RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 PIK3R5Q8WYR1 880 aa13.19□□□□□ -0.3
TP53-220ENST00000610623 ALS2CR12Q96Q35 445 aa13.19□□□□□ -0.3
TP53-220ENST00000610623 MYL10Q9BUA6 226 aa13.19□□□□□ -0.3
TP53-220ENST00000610623 THAP9Q9H5L6 903 aa13.19□□□□□ -0.3
TP53-220ENST00000610623 PIH1D3Q9NQM4 214 aaKnown RBP13.19□□□□□ -0.3
TP53-220ENST00000610623 XDHP47989 1333 aa13.19□□□□□ -0.3
TP53-220ENST00000610623 DNM1LO00429 736 aa13.19□□□□□ -0.3
TP53-220ENST00000610623 COBLO75128 1261 aa13.19□□□□□ -0.3
TP53-220ENST00000610623 DNAJC8O75937 253 aaPredicted RBP13.19□□□□□ -0.3
TP53-220ENST00000610623 SRGNP10124 158 aa13.19□□□□□ -0.3
TP53-220ENST00000610623 GHRP10912 638 aa13.19□□□□□ -0.3
TP53-220ENST00000610623 MATR3P43243 847 aaKnown RBP eCLIP13.19□□□□□ -0.3
TP53-220ENST00000610623 SH2D4AQ9H788 454 aa13.19□□□□□ -0.3
TP53-220ENST00000610623 HAUS2Q9NVX0 235 aa13.19□□□□□ -0.3
TP53-220ENST00000610623 VPS54Q9P1Q0 977 aa13.19□□□□□ -0.3
TP53-220ENST00000610623 KLHL33A6NCF5 533 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 C5orf60A6NFR6 353 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 GOLGA6L10A6NI86 522 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 IFIT3O14879 490 aaKnown RBP13.18□□□□□ -0.3
TP53-220ENST00000610623 PDE6AP16499 860 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 TRIM21P19474 475 aaKnown RBP13.18□□□□□ -0.3
TP53-220ENST00000610623 SCTRP47872 440 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 TBC1D8BQ0IIM8 1120 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 NAA25Q14CX7 972 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 CCDC96Q2M329 555 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 LRIG3Q6UXM1 1119 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 CRACR2BQ8N4Y2 399 aaPredicted RBP13.18□□□□□ -0.3
TP53-220ENST00000610623 SPATA5Q8NB90 893 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 NKX2-3Q8TAU0 364 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 IQCDQ96DY2 449 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 CCDC42Q96M95 316 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 A0A1W2PQJ5 194 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
TP53-220ENST00000610623 TRAPPC3O43617 180 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 IDH1O75874 414 aaKnown RBP13.18□□□□□ -0.3
TP53-220ENST00000610623 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.3
TP53-220ENST00000610623 MAP3K12Q12852 859 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 SLMAPQ14BN4 828 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 SF3B3Q15393 1217 aaKnown RBP13.18□□□□□ -0.3
TP53-220ENST00000610623 RTN1Q16799 776 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 FIGNQ5HY92 759 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 CRELD2Q6UXH1 353 aaPredicted RBP13.18□□□□□ -0.3
TP53-220ENST00000610623 HELBQ8NG08 1087 aaPredicted RBP13.18□□□□□ -0.3
TP53-220ENST00000610623 RNF217Q8TC41 542 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 TMBIM4Q9HC24 238 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 PPANQ9NQ55 473 aaKnown RBP13.18□□□□□ -0.3
TP53-220ENST00000610623 AGPAT5Q9NUQ2 364 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 LRWD1Q9UFC0 647 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 NFU1Q9UMS0 254 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 CAPN6Q9Y6Q1 641 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 ZNF532Q9HCE3 1301 aa13.18□□□□□ -0.3
TP53-220ENST00000610623 LY75O60449 1722 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 TCRBV5S4A2TA0A5A2 114 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 C2orf72A6NCS6 295 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 XBP1P17861 261 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 CARSP49589 748 aaKnown RBP13.17□□□□□ -0.3
TP53-220ENST00000610623 RCAN1P53805 252 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 CYP27A1Q02318 531 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 E2F5Q15329 346 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 ALX1Q15699 326 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 CFAP221Q4G0U5 840 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 CACNA2D3Q8IZS8 1091 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 NOC3LQ8WTT2 800 aaKnown RBP13.17□□□□□ -0.3
TP53-220ENST00000610623 MS4A3Q96HJ5 214 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 PHOX2BQ99453 314 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 BLZF1Q9H2G9 400 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 EXOC1Q9NV70 894 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 MAGEC2Q9UBF1 373 aaPredicted RBP13.17□□□□□ -0.3
TP53-220ENST00000610623 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
TP53-220ENST00000610623 SSBP05455 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
TP53-220ENST00000610623 PRCPP42785 496 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 CTDSPL2Q05D32 466 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 PDXDC2PQ6P474 469 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 NFRKBQ6P4R8 1299 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 EIF1ADQ8N9N8 165 aaKnown RBP13.17□□□□□ -0.3
TP53-220ENST00000610623 ZNF483Q8TF39 744 aaPredicted RBP13.17□□□□□ -0.3
TP53-220ENST00000610623 SEC16BQ96JE7 1060 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 IFIH1Q9BYX4 1025 aaKnown RBP13.17□□□□□ -0.3
TP53-220ENST00000610623 NYXQ9GZU5 481 aa13.17□□□□□ -0.3
TP53-220ENST00000610623 RBM12Q9NTZ6 932 aaKnown RBP13.17□□□□□ -0.3
TP53-220ENST00000610623 SPATS2LQ9NUQ6 558 aaKnown RBP13.17□□□□□ -0.3
TP53-220ENST00000610623 CHD4Q14839 1912 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 RPN1P04843 607 aaKnown RBP13.16□□□□□ -0.3
TP53-220ENST00000610623 GLI1P08151 1106 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 FAM153BP0C7A2 387 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 HSPA9P38646 679 aaKnown RBP13.16□□□□□ -0.3
TP53-220ENST00000610623 CDC37Q16543 378 aaPredicted RBP13.16□□□□□ -0.3
TP53-220ENST00000610623 FAM153CQ494X1 144 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 SLC10A5Q5PT55 438 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 ADSSL1Q8N142 457 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 STAMQ92783 540 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 SH3GL3Q99963 347 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 CNNM2Q9H8M5 875 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 EBF2Q9HAK2 575 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 EPB41L5Q9HCM4 733 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 PLCB1Q9NQ66 1216 aa13.16□□□□□ -0.3
TP53-220ENST00000610623 ZSWIM5Q9P217 1185 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms