RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 UMODL1Q5DID0 1318 aa26.31■■□□□ 1.8
FAM228B-208ENST00000613899 SMARCA1P28370 1054 aa26.3■■□□□ 1.8
FAM228B-208ENST00000613899 GNAQP50148 359 aa26.3■■□□□ 1.8
FAM228B-208ENST00000613899 C16orf59Q7L2K0 433 aa26.3■■□□□ 1.8
FAM228B-208ENST00000613899 SKAP1Q86WV1 359 aa26.3■■□□□ 1.8
FAM228B-208ENST00000613899 EMID1Q96A84 441 aaPredicted RBP26.3■■□□□ 1.8
FAM228B-208ENST00000613899 RRP36Q96EU6 259 aaKnown RBP26.3■■□□□ 1.8
FAM228B-208ENST00000613899 GUCD1Q96NT3 240 aa26.3■■□□□ 1.8
FAM228B-208ENST00000613899 LZTS2Q9BRK4 669 aa26.3■■□□□ 1.8
FAM228B-208ENST00000613899 MTIF3Q9H2K0 278 aaKnown RBP26.3■■□□□ 1.8
FAM228B-208ENST00000613899 DDX41Q9UJV9 622 aaKnown RBP26.3■■□□□ 1.8
FAM228B-208ENST00000613899 CALM1P0DP23 149 aa26.29■■□□□ 1.8
FAM228B-208ENST00000613899 CALM2P0DP24 149 aa26.29■■□□□ 1.8
FAM228B-208ENST00000613899 CALM3P0DP25 149 aa26.29■■□□□ 1.8
FAM228B-208ENST00000613899 ACRP10323 421 aa26.29■■□□□ 1.8
FAM228B-208ENST00000613899 MYCLP12524 364 aaPredicted RBP26.29■■□□□ 1.8
FAM228B-208ENST00000613899 LIFRP42702 1097 aa26.29■■□□□ 1.8
FAM228B-208ENST00000613899 PGM5Q15124 567 aa26.29■■□□□ 1.8
FAM228B-208ENST00000613899 KCNV1Q6PIU1 500 aa26.29■■□□□ 1.8
FAM228B-208ENST00000613899 WNT8AQ9H1J5 351 aa26.29■■□□□ 1.8
FAM228B-208ENST00000613899 SEC63Q9UGP8 760 aaKnown RBP26.29■■□□□ 1.8
FAM228B-208ENST00000613899 CASTP20810 708 aaKnown RBP26.28■■□□□ 1.8
FAM228B-208ENST00000613899 CCND2P30279 289 aa26.28■■□□□ 1.8
FAM228B-208ENST00000613899 CCL23P55773 120 aa26.28■■□□□ 1.8
FAM228B-208ENST00000613899 RASIP1Q5U651 963 aa26.28■■□□□ 1.8
FAM228B-208ENST00000613899 ZNF365Q70YC5 407 aa26.28■■□□□ 1.8
FAM228B-208ENST00000613899 MYH7BA7E2Y1 1941 aa26.27■■□□□ 1.8
FAM228B-208ENST00000613899 CDC45O75419 566 aa26.27■■□□□ 1.8
FAM228B-208ENST00000613899 LAMC2Q13753 1193 aa26.27■■□□□ 1.8
FAM228B-208ENST00000613899 DGKDQ16760 1214 aa26.27■■□□□ 1.8
FAM228B-208ENST00000613899 VSIG10LQ86VR7 867 aa26.27■■□□□ 1.8
FAM228B-208ENST00000613899 FCHSD1Q86WN1 690 aa26.27■■□□□ 1.8
FAM228B-208ENST00000613899 PIBF1Q8WXW3 757 aa26.27■■□□□ 1.8
FAM228B-208ENST00000613899 SEMA6BQ9H3T3 888 aa26.27■■□□□ 1.8
FAM228B-208ENST00000613899 TANC1Q9C0D5 1861 aa26.27■■□□□ 1.8
FAM228B-208ENST00000613899 CYP2C9P11712 490 aa26.26■■□□□ 1.79
FAM228B-208ENST00000613899 DNAJB2P25686 324 aa26.26■■□□□ 1.79
FAM228B-208ENST00000613899 DHX37Q8IY37 1157 aaKnown RBP26.26■■□□□ 1.79
FAM228B-208ENST00000613899 RPUSD2Q8IZ73 545 aaKnown RBP26.26■■□□□ 1.79
FAM228B-208ENST00000613899 IL31RAQ8NI17 732 aa26.26■■□□□ 1.79
FAM228B-208ENST00000613899 PPTC7Q8NI37 304 aa26.26■■□□□ 1.79
FAM228B-208ENST00000613899 HERVK_113Q902F9 699 aa26.26■■□□□ 1.79
FAM228B-208ENST00000613899 SLC12A7Q9Y666 1083 aa26.26■■□□□ 1.79
FAM228B-208ENST00000613899 FRMPD4Q14CM0 1322 aa26.25■■□□□ 1.79
FAM228B-208ENST00000613899 RGS20O76081 388 aa26.25■■□□□ 1.79
FAM228B-208ENST00000613899 FGBP02675 491 aa26.25■■□□□ 1.79
FAM228B-208ENST00000613899 SLC17A8Q8NDX2 589 aa26.25■■□□□ 1.79
FAM228B-208ENST00000613899 KATNAL1Q9BW62 490 aa26.25■■□□□ 1.79
FAM228B-208ENST00000613899 TTYH1Q9H313 450 aaPredicted RBP26.25■■□□□ 1.79
FAM228B-208ENST00000613899 NOD1Q9Y239 953 aa26.25■■□□□ 1.79
FAM228B-208ENST00000613899 PLEKHA8P1O95397 391 aa26.24■■□□□ 1.79
FAM228B-208ENST00000613899 PFKMP08237 780 aa26.24■■□□□ 1.79
FAM228B-208ENST00000613899 TGFB3P10600 412 aa26.24■■□□□ 1.79
FAM228B-208ENST00000613899 CHMP4BP1P59074 171 aa26.24■■□□□ 1.79
FAM228B-208ENST00000613899 COL9A3Q14050 684 aaPredicted RBP26.24■■□□□ 1.79
FAM228B-208ENST00000613899 SESTD1Q86VW0 696 aa26.24■■□□□ 1.79
FAM228B-208ENST00000613899 SGMS1Q86VZ5 419 aa26.24■■□□□ 1.79
FAM228B-208ENST00000613899 CUL5Q93034 780 aa26.24■■□□□ 1.79
FAM228B-208ENST00000613899 CDX2Q99626 313 aaPredicted RBP26.24■■□□□ 1.79
FAM228B-208ENST00000613899 PITPNM1O00562 1244 aa26.23■■□□□ 1.79
FAM228B-208ENST00000613899 STAM2O75886 525 aa26.23■■□□□ 1.79
FAM228B-208ENST00000613899 RXRAP19793 462 aa26.23■■□□□ 1.79
FAM228B-208ENST00000613899 SRBD1Q8N5C6 995 aaKnown RBP26.23■■□□□ 1.79
FAM228B-208ENST00000613899 SMARCC2Q8TAQ2 1214 aa26.23■■□□□ 1.79
FAM228B-208ENST00000613899 KAT2BQ92831 832 aa26.23■■□□□ 1.79
FAM228B-208ENST00000613899 SCLYQ96I15 445 aa26.23■■□□□ 1.79
FAM228B-208ENST00000613899 CCDC136Q96JN2 1154 aa26.23■■□□□ 1.79
FAM228B-208ENST00000613899 NEK1Q96PY6 1258 aa26.23■■□□□ 1.79
FAM228B-208ENST00000613899 LRRC2Q9BYS8 371 aa26.23■■□□□ 1.79
FAM228B-208ENST00000613899 BFSP2Q13515 415 aa26.22■■□□□ 1.79
FAM228B-208ENST00000613899 GNPTABQ3T906 1256 aa26.22■■□□□ 1.79
FAM228B-208ENST00000613899 CELF3Q5SZQ8 465 aaKnown RBP26.22■■□□□ 1.79
FAM228B-208ENST00000613899 CCDC155Q8N6L0 562 aa26.22■■□□□ 1.79
FAM228B-208ENST00000613899 PPP1R13LQ8WUF5 828 aa26.22■■□□□ 1.79
FAM228B-208ENST00000613899 PIK3CDO00329 1044 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 GGPS1O95749 300 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 F2P00734 622 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 UBA1P22314 1058 aaKnown RBP26.21■■□□□ 1.79
FAM228B-208ENST00000613899 RFC2P35250 354 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 PTGISQ16647 500 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 MYSM1Q5VVJ2 828 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 SYNE3Q6ZMZ3 975 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 OTOP2Q7RTS6 562 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 MICU3Q86XE3 530 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 RETREG2Q8NC44 543 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 TIFAQ96CG3 184 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 SPATA33Q96N06 139 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 SCN5AQ14524 2016 aa26.21■■□□□ 1.79
FAM228B-208ENST00000613899 HOXD8P13378 290 aaPredicted RBP26.2■■□□□ 1.78
FAM228B-208ENST00000613899 KRT32Q14532 448 aa26.2■■□□□ 1.78
FAM228B-208ENST00000613899 TMTC3Q6ZXV5 915 aa26.2■■□□□ 1.78
FAM228B-208ENST00000613899 FANCBQ8NB91 859 aa26.2■■□□□ 1.78
FAM228B-208ENST00000613899 CAGE1Q8TC20 777 aa26.2■■□□□ 1.78
FAM228B-208ENST00000613899 PBX4Q9BYU1 374 aa26.2■■□□□ 1.78
FAM228B-208ENST00000613899 CXXC1Q9P0U4 656 aaPredicted RBP26.2■■□□□ 1.78
FAM228B-208ENST00000613899 ZNF286BP0CG31 522 aa26.19■■□□□ 1.78
FAM228B-208ENST00000613899 PSEN2P49810 448 aa26.19■■□□□ 1.78
FAM228B-208ENST00000613899 MFSD10Q14728 455 aa26.19■■□□□ 1.78
FAM228B-208ENST00000613899 RAB30Q15771 203 aa26.19■■□□□ 1.78
FAM228B-208ENST00000613899 TSGA10IPQ3SY00 556 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms