RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 HSCBQ8IWL3 235 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 OR6J1Q8NGC5 347 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 NSUN6Q8TEA1 469 aaKnown RBP5.27□□□□□ -1.57
SYCP1-210ENST00000618516 C8orf76Q96K31 380 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 PANK2Q9BZ23 570 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 FTOQ9C0B1 505 aaKnown RBP eCLIP5.27□□□□□ -1.57
SYCP1-210ENST00000618516 GINM1Q9NU53 330 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 ADD3Q9UEY8 706 aaKnown RBP5.27□□□□□ -1.57
SYCP1-210ENST00000618516 FBXO40Q9UH90 709 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 PCDHA6Q9UN73 950 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 PCDHA8Q9Y5H6 950 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 BRWD1Q9NSI6 2320 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 COL2A1P02458 1487 aaPredicted RBP5.27□□□□□ -1.57
SYCP1-210ENST00000618516 CHD9Q3L8U1 2897 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 RPTORQ8N122 1335 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 PHIPQ8WWQ0 1821 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 CCNT1O60563 726 aaKnown RBP5.27□□□□□ -1.57
SYCP1-210ENST00000618516 CYP2C9P11712 490 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 ZNF174Q15697 407 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 STXBP2Q15833 593 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 LONRF3Q496Y0 759 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 SPECC1Q5M775 1068 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 SGMS1Q86VZ5 419 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 CHST13Q8NET6 341 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 SHISA4Q96DD7 197 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 SPATA33Q96N06 139 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 AP5M1Q9H0R1 490 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 SPC25Q9HBM1 224 aa5.27□□□□□ -1.57
SYCP1-210ENST00000618516 PTPRFP10586 1907 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 EVI5O60447 810 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 IGSF3O75054 1194 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 ASGR1P07306 291 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 MRPL12P52815 198 aaKnown RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 ZNF200P98182 395 aaPredicted RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 SP2Q02086 613 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 RAD51AP2Q09MP3 1159 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 ST3GAL1Q11201 340 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 PKP1Q13835 747 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 KCNA10Q16322 511 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 PKN1Q16512 942 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 DEFB128Q7Z7B8 93 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 DIS3L2Q8IYB7 885 aaKnown RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 RASSF8Q8NHQ8 419 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 TBCKQ8TEA7 893 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 TRAPPC12Q8WVT3 735 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 PDCD2LQ9BRP1 358 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 ANO3Q9BYT9 981 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 FAM49AQ9H0Q0 323 aaPredicted RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 RIOX1Q9H6W3 641 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 PXMP2Q9NR77 195 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 PLIN4Q96Q06 1357 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 KBTBD13C9JR72 458 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 STXBP3O00186 592 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 MEIS2O14770 477 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 CSDE1O75534 798 aaKnown RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 SGPL1O95470 568 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 ARP10275 920 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 AKR1A1P14550 325 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 MLLT1Q03111 559 aaPredicted RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 MTMR1Q13613 665 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 PGM5Q15124 567 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 RABEP1Q15276 862 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 ZNF792Q3KQV3 632 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 LARP1BQ659C4 914 aaKnown RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 MCF2L2Q86YR7 1114 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 NSUN7Q8NE18 718 aaKnown RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 GTF3C6Q969F1 213 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 FGD4Q96M96 766 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 C6orf50Q9HD87 102 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 STARD7Q9NQZ5 370 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 TRMT13Q9NUP7 481 aaKnown RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 RBM28Q9NW13 759 aaKnown RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 TFIP11Q9UBB9 837 aaKnown RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 DDX20Q9UHI6 824 aaKnown RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 SLC45A1Q9Y2W3 748 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 WNT7AO00755 349 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 SSBP05455 408 aaKnown RBP eCLIP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 ACRP10323 421 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 FDPSP14324 419 aaKnown RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 TXKP42681 527 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 MRPS9P82933 396 aaKnown RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 ANKRD1Q15327 319 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 TRIM60Q495X7 471 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 KRT40Q6A162 431 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 TMCO2Q7Z6W1 182 aaPredicted RBP5.26□□□□□ -1.57
SYCP1-210ENST00000618516 FAM133AQ8N9E0 248 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 SCLT1Q96NL6 688 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 TRPV6Q9H1D0 765 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 ABHD16BQ9H3Z7 469 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 GDPD2Q9HCC8 539 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 BARHL2Q9NY43 387 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 FAM184BQ9ULE4 1060 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 ADAMTS5Q9UNA0 930 aa5.26□□□□□ -1.57
SYCP1-210ENST00000618516 VPS13AQ96RL7 3174 aa5.25□□□□□ -1.57
SYCP1-210ENST00000618516 SEPT4O43236 478 aa5.25□□□□□ -1.57
SYCP1-210ENST00000618516 GJB1P08034 283 aa5.25□□□□□ -1.57
SYCP1-210ENST00000618516 XBP1P17861 261 aa5.25□□□□□ -1.57
SYCP1-210ENST00000618516 ITGB5P18084 799 aa5.25□□□□□ -1.57
SYCP1-210ENST00000618516 ARHGAP4P98171 946 aa5.25□□□□□ -1.57
SYCP1-210ENST00000618516 LRRC41Q15345 812 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms