RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 FSD2A1L4K1 749 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 MEIS1O00470 390 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 NFIBO00712 420 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 MAFGO15525 162 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 HERVK_113P62684 666 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 GRIN1Q05586 938 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 SEMA3FQ13275 785 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 PWP2Q15269 919 aaKnown RBP13.31□□□□□ -0.28
LINC00963-220ENST00000625171 CALCRLQ16602 461 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 MUM1L1Q5H9M0 696 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 PCNX4Q63HM2 1172 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 SNRNP48Q6IEG0 339 aaKnown RBP13.31□□□□□ -0.28
LINC00963-220ENST00000625171 GADL1Q6ZQY3 521 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 SHCBP1Q8NEM2 672 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 HAS1Q92839 578 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 LENG9Q96B70 501 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 CCDC34Q96HJ3 373 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 CUEDC2Q9H467 287 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 RNF146Q9NTX7 359 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 RIPK3Q9Y572 518 aa13.31□□□□□ -0.28
LINC00963-220ENST00000625171 IGLV3-22A0A075B6J6 115 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 VWA3AA6NCI4 1184 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 STAM2O75886 525 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 TDP2O95551 362 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 CAVIN2O95810 425 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 SLFN14P0C7P3 912 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 HOXA13P31271 388 aaPredicted RBP13.3□□□□□ -0.28
LINC00963-220ENST00000625171 GCLCP48506 637 aaPredicted RBP13.3□□□□□ -0.28
LINC00963-220ENST00000625171 RPS6P62753 249 aaKnown RBP13.3□□□□□ -0.28
LINC00963-220ENST00000625171 TMEM266Q2M3C6 531 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 CEP55Q53EZ4 464 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 KRBA2Q6ZNG9 492 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 RNF207Q6ZRF8 634 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 DNERQ8NFT8 737 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 ETNPPLQ8TBG4 499 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 FUCA2Q9BTY2 467 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 SPATC1LQ9H0A9 340 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 TNMDQ9H2S6 317 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 BTBD7Q9P203 1132 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 RBPJLQ9UBG7 517 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 HOOK1Q9UJC3 728 aaKnown RBP13.3□□□□□ -0.28
LINC00963-220ENST00000625171 PCDHA12Q9UN75 941 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 MRVI1Q9Y6F6 885 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 SMCHD1A6NHR9 2005 aa13.3□□□□□ -0.28
LINC00963-220ENST00000625171 FAM86B1E9PN63 330 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 SLC37A4O43826 429 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 CNMDO75829 334 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 MYL1P05976 194 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 FAM86B2P0C5J1 330 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 TXLNAP40222 546 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 MDM2Q00987 491 aaPredicted RBP13.29□□□□□ -0.28
LINC00963-220ENST00000625171 SETQ01105 290 aaPredicted RBP13.29□□□□□ -0.28
LINC00963-220ENST00000625171 E2F4Q16254 413 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 HYIQ5T013 277 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 NT5DC1Q5TFE4 455 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 SH3RF1Q7Z6J0 888 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 POTEDQ86YR6 584 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 IQUBQ8NA54 791 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 SPATA20Q8TB22 786 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 SYMPKQ92797 1274 aaKnown RBP13.29□□□□□ -0.28
LINC00963-220ENST00000625171 IWS1Q96ST2 819 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 SDF4Q9BRK5 362 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 MROH8Q9H579 483 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 MAGEF1Q9HAY2 307 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 CYP39A1Q9NYL5 469 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 MORF4L1Q9UBU8 362 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 UBIAD1Q9Y5Z9 338 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 PFASO15067 1338 aa13.29□□□□□ -0.28
LINC00963-220ENST00000625171 MANSC4A6NHS7 340 aaPredicted RBP13.28□□□□□ -0.28
LINC00963-220ENST00000625171 MUTP22033 750 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 UBA7P41226 1012 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 LONRF3Q496Y0 759 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 USP49Q70CQ1 688 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 VSIG10LQ86VR7 867 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 FCHSD1Q86WN1 690 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 NSUN6Q8TEA1 469 aaKnown RBP13.28□□□□□ -0.28
LINC00963-220ENST00000625171 BRI3BPQ8WY22 251 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 EPSTI1Q96J88 318 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 RIT2Q99578 217 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 MXRA8Q9BRK3 442 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 GZF1Q9H116 711 aaPredicted RBP13.28□□□□□ -0.28
LINC00963-220ENST00000625171 TTC12Q9H892 705 aaPredicted RBP13.28□□□□□ -0.28
LINC00963-220ENST00000625171 A1CFQ9NQ94 594 aaKnown RBP13.28□□□□□ -0.28
LINC00963-220ENST00000625171 COL20A1Q9P218 1284 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 KIAA1468Q9P260 1216 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 CCDC39Q9UFE4 941 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 TUBE1Q9UJT0 475 aa13.28□□□□□ -0.28
LINC00963-220ENST00000625171 MYH7BA7E2Y1 1941 aa13.27□□□□□ -0.28
LINC00963-220ENST00000625171 CCL15-CCL14A0A0B4J2E2 113 aa13.27□□□□□ -0.29
LINC00963-220ENST00000625171 SYCE3A1L190 88 aa13.27□□□□□ -0.29
LINC00963-220ENST00000625171 BTBD19C9JJ37 291 aa13.27□□□□□ -0.29
LINC00963-220ENST00000625171 POLR2DO15514 142 aaKnown RBP13.27□□□□□ -0.29
LINC00963-220ENST00000625171 ACTN4O43707 911 aaKnown RBP13.27□□□□□ -0.29
LINC00963-220ENST00000625171 SPIRE1Q08AE8 756 aa13.27□□□□□ -0.29
LINC00963-220ENST00000625171 BAATQ14032 418 aaPredicted RBP13.27□□□□□ -0.29
LINC00963-220ENST00000625171 CCL15Q16663 113 aa13.27□□□□□ -0.29
LINC00963-220ENST00000625171 B3GNT9Q6UX72 402 aa13.27□□□□□ -0.29
LINC00963-220ENST00000625171 RASAL3Q86YV0 1011 aa13.27□□□□□ -0.29
LINC00963-220ENST00000625171 ABRAQ8N0Z2 381 aa13.27□□□□□ -0.29
LINC00963-220ENST00000625171 SLC5A5Q92911 643 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms