RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 PLEKHM2Q8IWE5 1019 aa24.7■■□□□ 1.54
PNKP-212ENST00000599454 ENAHQ8N8S7 591 aaPredicted RBP24.7■■□□□ 1.54
PNKP-212ENST00000599454 PPP1R13LQ8WUF5 828 aa24.7■■□□□ 1.54
PNKP-212ENST00000599454 TBC1D5Q92609 795 aa24.7■■□□□ 1.54
PNKP-212ENST00000599454 EMID1Q96A84 441 aaPredicted RBP24.7■■□□□ 1.54
PNKP-212ENST00000599454 DSCC1Q9BVC3 393 aa24.7■■□□□ 1.54
PNKP-212ENST00000599454 COL20A1Q9P218 1284 aa24.7■■□□□ 1.54
PNKP-212ENST00000599454 MTCH2Q9Y6C9 303 aa24.7■■□□□ 1.54
PNKP-212ENST00000599454 B4E1Z4 1266 aa24.69■■□□□ 1.54
PNKP-212ENST00000599454 EIF3JO75822 258 aaKnown RBP24.69■■□□□ 1.54
PNKP-212ENST00000599454 KCNJ6P48051 423 aa24.69■■□□□ 1.54
PNKP-212ENST00000599454 CHMP4BP1P59074 171 aa24.69■■□□□ 1.54
PNKP-212ENST00000599454 RBL2Q08999 1139 aa24.69■■□□□ 1.54
PNKP-212ENST00000599454 DGKDQ16760 1214 aa24.69■■□□□ 1.54
PNKP-212ENST00000599454 IMMTQ16891 758 aaKnown RBP24.69■■□□□ 1.54
PNKP-212ENST00000599454 LY6KQ17RY6 165 aa24.69■■□□□ 1.54
PNKP-212ENST00000599454 ARHGEF16Q5VV41 709 aa24.69■■□□□ 1.54
PNKP-212ENST00000599454 CHD1LQ86WJ1 897 aa24.69■■□□□ 1.54
PNKP-212ENST00000599454 KATNAL1Q9BW62 490 aa24.69■■□□□ 1.54
PNKP-212ENST00000599454 KRT23Q9C075 422 aa24.69■■□□□ 1.54
PNKP-212ENST00000599454 CTNNA3Q9UI47 895 aa24.69■■□□□ 1.54
PNKP-212ENST00000599454 MUC3AQ02505 3323 aa24.68■■□□□ 1.54
PNKP-212ENST00000599454 DHX16O60231 1041 aaKnown RBP24.68■■□□□ 1.54
PNKP-212ENST00000599454 TAP1Q03518 808 aa24.68■■□□□ 1.54
PNKP-212ENST00000599454 GDF6Q6KF10 455 aaPredicted RBP24.68■■□□□ 1.54
PNKP-212ENST00000599454 B4GALNT3Q6L9W6 998 aa24.68■■□□□ 1.54
PNKP-212ENST00000599454 KAT2BQ92831 832 aa24.68■■□□□ 1.54
PNKP-212ENST00000599454 CNNM2Q9H8M5 875 aa24.68■■□□□ 1.54
PNKP-212ENST00000599454 JMJD4Q9H9V9 463 aa24.68■■□□□ 1.54
PNKP-212ENST00000599454 ZSWIM5Q9P217 1185 aa24.68■■□□□ 1.54
PNKP-212ENST00000599454 DDX41Q9UJV9 622 aaKnown RBP24.68■■□□□ 1.54
PNKP-212ENST00000599454 BRWD1Q9NSI6 2320 aa24.67■■□□□ 1.54
PNKP-212ENST00000599454 COL4A4P53420 1690 aaPredicted RBP24.67■■□□□ 1.54
PNKP-212ENST00000599454 SELPP16109 830 aa24.67■■□□□ 1.54
PNKP-212ENST00000599454 LRRC8DQ7L1W4 858 aa24.67■■□□□ 1.54
PNKP-212ENST00000599454 CHST3Q7LGC8 479 aa24.67■■□□□ 1.54
PNKP-212ENST00000599454 CTAGE1Q96RT6 745 aa24.67■■□□□ 1.54
PNKP-212ENST00000599454 UBAC1Q9BSL1 405 aa24.67■■□□□ 1.54
PNKP-212ENST00000599454 MAP3K20Q9NYL2 800 aaKnown RBP24.67■■□□□ 1.54
PNKP-212ENST00000599454 BAZ2BQ9UIF8 2168 aaKnown RBP24.67■■□□□ 1.54
PNKP-212ENST00000599454 NR3C2P08235 984 aa24.66■■□□□ 1.54
PNKP-212ENST00000599454 EIF2AK2P19525 551 aaKnown RBP24.66■■□□□ 1.54
PNKP-212ENST00000599454 GHRHRQ02643 423 aa24.66■■□□□ 1.54
PNKP-212ENST00000599454 NUCB1Q02818 461 aa24.66■■□□□ 1.54
PNKP-212ENST00000599454 LAMC2Q13753 1193 aa24.66■■□□□ 1.54
PNKP-212ENST00000599454 SKIV2LQ15477 1246 aaKnown RBP24.66■■□□□ 1.54
PNKP-212ENST00000599454 SAMD3Q8N6K7 520 aa24.66■■□□□ 1.54
PNKP-212ENST00000599454 AMNQ9BXJ7 453 aa24.66■■□□□ 1.54
PNKP-212ENST00000599454 CERS4Q9HA82 394 aa24.66■■□□□ 1.54
PNKP-212ENST00000599454 PXMP2Q9NR77 195 aa24.66■■□□□ 1.54
PNKP-212ENST00000599454 GTF2IRD1Q9UHL9 959 aa24.66■■□□□ 1.54
PNKP-212ENST00000599454 COG5Q9UP83 839 aa24.66■■□□□ 1.54
PNKP-212ENST00000599454 MRVI1Q9Y6F6 885 aa24.66■■□□□ 1.54
PNKP-212ENST00000599454 RFXAPO00287 272 aa24.65■■□□□ 1.54
PNKP-212ENST00000599454 TLL1O43897 1013 aa24.65■■□□□ 1.54
PNKP-212ENST00000599454 BMP1P13497 986 aa24.65■■□□□ 1.54
PNKP-212ENST00000599454 COL9A1P20849 921 aa24.65■■□□□ 1.54
PNKP-212ENST00000599454 CNKSR3Q6P9H4 555 aa24.65■■□□□ 1.54
PNKP-212ENST00000599454 C7orf31Q8N865 590 aa24.65■■□□□ 1.54
PNKP-212ENST00000599454 PPTC7Q8NI37 304 aa24.65■■□□□ 1.54
PNKP-212ENST00000599454 ARNTL2Q8WYA1 636 aa24.65■■□□□ 1.54
PNKP-212ENST00000599454 VAT1LQ9HCJ6 419 aa24.65■■□□□ 1.54
PNKP-212ENST00000599454 SIP14410 1827 aa24.64■■□□□ 1.54
PNKP-212ENST00000599454 EPOPA6NHQ4 379 aa24.64■■□□□ 1.54
PNKP-212ENST00000599454 F2P00734 622 aa24.64■■□□□ 1.54
PNKP-212ENST00000599454 CFBP00751 764 aa24.64■■□□□ 1.54
PNKP-212ENST00000599454 CXCL10P02778 98 aa24.64■■□□□ 1.54
PNKP-212ENST00000599454 PSEN2P49810 448 aa24.64■■□□□ 1.54
PNKP-212ENST00000599454 HSD17B4P51659 736 aa24.64■■□□□ 1.54
PNKP-212ENST00000599454 WDR5P61964 334 aaKnown RBP24.64■■□□□ 1.54
PNKP-212ENST00000599454 KCNV1Q6PIU1 500 aa24.64■■□□□ 1.54
PNKP-212ENST00000599454 DHX38Q92620 1227 aaKnown RBP24.64■■□□□ 1.54
PNKP-212ENST00000599454 HDAC6Q9UBN7 1215 aa24.64■■□□□ 1.54
PNKP-212ENST00000599454 MICAL3Q7RTP6 2002 aa24.63■■□□□ 1.53
PNKP-212ENST00000599454 EFCAB14O75071 495 aa24.63■■□□□ 1.53
PNKP-212ENST00000599454 CKBP12277 381 aa24.63■■□□□ 1.53
PNKP-212ENST00000599454 GPNMBQ14956 572 aa24.63■■□□□ 1.53
PNKP-212ENST00000599454 IFIT1BQ5T764 474 aaKnown RBP24.63■■□□□ 1.53
PNKP-212ENST00000599454 ABHD14A-ACY1A0A1B0GW23 586 aa24.62■■□□□ 1.53
PNKP-212ENST00000599454 HAS3O00219 553 aa24.62■■□□□ 1.53
PNKP-212ENST00000599454 HOXD8P13378 290 aaPredicted RBP24.62■■□□□ 1.53
PNKP-212ENST00000599454 TFF2Q03403 129 aa24.62■■□□□ 1.53
PNKP-212ENST00000599454 TRAF1Q13077 416 aa24.62■■□□□ 1.53
PNKP-212ENST00000599454 PTK7Q13308 1070 aa24.62■■□□□ 1.53
PNKP-212ENST00000599454 MFSD10Q14728 455 aa24.62■■□□□ 1.53
PNKP-212ENST00000599454 DHX37Q8IY37 1157 aaKnown RBP24.62■■□□□ 1.53
PNKP-212ENST00000599454 MTMR8Q96EF0 704 aa24.62■■□□□ 1.53
PNKP-212ENST00000599454 REV3LO60673 3130 aa24.61■■□□□ 1.53
PNKP-212ENST00000599454 PPFIA4O75335 1185 aa24.61■■□□□ 1.53
PNKP-212ENST00000599454 ARHGEF15O94989 841 aa24.61■■□□□ 1.53
PNKP-212ENST00000599454 KIAA0753Q2KHM9 967 aa24.61■■□□□ 1.53
PNKP-212ENST00000599454 STOX1Q6ZVD7 989 aa24.61■■□□□ 1.53
PNKP-212ENST00000599454 PDCD2LQ9BRP1 358 aa24.61■■□□□ 1.53
PNKP-212ENST00000599454 ALG1Q9BT22 464 aa24.61■■□□□ 1.53
PNKP-212ENST00000599454 ZBED2Q9BTP6 218 aa24.61■■□□□ 1.53
PNKP-212ENST00000599454 KAT6AQ92794 2004 aa24.61■■□□□ 1.53
PNKP-212ENST00000599454 KLRF2D3W0D1 207 aa24.6■■□□□ 1.53
PNKP-212ENST00000599454 OPLAHO14841 1288 aa24.6■■□□□ 1.53
PNKP-212ENST00000599454 ZBTB5O15062 677 aa24.6■■□□□ 1.53
PNKP-212ENST00000599454 NBNO60934 754 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms