RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 EXOC3L4Q17RC7 722 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 QRICH1Q2TAL8 776 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 CFAP221Q4G0U5 840 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 CCDC93Q567U6 631 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 SND1Q7KZF4 910 aaKnown RBP eCLIP14.48□□□□□ -0.09
TCF3-220ENST00000611869 BHMT2Q9H2M3 363 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 NDST4Q9H3R1 872 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 RASAL2Q9UJF2 1139 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 ZEB2O60315 1214 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 MYZAPP0CAP1 466 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 CHRNA5P30532 468 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 PPARDQ03181 441 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 FMNL3Q8IVF7 1028 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 AKAP12Q02952 1782 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 F5H6K3 240 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 SEC31AO94979 1220 aaKnown RBP14.48□□□□□ -0.09
TCF3-220ENST00000611869 KLRC3Q07444 240 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 WDR44Q5JSH3 913 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 SRGAP1Q7Z6B7 1085 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 CCDC25Q86WR0 208 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 TTLL6Q8N841 843 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 CCDC127Q96BQ5 260 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 MTMR4Q9NYA4 1195 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 E9PMD0 336 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 HSPA1LP34931 641 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 ZBED6P86452 979 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 SLC10A5Q5PT55 438 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 UBE2Q2Q8WVN8 375 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 RGPD8O14715 1765 aaPredicted RBP14.47□□□□□ -0.09
TCF3-220ENST00000611869 GBP2P32456 591 aaPredicted RBP14.47□□□□□ -0.09
TCF3-220ENST00000611869 SMC1AQ14683 1233 aaKnown RBP14.47□□□□□ -0.09
TCF3-220ENST00000611869 RETREG2Q8NC44 543 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 ATRIPQ8WXE1 791 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 CRAMP1Q96RY5 1269 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 SFI1A8K8P3 1242 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 BCRP11274 1271 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 PLCB3Q01970 1234 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 HPS3Q969F9 1004 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 SPZ1Q9BXG8 430 aa14.47□□□□□ -0.09
TCF3-220ENST00000611869 METTL14Q9HCE5 456 aaKnown RBP14.47□□□□□ -0.09
TCF3-220ENST00000611869 CCZ1BP86790 482 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 CCZ1P86791 482 aaPredicted RBP14.46□□□□□ -0.09
TCF3-220ENST00000611869 STRN3Q13033 797 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 HOOK3Q86VS8 718 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 SMAP1Q8IYB5 467 aaPredicted RBP14.46□□□□□ -0.09
TCF3-220ENST00000611869 SMIM22K7EJ46 135 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 FCER1AP12319 257 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 TOB1P50616 345 aaPredicted RBP14.46□□□□□ -0.09
TCF3-220ENST00000611869 NCBP1Q09161 790 aaKnown RBP14.46□□□□□ -0.09
TCF3-220ENST00000611869 MAPK8IP2Q13387 824 aaPredicted RBP14.46□□□□□ -0.09
TCF3-220ENST00000611869 CTTNQ14247 550 aaKnown RBP14.46□□□□□ -0.09
TCF3-220ENST00000611869 MTF1Q14872 753 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 UNC13DQ70J99 1090 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 RABGGTAQ92696 567 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 TMEM60Q9H2L4 133 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 MYO1AQ9UBC5 1043 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 POTEB3A0JP26 581 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 POTECB2RU33 542 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 DKC1O60832 514 aaKnown RBP eCLIP14.46□□□□□ -0.094e-7■■■■■ 30.4
TCF3-220ENST00000611869 PRPF6O94906 941 aaKnown RBP14.46□□□□□ -0.09
TCF3-220ENST00000611869 BRD3Q15059 726 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 POTEBQ6S5H4 581 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 HYOU1Q9Y4L1 999 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 FMN2Q9NZ56 1722 aa14.46□□□□□ -0.09
TCF3-220ENST00000611869 KCNK3O14649 394 aa14.46□□□□□ -0.1
TCF3-220ENST00000611869 EIF4A3P38919 411 aaKnown RBP14.46□□□□□ -0.1
TCF3-220ENST00000611869 SEC23AQ15436 765 aa14.46□□□□□ -0.1
TCF3-220ENST00000611869 KRT26Q7Z3Y9 468 aa14.46□□□□□ -0.1
TCF3-220ENST00000611869 ILDR1Q86SU0 546 aaPredicted RBP14.46□□□□□ -0.1
TCF3-220ENST00000611869 PIGOQ8TEQ8 1089 aa14.46□□□□□ -0.1
TCF3-220ENST00000611869 UBLCP1Q8WVY7 318 aaPredicted RBP14.46□□□□□ -0.1
TCF3-220ENST00000611869 ZNF408Q9H9D4 720 aa14.46□□□□□ -0.1
TCF3-220ENST00000611869 NHEJ1Q9H9Q4 299 aaPredicted RBP14.46□□□□□ -0.1
TCF3-220ENST00000611869 LGALS16A8MUM7 142 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 FAM83BQ5T0W9 1011 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 MCF2L2Q86YR7 1114 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 CCDC26Q8TAB7 109 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 NOP56O00567 594 aaKnown RBP14.45□□□□□ -0.1
TCF3-220ENST00000611869 ACTN4O43707 911 aaKnown RBP14.45□□□□□ -0.1
TCF3-220ENST00000611869 ARHGAP4P98171 946 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 MAP2K1Q02750 393 aaPredicted RBP14.45□□□□□ -0.1
TCF3-220ENST00000611869 DCAF15Q66K64 600 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 E4F1Q66K89 784 aaPredicted RBP14.45□□□□□ -0.1
TCF3-220ENST00000611869 FBXO38Q6PIJ6 1188 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 NBPF11Q86T75 865 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 FAM76AQ8TAV0 307 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 KIFAP3Q92845 792 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 PAGR1Q9BTK6 254 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 ABHD10Q9NUJ1 306 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 GINS2Q9Y248 185 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 ATF5Q9Y2D1 282 aaPredicted RBP14.45□□□□□ -0.1
TCF3-220ENST00000611869 ZMYND10O75800 440 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 EHHADHQ08426 723 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 SEL1L2Q5TEA6 688 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 RBM43Q6ZSC3 357 aaKnown RBP14.45□□□□□ -0.1
TCF3-220ENST00000611869 GSTA5Q7RTV2 222 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 CCDC155Q8N6L0 562 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 HOOK2Q96ED9 719 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 IL17RAQ96F46 866 aa14.45□□□□□ -0.1
TCF3-220ENST00000611869 MAP3K14Q99558 947 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms