RNA–Protein interactions for RNA: ENST00000629303.2

UBE2A-209, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 4

Gene UBE2A, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-209ENST00000629303 PNMA1Q8ND90 353 aa12.56□□□□□ -0.4
UBE2A-209ENST00000629303 DNERQ8NFT8 737 aa12.56□□□□□ -0.4
UBE2A-209ENST00000629303 SEZ6LQ9BYH1 1024 aa12.56□□□□□ -0.4
UBE2A-209ENST00000629303 EPHX3Q9H6B9 360 aa12.56□□□□□ -0.4
UBE2A-209ENST00000629303 JMJD4Q9H9V9 463 aa12.56□□□□□ -0.4
UBE2A-209ENST00000629303 SENP2Q9HC62 589 aa12.56□□□□□ -0.4
UBE2A-209ENST00000629303 HDAC6Q9UBN7 1215 aa12.56□□□□□ -0.4
UBE2A-209ENST00000629303 MTUS1Q9ULD2 1270 aa12.56□□□□□ -0.4
UBE2A-209ENST00000629303 DOCK5Q9H7D0 1870 aa12.56□□□□□ -0.4
UBE2A-209ENST00000629303 NKRFO15226 690 aaKnown RBP eCLIP12.55□□□□□ -0.4
UBE2A-209ENST00000629303 TLL1O43897 1013 aa12.55□□□□□ -0.4
UBE2A-209ENST00000629303 IGHDP01880 384 aa12.55□□□□□ -0.4
UBE2A-209ENST00000629303 CXCL10P02778 98 aa12.55□□□□□ -0.4
UBE2A-209ENST00000629303 SUPT20HL2P0C7V6 817 aa12.55□□□□□ -0.4
UBE2A-209ENST00000629303 SDSP20132 328 aa12.55□□□□□ -0.4
UBE2A-209ENST00000629303 RBL2Q08999 1139 aa12.55□□□□□ -0.4
UBE2A-209ENST00000629303 SKIV2LQ15477 1246 aaKnown RBP12.55□□□□□ -0.4
UBE2A-209ENST00000629303 LRRC8DQ7L1W4 858 aa12.55□□□□□ -0.4
UBE2A-209ENST00000629303 PLEKHM2Q8IWE5 1019 aa12.55□□□□□ -0.4
UBE2A-209ENST00000629303 FTOQ9C0B1 505 aaKnown RBP eCLIP12.55□□□□□ -0.4
UBE2A-209ENST00000629303 GTF2IRD1Q9UHL9 959 aa12.55□□□□□ -0.4
UBE2A-209ENST00000629303 MICAL3Q7RTP6 2002 aa12.55□□□□□ -0.4
UBE2A-209ENST00000629303 TRIOO75962 3097 aa12.55□□□□□ -0.4
UBE2A-209ENST00000629303 LINC01553A4QN01 128 aa12.54□□□□□ -0.4
UBE2A-209ENST00000629303 HAS3O00219 553 aa12.54□□□□□ -0.4
UBE2A-209ENST00000629303 F2P00734 622 aa12.54□□□□□ -0.4
UBE2A-209ENST00000629303 CKBP12277 381 aa12.54□□□□□ -0.4
UBE2A-209ENST00000629303 RFC2P35250 354 aa12.54□□□□□ -0.4
UBE2A-209ENST00000629303 SP2Q02086 613 aa12.54□□□□□ -0.4
UBE2A-209ENST00000629303 COL9A3Q14050 684 aaPredicted RBP12.54□□□□□ -0.4
UBE2A-209ENST00000629303 FAM117BQ6P1L5 589 aa12.54□□□□□ -0.4
UBE2A-209ENST00000629303 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.54□□□□□ -0.4
UBE2A-209ENST00000629303 MFSD6Q6ZSS7 791 aa12.54□□□□□ -0.4
UBE2A-209ENST00000629303 SESTD1Q86VW0 696 aa12.54□□□□□ -0.4
UBE2A-209ENST00000629303 ALG1Q9BT22 464 aa12.54□□□□□ -0.4
UBE2A-209ENST00000629303 DDX41Q9UJV9 622 aaKnown RBP12.54□□□□□ -0.4
UBE2A-209ENST00000629303 FAM86C2PA6NEL3 165 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 TRIM6-TRIM34B2RNG4 842 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 GH1P01241 217 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 HOXD8P13378 290 aaPredicted RBP12.53□□□□□ -0.4
UBE2A-209ENST00000629303 SELPP16109 830 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 HOXA13P31271 388 aaPredicted RBP12.53□□□□□ -0.4
UBE2A-209ENST00000629303 PSEN2P49810 448 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 PTPN11Q06124 597 aaPredicted RBP12.53□□□□□ -0.4
UBE2A-209ENST00000629303 HSDL1Q3SXM5 330 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 GPATCH4Q5T3I0 446 aaKnown RBP12.53□□□□□ -0.4
UBE2A-209ENST00000629303 ZNF618Q5T7W0 954 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 B4GALNT3Q6L9W6 998 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 CYB5R4Q7L1T6 521 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 SMC5Q8IY18 1101 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 RGS22Q8NE09 1264 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 AFAP1L1Q8TED9 768 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 ANKS1AQ92625 1134 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 RILPL2Q969X0 211 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 TTC14Q96N46 770 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 RMDN3Q96TC7 470 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 GPHNQ9NQX3 736 aaPredicted RBP12.53□□□□□ -0.4
UBE2A-209ENST00000629303 PXMP2Q9NR77 195 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 ABCB11O95342 1321 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 RAD50Q92878 1312 aa12.53□□□□□ -0.4
UBE2A-209ENST00000629303 MYH7BA7E2Y1 1941 aa12.52□□□□□ -0.4
UBE2A-209ENST00000629303 LGR5O75473 907 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 BAIAP3O94812 1187 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 UBA1P22314 1058 aaKnown RBP12.52□□□□□ -0.41
UBE2A-209ENST00000629303 PLA2G5P39877 138 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 HSD17B4P51659 736 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 GHRHRQ02643 423 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 BFSP2Q13515 415 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 MFSD10Q14728 455 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 SEC23AQ15436 765 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 KIAA0753Q2KHM9 967 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 CWC27Q6UX04 472 aaKnown RBP12.52□□□□□ -0.41
UBE2A-209ENST00000629303 DGKHQ86XP1 1220 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 PHOSPHO2Q8TCD6 241 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 ESR2Q92731 530 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 MTMR8Q96EF0 704 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 ZSCAN10Q96SZ4 725 aaPredicted RBP12.52□□□□□ -0.41
UBE2A-209ENST00000629303 C17orf80Q9BSJ5 609 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 SUGCTQ9HAC7 445 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 VAT1LQ9HCJ6 419 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 ZSWIM5Q9P217 1185 aa12.52□□□□□ -0.41
UBE2A-209ENST00000629303 SUPT16HQ9Y5B9 1047 aaKnown RBP12.52□□□□□ -0.41
UBE2A-209ENST00000629303 GJB5O95377 273 aa12.51□□□□□ -0.41
UBE2A-209ENST00000629303 NR3C2P08235 984 aa12.51□□□□□ -0.41
UBE2A-209ENST00000629303 ACTN1P12814 892 aa12.51□□□□□ -0.41
UBE2A-209ENST00000629303 HOXC8P31273 242 aa12.51□□□□□ -0.41
UBE2A-209ENST00000629303 SEMA3FQ13275 785 aa12.51□□□□□ -0.41
UBE2A-209ENST00000629303 CNKSR3Q6P9H4 555 aa12.51□□□□□ -0.41
UBE2A-209ENST00000629303 RETREG2Q8NC44 543 aa12.51□□□□□ -0.41
UBE2A-209ENST00000629303 CAGE1Q8TC20 777 aa12.51□□□□□ -0.41
UBE2A-209ENST00000629303 NSUN6Q8TEA1 469 aaKnown RBP12.51□□□□□ -0.41
UBE2A-209ENST00000629303 EMID1Q96A84 441 aaPredicted RBP12.51□□□□□ -0.41
UBE2A-209ENST00000629303 PDCD2LQ9BRP1 358 aa12.51□□□□□ -0.41
UBE2A-209ENST00000629303 LRFN3Q9BTN0 628 aa12.51□□□□□ -0.41
UBE2A-209ENST00000629303 MAD2L2Q9UI95 211 aa12.51□□□□□ -0.41
UBE2A-209ENST00000629303 NOD1Q9Y239 953 aa12.51□□□□□ -0.41
UBE2A-209ENST00000629303 CYTH3O43739 400 aa12.5□□□□□ -0.41
UBE2A-209ENST00000629303 KPNA6O60684 536 aa12.5□□□□□ -0.41
UBE2A-209ENST00000629303 CFBP00751 764 aa12.5□□□□□ -0.41
UBE2A-209ENST00000629303 GSPT1P15170 499 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms