RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 HOXA13P31271 388 aaPredicted RBP20.1■□□□□ 0.81
PRKN-209ENST00000612485 RASIP1Q5U651 963 aa20.1■□□□□ 0.81
PRKN-209ENST00000612485 KCNV1Q6PIU1 500 aa20.1■□□□□ 0.81
PRKN-209ENST00000612485 RPUSD2Q8IZ73 545 aaKnown RBP20.1■□□□□ 0.81
PRKN-209ENST00000612485 HERVK_113Q902F9 699 aa20.1■□□□□ 0.81
PRKN-209ENST00000612485 TTYH1Q9H313 450 aaPredicted RBP20.1■□□□□ 0.81
PRKN-209ENST00000612485 MYCLP12524 364 aaPredicted RBP20.09■□□□□ 0.81
PRKN-209ENST00000612485 CASTP20810 708 aaKnown RBP20.09■□□□□ 0.81
PRKN-209ENST00000612485 DNAJB2P25686 324 aa20.09■□□□□ 0.81
PRKN-209ENST00000612485 GNAQP50148 359 aa20.09■□□□□ 0.81
PRKN-209ENST00000612485 LAMC2Q13753 1193 aa20.09■□□□□ 0.81
PRKN-209ENST00000612485 CREB3L3Q68CJ9 461 aa20.09■□□□□ 0.81
PRKN-209ENST00000612485 NFXL1Q6ZNB6 911 aa20.09■□□□□ 0.81
PRKN-209ENST00000612485 EMID1Q96A84 441 aaPredicted RBP20.09■□□□□ 0.81
PRKN-209ENST00000612485 CDX2Q99626 313 aaPredicted RBP20.09■□□□□ 0.81
PRKN-209ENST00000612485 LZTS2Q9BRK4 669 aa20.09■□□□□ 0.81
PRKN-209ENST00000612485 SPZ1Q9BXG8 430 aa20.09■□□□□ 0.81
PRKN-209ENST00000612485 WNT8AQ9H1J5 351 aa20.09■□□□□ 0.81
PRKN-209ENST00000612485 KIAA1217Q5T5P2 1943 aa20.09■□□□□ 0.81
PRKN-209ENST00000612485 CCDC69A6NI79 296 aa20.08■□□□□ 0.81
PRKN-209ENST00000612485 SH2B2O14492 632 aaPredicted RBP20.08■□□□□ 0.81
PRKN-209ENST00000612485 CYP2C9P11712 490 aa20.08■□□□□ 0.81
PRKN-209ENST00000612485 SMARCA1P28370 1054 aa20.08■□□□□ 0.81
PRKN-209ENST00000612485 PGM5Q15124 567 aa20.08■□□□□ 0.81
PRKN-209ENST00000612485 NECTIN1Q15223 517 aa20.08■□□□□ 0.81
PRKN-209ENST00000612485 DGKDQ16760 1214 aa20.08■□□□□ 0.81
PRKN-209ENST00000612485 VSIG10LQ86VR7 867 aa20.08■□□□□ 0.81
PRKN-209ENST00000612485 RRP36Q96EU6 259 aaKnown RBP20.08■□□□□ 0.81
PRKN-209ENST00000612485 MYL10Q9BUA6 226 aa20.08■□□□□ 0.81
PRKN-209ENST00000612485 NOD1Q9Y239 953 aa20.08■□□□□ 0.81
PRKN-209ENST00000612485 BAZ2BQ9UIF8 2168 aaKnown RBP20.07■□□□□ 0.8
PRKN-209ENST00000612485 PFKMP08237 780 aa20.07■□□□□ 0.8
PRKN-209ENST00000612485 CALM1P0DP23 149 aa20.07■□□□□ 0.8
PRKN-209ENST00000612485 CALM2P0DP24 149 aa20.07■□□□□ 0.8
PRKN-209ENST00000612485 CALM3P0DP25 149 aa20.07■□□□□ 0.8
PRKN-209ENST00000612485 CCND2P30279 289 aa20.07■□□□□ 0.8
PRKN-209ENST00000612485 LIFRP42702 1097 aa20.07■□□□□ 0.8
PRKN-209ENST00000612485 CHMP4BP1P59074 171 aa20.07■□□□□ 0.8
PRKN-209ENST00000612485 RNF20Q5VTR2 975 aa20.07■□□□□ 0.8
PRKN-209ENST00000612485 FCHSD1Q86WN1 690 aa20.07■□□□□ 0.8
PRKN-209ENST00000612485 DHX37Q8IY37 1157 aaKnown RBP20.07■□□□□ 0.8
PRKN-209ENST00000612485 PIBF1Q8WXW3 757 aa20.07■□□□□ 0.8
PRKN-209ENST00000612485 TIFAQ96CG3 184 aa20.07■□□□□ 0.8
PRKN-209ENST00000612485 SCLYQ96I15 445 aa20.07■□□□□ 0.8
PRKN-209ENST00000612485 SEC63Q9UGP8 760 aaKnown RBP20.07■□□□□ 0.8
PRKN-209ENST00000612485 RETREG2Q8NC44 543 aa20.06■□□□□ 0.8
PRKN-209ENST00000612485 PPTC7Q8NI37 304 aa20.06■□□□□ 0.8
PRKN-209ENST00000612485 KATNAL1Q9BW62 490 aa20.06■□□□□ 0.8
PRKN-209ENST00000612485 PITPNM1O00562 1244 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 RGS20O76081 388 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 TGFB3P10600 412 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 RFC2P35250 354 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 BFSP2Q13515 415 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 OTOP2Q7RTS6 562 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 SESTD1Q86VW0 696 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 SKAP1Q86WV1 359 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 IL31RAQ8NI17 732 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 PPP1R13LQ8WUF5 828 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 KAT2BQ92831 832 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 CUL5Q93034 780 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 PBX4Q9BYU1 374 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 SLC12A7Q9Y666 1083 aa20.05■□□□□ 0.8
PRKN-209ENST00000612485 GRXCR1A8MXD5 290 aa20.04■□□□□ 0.8
PRKN-209ENST00000612485 STAM2O75886 525 aa20.04■□□□□ 0.8
PRKN-209ENST00000612485 RAB30Q15771 203 aa20.04■□□□□ 0.8
PRKN-209ENST00000612485 PTGISQ16647 500 aa20.04■□□□□ 0.8
PRKN-209ENST00000612485 GNPTABQ3T906 1256 aa20.04■□□□□ 0.8
PRKN-209ENST00000612485 CELF3Q5SZQ8 465 aaKnown RBP20.04■□□□□ 0.8
PRKN-209ENST00000612485 CCDC155Q8N6L0 562 aa20.04■□□□□ 0.8
PRKN-209ENST00000612485 MYLIPQ8WY64 445 aa20.04■□□□□ 0.8
PRKN-209ENST00000612485 ZNF576Q9H609 170 aa20.04■□□□□ 0.8
PRKN-209ENST00000612485 CXXC1Q9P0U4 656 aaPredicted RBP20.04■□□□□ 0.8
PRKN-209ENST00000612485 MSRAQ9UJ68 235 aa20.04■□□□□ 0.8
PRKN-209ENST00000612485 CDH23Q9H251 3354 aa20.03■□□□□ 0.8
PRKN-209ENST00000612485 PLEKHA8P1O95397 391 aa20.03■□□□□ 0.8
PRKN-209ENST00000612485 GGPS1O95749 300 aa20.03■□□□□ 0.8
PRKN-209ENST00000612485 FOSL2P15408 326 aa20.03■□□□□ 0.8
PRKN-209ENST00000612485 PSEN2P49810 448 aa20.03■□□□□ 0.8
PRKN-209ENST00000612485 MYSM1Q5VVJ2 828 aa20.03■□□□□ 0.8
PRKN-209ENST00000612485 SRBD1Q8N5C6 995 aaKnown RBP20.03■□□□□ 0.8
PRKN-209ENST00000612485 SMARCC2Q8TAQ2 1214 aa20.03■□□□□ 0.8
PRKN-209ENST00000612485 SPATA33Q96N06 139 aa20.03■□□□□ 0.8
PRKN-209ENST00000612485 SLC4A7Q9Y6M7 1214 aa20.03■□□□□ 0.8
PRKN-209ENST00000612485 FRMPD4Q14CM0 1322 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 PPFIA4O75335 1185 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 CDC45O75419 566 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 F2P00734 622 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 ACTN1P12814 892 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 HOXD8P13378 290 aaPredicted RBP20.02■□□□□ 0.8
PRKN-209ENST00000612485 RXRAP19793 462 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 UBA1P22314 1058 aaKnown RBP20.02■□□□□ 0.8
PRKN-209ENST00000612485 PBX2P40425 430 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 GDF6Q6KF10 455 aaPredicted RBP20.02■□□□□ 0.8
PRKN-209ENST00000612485 SYNE3Q6ZMZ3 975 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 DEFB128Q7Z7B8 93 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 SGMS1Q86VZ5 419 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 C7orf31Q8N865 590 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 CAGE1Q8TC20 777 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 LRRC2Q9BYS8 371 aa20.02■□□□□ 0.8
PRKN-209ENST00000612485 MLXIPQ9HAP2 919 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms