RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 NT5C2P49902 561 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 SEMA3FQ13275 785 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 TMEM266Q2M3C6 531 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 FOXR1Q6PIV2 292 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 FAM71BQ8TC56 605 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 RAD54LQ92698 747 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 GGA1Q9UJY5 639 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 SYF2O95926 243 aaKnown RBP15.49■□□□□ 0.07
SPIN3-239ENST00000640463 ACTN2P35609 894 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
SPIN3-239ENST00000640463 FIGNQ5HY92 759 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 NFRKBQ6P4R8 1299 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 PAXIP1Q6ZW49 1069 aaPredicted RBP15.49■□□□□ 0.07
SPIN3-239ENST00000640463 NLRC4Q9NPP4 1024 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 MTMR4Q9NYA4 1195 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 POLLQ9UGP5 575 aa15.49■□□□□ 0.07
SPIN3-239ENST00000640463 ZNF831Q5JPB2 1677 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 RNF40O75150 1001 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 MAN2A1Q16706 1144 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 SH2D4AQ9H788 454 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 LCMT1Q9UIC8 334 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 SALL4Q9UJQ4 1053 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 HPCAL4Q9UM19 191 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 C6orf229H3BNL8 230 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 RIMBP2O15034 1052 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 FXR2P51116 673 aaKnown RBP eCLIP15.48■□□□□ 0.07
SPIN3-239ENST00000640463 APBA1Q02410 837 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 GFPT1Q06210 699 aaPredicted RBP15.48■□□□□ 0.07
SPIN3-239ENST00000640463 KRT79Q5XKE5 535 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 CREG2Q8IUH2 290 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 GOLGA5Q8TBA6 731 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 FGFBP2Q9BYJ0 223 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 SNX12Q9UMY4 172 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 MARCH6O60337 910 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 USO1O60763 962 aaKnown RBP15.48■□□□□ 0.07
SPIN3-239ENST00000640463 PPP1R11O60927 126 aaPredicted RBP15.48■□□□□ 0.07
SPIN3-239ENST00000640463 PPP1R2P41236 205 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 GTF2IP78347 998 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 CDK17Q00537 523 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 MUM1L1Q5H9M0 696 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 LRRC55Q6ZSA7 311 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 TMC4Q7Z404 712 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 STK17AQ9UEE5 414 aa15.48■□□□□ 0.07
SPIN3-239ENST00000640463 ANO9A1A5B4 782 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 BUB1O43683 1085 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 RAD21O60216 631 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 TACC1O75410 805 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 IL1R1P14778 569 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 SLC7A5Q01650 507 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 LEKR1Q6ZMV7 388 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 GUF1Q8N442 669 aaKnown RBP15.47■□□□□ 0.07
SPIN3-239ENST00000640463 MSL3Q8N5Y2 521 aaKnown RBP15.47■□□□□ 0.07
SPIN3-239ENST00000640463 LRRC1Q9BTT6 524 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 ACBD3Q9H3P7 528 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 PLEKHA4Q9H4M7 779 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 DAGLAQ9Y4D2 1042 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 PVALEFA0A1B0GWK0 134 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 ESYT2A0FGR8 921 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 PLCG2P16885 1265 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 DNA2P51530 1060 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 RASSF7Q02833 373 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 CCNI2Q6ZMN8 369 aaPredicted RBP15.47■□□□□ 0.07
SPIN3-239ENST00000640463 CACNA2D4Q7Z3S7 1137 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 CRACR2AQ9BSW2 395 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 SELENOOQ9BVL4 669 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 MXD3Q9BW11 206 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 JMJD4Q9H9V9 463 aa15.47■□□□□ 0.07
SPIN3-239ENST00000640463 DMGDHQ9UI17 866 aaKnown RBP15.47■□□□□ 0.07
SPIN3-239ENST00000640463 NPHP3-ACAD11A0A0J9YXS1 232 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 GGCXP38435 758 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 MAGEA1P43355 309 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 ENOX2Q16206 610 aaKnown RBP15.46■□□□□ 0.07
SPIN3-239ENST00000640463 SKIDA1Q1XH10 827 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 MAP9Q49MG5 647 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 NELFCDQ8IXH7 590 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 ADGRF4Q8IZF3 695 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 TRIM58Q8NG06 486 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 BAP1Q92560 729 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 TSGA10Q9BZW7 698 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 DDX4Q9NQI0 724 aaKnown RBP15.46■□□□□ 0.07
SPIN3-239ENST00000640463 JRKLQ9Y4A0 524 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 ZC3H4Q9UPT8 1303 aaKnown RBP15.46■□□□□ 0.07
SPIN3-239ENST00000640463 TRAF5O00463 557 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 HNRNPH3P31942 346 aaKnown RBP15.46■□□□□ 0.07
SPIN3-239ENST00000640463 KCNMA1Q12791 1236 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 COBLL1Q53SF7 1204 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 KCTD1Q719H9 257 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 HAS1Q92839 578 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 RPGRIP1Q96KN7 1286 aa15.46■□□□□ 0.07
SPIN3-239ENST00000640463 TARSL2A2RTX5 802 aaKnown RBP15.46■□□□□ 0.06
SPIN3-239ENST00000640463 TULP2O00295 520 aa15.46■□□□□ 0.06
SPIN3-239ENST00000640463 ATP2B4P23634 1241 aa15.46■□□□□ 0.06
SPIN3-239ENST00000640463 SMARCA1P28370 1054 aa15.46■□□□□ 0.06
SPIN3-239ENST00000640463 NAP1L1P55209 391 aaKnown RBP15.46■□□□□ 0.06
SPIN3-239ENST00000640463 TDRD12Q587J7 1177 aaKnown RBP15.46■□□□□ 0.06
SPIN3-239ENST00000640463 TBC1D16Q8TBP0 767 aa15.46■□□□□ 0.06
SPIN3-239ENST00000640463 TRIM34Q9BYJ4 488 aa15.46■□□□□ 0.06
SPIN3-239ENST00000640463 RAB34Q9BZG1 259 aa15.46■□□□□ 0.06
SPIN3-239ENST00000640463 MED4Q9NPJ6 270 aa15.46■□□□□ 0.06
SPIN3-239ENST00000640463 DDX25Q9UHL0 483 aaKnown RBP15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms