□ -2.2
YAR009CYAR009C PDH1Q12428 516 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C PGA3Q12746 312 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C MEX67Q99257 599 aaKnown RBP1.29□□□□□ -2.2
YAR009CYAR009C CDC23P16522 626 aa1.28□□□□□ -2.2
YAR009CYAR009C AAC3P18238 307 aa1.28□□□□□ -2.2
YAR009CYAR009C RIM2P38127 377 aa1.28□□□□□ -2.2
YAR009CYAR009C FLC2P39719 783 aa1.28□□□□□ -2.2
YAR009CYAR009C YJL068CP40363 299 aa1.28□□□□□ -2.2
YAR009CYAR009C YGL138CP53122 345 aa1.28□□□□□ -2.2
YAR009CYAR009C SMM1P53720 384 aaKnown RBP1.28□□□□□ -2.2
YAR009CYAR009C NGL3Q03210 505 aa1.28□□□□□ -2.2
YAR009CYAR009C YEH2Q07950 538 aa1.28□□□□□ -2.2
YAR009CYAR009C YPL272CQ08984 517 aa1.28□□□□□ -2.2
YAR009CYAR009C SPE4Q12455 300 aa1.28□□□□□ -2.2
YAR009CYAR009C SUI2P20459 304 aaKnown RBP1.28□□□□□ -2.2
YAR009CYAR009C SEC14P24280 304 aaKnown RBP1.28□□□□□ -2.2
YAR009CYAR009C PEP3P27801 918 aa1.28□□□□□ -2.2
YAR009CYAR009C CSE1P33307 960 aa1.28□□□□□ -2.2
YAR009CYAR009C NUP133P36161 1157 aa1.28□□□□□ -2.2
YAR009CYAR009C RPL32P38061 130 aaKnown RBP1.28□□□□□ -2.2
YAR009CYAR009C YBL028CP38202 106 aa1.28□□□□□ -2.2
YAR009CYAR009C OPY1P38271 328 aa1.28□□□□□ -2.2
YAR009CYAR009C YGL260WP53056 76 aa1.28□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms