RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 ZNF76P36508 570 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 GCLCP48506 637 aaPredicted RBP12.06□□□□□ -0.48
CPNE3-212ENST00000621783 PGM5Q15124 567 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 Q3C1V9 767 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 ZSCAN23Q3MJ62 389 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 PRR16Q569H4 304 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 PCNX4Q63HM2 1172 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 USP49Q70CQ1 688 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 ANKRD35Q8N283 1001 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 SHCBP1Q8NEM2 672 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 ETNPPLQ8TBG4 499 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 HAS1Q92839 578 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 CCDC102AQ96A19 550 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 PDCD2LQ9BRP1 358 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 NUP62CLQ9H1M0 184 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 R3HDMLQ9H3Y0 253 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 CLSTN2Q9H4D0 955 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 ZCCHC17Q9NP64 241 aaKnown RBP12.06□□□□□ -0.48
CPNE3-212ENST00000621783 MORF4L1Q9UBU8 362 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 PLXNB2O15031 1838 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 ADGRA2Q96PE1 1338 aa12.06□□□□□ -0.48
CPNE3-212ENST00000621783 TXKP42681 527 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 SYKP43405 635 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 FXR2P51116 673 aaKnown RBP eCLIP12.05□□□□□ -0.48
CPNE3-212ENST00000621783 SETQ01105 290 aaPredicted RBP12.05□□□□□ -0.48
CPNE3-212ENST00000621783 SREBF2Q12772 1141 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 TMEM266Q2M3C6 531 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 ARHGEF16Q5VV41 709 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 ANKRD13CQ8N6S4 541 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 GPRC5AQ8NFJ5 357 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 CYP2W1Q8TAV3 490 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 GJA10Q969M2 543 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 EPSTI1Q96J88 318 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 ZFP91Q96JP5 570 aaPredicted RBP12.05□□□□□ -0.48
CPNE3-212ENST00000621783 RMDN3Q96TC7 470 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 PORCNQ9H237 461 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 MROH8Q9H579 483 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 KCNH3Q9ULD8 1083 aa12.05□□□□□ -0.48
CPNE3-212ENST00000621783 A0A087X0B3 334 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 PP2D1A8MPX8 630 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 TBX3O15119 743 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 MSH4O15457 936 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 ZNF202O95125 648 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 CCND2P30279 289 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 TECP42680 631 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 CCNA1P78396 465 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 MRPS9P82933 396 aaKnown RBP12.04□□□□□ -0.48
CPNE3-212ENST00000621783 FAM110CQ1W6H9 321 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 CEP55Q53EZ4 464 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 CYP4F22Q6NT55 531 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 PAXIP1Q6ZW49 1069 aaPredicted RBP12.04□□□□□ -0.48
CPNE3-212ENST00000621783 PLA2G4DQ86XP0 818 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 IFNL1Q8IU54 200 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 IGSF22Q8N9C0 903 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 AK8Q96MA6 479 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 UIMC1Q96RL1 719 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 MMP19Q99542 508 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 MXRA8Q9BRK3 442 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 TNMDQ9H2S6 317 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 TTC12Q9H892 705 aaPredicted RBP12.04□□□□□ -0.48
CPNE3-212ENST00000621783 EFCC1Q9HA90 598 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 UBIAD1Q9Y5Z9 338 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 ASTN1O14525 1302 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 ZNF236Q9UL36 1845 aa12.04□□□□□ -0.48
CPNE3-212ENST00000621783 SYCE3A1L190 88 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 POTEMA6NI47 508 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 POTEB2H3BUK9 544 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 MEIS1O00470 390 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 MARCH6O60337 910 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 MYCLP12524 364 aaPredicted RBP12.03□□□□□ -0.48
CPNE3-212ENST00000621783 ITGB5P18084 799 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 TXLNAP40222 546 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 ALDH5A1P51649 535 aaPredicted RBP12.03□□□□□ -0.48
CPNE3-212ENST00000621783 INHBEP58166 350 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 CNTN2Q02246 1040 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 GRM1Q13255 1194 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 TAF1CQ15572 869 aaPredicted RBP12.03□□□□□ -0.48
CPNE3-212ENST00000621783 CAMK4Q16566 473 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 WDR78Q5VTH9 848 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 XRRA1Q6P2D8 792 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 NIPA1Q7RTP0 329 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 SLFN12Q8IYM2 578 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 FAM133AQ8N9E0 248 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 DNERQ8NFT8 737 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 NSUN6Q8TEA1 469 aaKnown RBP12.03□□□□□ -0.48
CPNE3-212ENST00000621783 SLC5A5Q92911 643 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 FAM20AQ96MK3 541 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 TIGD1Q96MW7 591 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 RAB34Q9BZG1 259 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 JADE2Q9NQC1 790 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 CREBZFQ9NS37 354 aa12.03□□□□□ -0.48
CPNE3-212ENST00000621783 DNAJC25-GNG10A0A024R161 153 aa12.02□□□□□ -0.49
CPNE3-212ENST00000621783 SOWAHBA6NEL2 793 aa12.02□□□□□ -0.49
CPNE3-212ENST00000621783 RASSF10A6NK89 507 aa12.02□□□□□ -0.49
CPNE3-212ENST00000621783 POLR2DO15514 142 aaKnown RBP12.02□□□□□ -0.49
CPNE3-212ENST00000621783 ACTN4O43707 911 aaKnown RBP12.02□□□□□ -0.49
CPNE3-212ENST00000621783 NR3C2P08235 984 aa12.02□□□□□ -0.49
CPNE3-212ENST00000621783 ARP10275 920 aa12.02□□□□□ -0.49
CPNE3-212ENST00000621783 BCRP11274 1271 aa12.02□□□□□ -0.49
CPNE3-212ENST00000621783 CDC25AP30304 524 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms