RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 ZNF70Q9UC06 446 aaPredicted RBP4.61□□□□□ -1.67
CLN5-214ENST00000636705 FAM153BP0C7A2 387 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 PSMC4P43686 418 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 CHRNDQ07001 517 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 ITKQ08881 620 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 CTC1Q2NKJ3 1217 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 LRIT3Q3SXY7 679 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 LINC01559Q495D7 138 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 NBPF12Q5TAG4 269 aaPredicted RBP4.61□□□□□ -1.67
CLN5-214ENST00000636705 ZKSCAN2Q63HK3 967 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 NXNQ6DKJ4 435 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 FAM109BQ6ICB4 259 aaPredicted RBP4.61□□□□□ -1.67
CLN5-214ENST00000636705 TPH2Q8IWU9 490 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 ANKRD42Q8N9B4 389 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 GOLM1Q8NBJ4 401 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 LINS1Q8NG48 757 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.61□□□□□ -1.67
CLN5-214ENST00000636705 TEKT1Q969V4 418 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 R3HDMLQ9H3Y0 253 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 AASDHPPTQ9NRN7 309 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 PKD2L1Q9P0L9 805 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 ZNF180Q9UJW8 692 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 HDAC5Q9UQL6 1122 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 MAP3K2Q9Y2U5 619 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 IPPQ9Y573 584 aa4.61□□□□□ -1.67
CLN5-214ENST00000636705 KDM3BQ7LBC6 1761 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 ANP32CO43423 234 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 FRAT2O75474 233 aaPredicted RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 MYCP01106 439 aaPredicted RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 HSP90AA1P07900 732 aaKnown RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 CCL5P13501 91 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 HIBADHP31937 336 aaKnown RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 HLTFQ14527 1009 aaKnown RBP eCLIP4.6□□□□□ -1.67
CLN5-214ENST00000636705 C1QTNF12Q5T7M4 302 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 L1TD1Q5T7N2 865 aaKnown RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 C17orf99Q6UX52 265 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 DRC7Q8IY82 874 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 DZIP1LQ8IYY4 767 aaKnown RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 TEX19Q8NA77 164 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 EHBP1Q8NDI1 1231 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 FBXO27Q8NI29 283 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 U2AF1L4Q8WU68 220 aaKnown RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 BRI3BPQ8WY22 251 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 CLMNQ96JQ2 1002 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 PRMT6Q96LA8 375 aaPredicted RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 PTPN18Q99952 460 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 GREM2Q9H772 168 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.6□□□□□ -1.67
CLN5-214ENST00000636705 OBP2AQ9NY56 170 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 MYPNQ86TC9 1320 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 PDE4DIPQ5VU43 2346 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 BACH1O14867 736 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 GIPC1O14908 333 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 PF4P02776 101 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 ZNF853P0CG23 659 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 SOX5P35711 763 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 GIPRP48546 466 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 GEMIN4P57678 1058 aaKnown RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 COL9A2Q14055 689 aaPredicted RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 VGLL4Q14135 290 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 GCKRQ14397 625 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 GRM2Q14416 872 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 AGERQ15109 404 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 SEZ6Q53EL9 994 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 MFSD14BQ5SR56 506 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 HHIPL2Q6UWX4 724 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 LDHAL6AQ6ZMR3 332 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 RELL1Q8IUW5 271 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 PHC3Q8NDX5 983 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 SNIP1Q8TAD8 396 aaKnown RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 OSGEPQ9NPF4 335 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 CNNM1Q9NRU3 951 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 C9orf78Q9NZ63 289 aaPredicted RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 KCNH4Q9UQ05 1017 aa4.6□□□□□ -1.67
CLN5-214ENST00000636705 SUPT16HQ9Y5B9 1047 aaKnown RBP4.6□□□□□ -1.67
CLN5-214ENST00000636705 MROH5Q6ZUA9 1318 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 ADGRA2Q96PE1 1338 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 MYBBP1AQ9BQG0 1328 aaKnown RBP4.59□□□□□ -1.67
CLN5-214ENST00000636705 RPAP1Q9BWH6 1393 aaPredicted RBP4.59□□□□□ -1.67
CLN5-214ENST00000636705 TMEM238LA0A1B0GVL6 79 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 CLRN2A0PK11 232 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 PI4KAP2A4QPH2 592 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 NEURL1BA8MQ27 555 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 BTBD19C9JJ37 291 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 APAF1O14727 1248 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 SIAH2O43255 324 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 TRIM27P14373 513 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 HALP42357 657 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 FBXW10Q5XX13 1052 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 CC2D1AQ6P1N0 951 aaPredicted RBP4.59□□□□□ -1.67
CLN5-214ENST00000636705 C6orf15Q6UXA7 325 aaPredicted RBP4.59□□□□□ -1.67
CLN5-214ENST00000636705 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.59□□□□□ -1.67
CLN5-214ENST00000636705 TREML1Q86YW5 311 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 STAG2Q8N3U4 1231 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 PI4KAP1Q8N8J0 262 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 TDRD7Q8NHU6 1098 aaKnown RBP4.59□□□□□ -1.67
CLN5-214ENST00000636705 USP33Q8TEY7 942 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 JPH3Q8WXH2 748 aaPredicted RBP4.59□□□□□ -1.67
CLN5-214ENST00000636705 IFT43Q96FT9 208 aa4.59□□□□□ -1.67
CLN5-214ENST00000636705 CLUHP3Q96NS8 147 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms