RNA–Protein interactions for RNA: ENST00000610369.4

TARDBP-211, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-211ENST00000610369 CALM3P0DP25 149 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 DNAJB2P25686 324 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 LIFRP42702 1097 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 ARHGAP1Q07960 439 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 BFSP2Q13515 415 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 NECTIN1Q15223 517 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 FAM47CQ5HY64 1035 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 DHX37Q8IY37 1157 aaKnown RBP11.2□□□□□ -0.62
TARDBP-211ENST00000610369 ZNF654Q8IZM8 581 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 RETREG2Q8NC44 543 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 AFG1LQ8WV93 481 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 RRP36Q96EU6 259 aaKnown RBP11.2□□□□□ -0.62
TARDBP-211ENST00000610369 CDX2Q99626 313 aaPredicted RBP11.2□□□□□ -0.62
TARDBP-211ENST00000610369 SPZ1Q9BXG8 430 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 LSG1Q9H089 658 aaKnown RBP11.2□□□□□ -0.62
TARDBP-211ENST00000610369 LY9Q9HBG7 655 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 TRMT13Q9NUP7 481 aaKnown RBP11.2□□□□□ -0.62
TARDBP-211ENST00000610369 MRVI1Q9Y6F6 885 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 TAF6LQ9Y6J9 622 aa11.2□□□□□ -0.62
TARDBP-211ENST00000610369 CCDC69A6NI79 296 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 SLC27A2O14975 620 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 PRC1O43663 620 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 CYTH3O43739 400 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 PPFIA4O75335 1185 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 MMP3P08254 477 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 ACRP10323 421 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 CCND2P30279 289 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 RFC2P35250 354 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 CCL23P55773 120 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 ANTXR2P58335 489 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 PGM5Q15124 567 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 RAB30Q15771 203 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 GNPTABQ3T906 1256 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 NFXL1Q6ZNB6 911 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 SESTD1Q86VW0 696 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 PPTC7Q8NI37 304 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 KATNAL1Q9BW62 490 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 TTYH1Q9H313 450 aaPredicted RBP11.19□□□□□ -0.62
TARDBP-211ENST00000610369 ANO2Q9NQ90 1003 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 SEC63Q9UGP8 760 aaKnown RBP11.19□□□□□ -0.62
TARDBP-211ENST00000610369 MSRAQ9UJ68 235 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 NOD1Q9Y239 953 aa11.19□□□□□ -0.62
TARDBP-211ENST00000610369 A0A0C4DFX4 3053 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 UMODL1Q5DID0 1318 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 PARNO95453 639 aaKnown RBP11.18□□□□□ -0.62
TARDBP-211ENST00000610369 CYP2C9P11712 490 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 MYCLP12524 364 aaPredicted RBP11.18□□□□□ -0.62
TARDBP-211ENST00000610369 HOXA13P31271 388 aaPredicted RBP11.18□□□□□ -0.62
TARDBP-211ENST00000610369 PTGISQ16647 500 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 SLC35G1Q2M3R5 365 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 CREB3L3Q68CJ9 461 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 FCHSD1Q86WN1 690 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 CCDC155Q8N6L0 562 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 CUL5Q93034 780 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 TIFAQ96CG3 184 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 WNT8AQ9H1J5 351 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 ZNF576Q9H609 170 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 SLC12A7Q9Y666 1083 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 SLC4A7Q9Y6M7 1214 aa11.18□□□□□ -0.62
TARDBP-211ENST00000610369 PIK3CDO00329 1044 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 SH2B2O14492 632 aaPredicted RBP11.17□□□□□ -0.62
TARDBP-211ENST00000610369 RGS20O76081 388 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 ACTN1P12814 892 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 HOXD8P13378 290 aaPredicted RBP11.17□□□□□ -0.62
TARDBP-211ENST00000610369 CHMP4BP1P59074 171 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 CELF3Q5SZQ8 465 aaKnown RBP11.17□□□□□ -0.62
TARDBP-211ENST00000610369 MYSM1Q5VVJ2 828 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 XRRA1Q6P2D8 792 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 SYNE3Q6ZMZ3 975 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 OTOP2Q7RTS6 562 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 C7orf31Q8N865 590 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 CAGE1Q8TC20 777 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 SPATA33Q96N06 139 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 PBX4Q9BYU1 374 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 MLXIPQ9HAP2 919 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 LRRC37A2A6NM11 1700 aa11.17□□□□□ -0.62
TARDBP-211ENST00000610369 LCTP09848 1927 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 F2P00734 622 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 IQCF3P0C7M6 154 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 FOSL2P15408 326 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 HOXD11P31277 338 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-211ENST00000610369 NEDD9Q14511 834 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 TSGA10IPQ3SY00 556 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 SGMS1Q86VZ5 419 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 TEX2Q8IWB9 1127 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 FANCBQ8NB91 859 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 MAFAQ8NHW3 353 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-211ENST00000610369 SMARCC2Q8TAQ2 1214 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 AFAP1L1Q8TED9 768 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 PIBF1Q8WXW3 757 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 KAT2BQ92831 832 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 SCLYQ96I15 445 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 MYL10Q9BUA6 226 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 PSTPIP2Q9H939 334 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 SLC28A3Q9HAS3 691 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 CXXC1Q9P0U4 656 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-211ENST00000610369 GTF2IRD1Q9UHL9 959 aa11.16□□□□□ -0.62
TARDBP-211ENST00000610369 GRXCR1A8MXD5 290 aa11.15□□□□□ -0.62
TARDBP-211ENST00000610369 HAS3O00219 553 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms