RNA–Protein interactions for RNA: ENST00000638913.1

PAX6-244, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,390 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-244ENST00000638913 CENPPQ6IPU0 288 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 NELFCDQ8IXH7 590 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 CCDC170Q8IYT3 715 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 MTMR9Q96QG7 549 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 THSD7AQ9UPZ6 1657 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 TRIM66O15016 1216 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 GTF2IP78347 998 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 RASSF7Q02833 373 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 KCTD1Q719H9 257 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 ZSCAN29Q8IWY8 852 aaPredicted RBP11.41□□□□□ -0.58
PAX6-244ENST00000638913 ERGIC2Q96RQ1 377 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 LRRC1Q9BTT6 524 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 RABEP2Q9H5N1 569 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 POLLQ9UGP5 575 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 GGA1Q9UJY5 639 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 USP21Q9UK80 565 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 SIK3Q9Y2K2 1263 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 CASZ1Q86V15 1759 aa11.41□□□□□ -0.58
PAX6-244ENST00000638913 MPHOSPH10O00566 681 aaKnown RBP11.4□□□□□ -0.58
PAX6-244ENST00000638913 PPP1R11O60927 126 aaPredicted RBP11.4□□□□□ -0.58
PAX6-244ENST00000638913 ACTN2P35609 894 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 GGCXP38435 758 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 TMEM266Q2M3C6 531 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 RC3H1Q5TC82 1133 aaKnown RBP11.4□□□□□ -0.58
PAX6-244ENST00000638913 PRR5LQ6MZQ0 368 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 LEKR1Q6ZMV7 388 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 UNC13DQ70J99 1090 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 CACNA2D4Q7Z3S7 1137 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 RETREG2Q8NC44 543 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 EHBP1Q8NDI1 1231 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 MS4A14Q96JA4 679 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 ZHX3Q9H4I2 956 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 MAGEF1Q9HAY2 307 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 POLD4Q9HCU8 107 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 HPCAL4Q9UM19 191 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 FAM170AA1A519 330 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 SCNN1DP51172 638 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 RNASE9P60153 205 aaKnown RBP11.4□□□□□ -0.58
PAX6-244ENST00000638913 TUBB4BP68371 445 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 CKAP4Q07065 602 aaKnown RBP11.4□□□□□ -0.58
PAX6-244ENST00000638913 TDRD12Q587J7 1177 aaKnown RBP11.4□□□□□ -0.58
PAX6-244ENST00000638913 KRT79Q5XKE5 535 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 CREG2Q8IUH2 290 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 FAM71BQ8TC56 605 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 RAD54LQ92698 747 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 SELENOOQ9BVL4 669 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 MTMR4Q9NYA4 1195 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 DMGDHQ9UI17 866 aaKnown RBP11.4□□□□□ -0.58
PAX6-244ENST00000638913 PLAGL2Q9UPG8 496 aa11.4□□□□□ -0.58
PAX6-244ENST00000638913 BTAF1O14981 1849 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 E9PMD0 336 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 TRAF5O00463 557 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 USO1O60763 962 aaKnown RBP11.39□□□□□ -0.59
PAX6-244ENST00000638913 TACC1O75410 805 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 MAGEA1P43355 309 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 SHROOM1Q2M3G4 852 aaPredicted RBP11.39□□□□□ -0.59
PAX6-244ENST00000638913 DNAAF5Q86Y56 855 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 C10orf67Q8IYJ2 551 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 ADGRF4Q8IZF3 695 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 GOLGA5Q8TBA6 731 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 RIOX1Q9H6W3 641 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 SH2D4AQ9H788 454 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 DDX4Q9NQI0 724 aaKnown RBP11.39□□□□□ -0.59
PAX6-244ENST00000638913 SNX12Q9UMY4 172 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 CCDC88AQ3V6T2 1871 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 TNRC6CQ9HCJ0 1690 aaKnown RBP11.39□□□□□ -0.59
PAX6-244ENST00000638913 FAM196BA6NMK8 535 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 USP17L10C9JJH3 530 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 HSPA1LP34931 641 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 STAT3P40763 770 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 SLC1A4P43007 532 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 SNAP25P60880 206 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 MAN2A1Q16706 1144 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 PTPROQ16827 1216 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 CCDC40Q4G0X9 1142 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 CCNI2Q6ZMN8 369 aaPredicted RBP11.39□□□□□ -0.59
PAX6-244ENST00000638913 PURBQ96QR8 312 aaKnown RBP11.39□□□□□ -0.59
PAX6-244ENST00000638913 JMJD4Q9H9V9 463 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 DDX25Q9UHL0 483 aaKnown RBP11.39□□□□□ -0.59
PAX6-244ENST00000638913 DAGLAQ9Y4D2 1042 aa11.39□□□□□ -0.59
PAX6-244ENST00000638913 A0A1W2PQJ5 194 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 USP17L15C9J2P7 530 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 USP17L13C9JLJ4 530 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 USP17L11C9JVI0 530 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 USP17L18D6R9N7 530 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 USP17L22D6RA61 530 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 USP17L17D6RBQ6 530 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 USP17L19D6RCP7 530 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 USP17L20D6RJB6 530 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 TAL1P17542 331 aaPredicted RBP11.38□□□□□ -0.59
PAX6-244ENST00000638913 USP17L24Q0WX57 530 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 KCNMA1Q12791 1236 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 USP17L6PQ6QN14 398 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 LRRC55Q6ZSA7 311 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 SND1Q7KZF4 910 aaKnown RBP eCLIP11.38□□□□□ -0.59
PAX6-244ENST00000638913 HAS1Q92839 578 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 OSBPL9Q96SU4 736 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 PSD3Q9NYI0 1048 aa11.38□□□□□ -0.59
PAX6-244ENST00000638913 PACSIN2Q9UNF0 486 aaPredicted RBP11.38□□□□□ -0.59
PAX6-244ENST00000638913 JRKLQ9Y4A0 524 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms