RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 NCOR1O75376 2440 aa19.84■□□□□ 0.77
PNKP-210ENST00000597965 SCN5AQ14524 2016 aa19.83■□□□□ 0.77
PNKP-210ENST00000597965 MYH6P13533 1939 aa19.83■□□□□ 0.77
PNKP-210ENST00000597965 LAMC2Q13753 1193 aa19.83■□□□□ 0.77
PNKP-210ENST00000597965 SKIV2LQ15477 1246 aaKnown RBP19.83■□□□□ 0.77
PNKP-210ENST00000597965 KCNV1Q6PIU1 500 aa19.83■□□□□ 0.77
PNKP-210ENST00000597965 CHD1LQ86WJ1 897 aa19.83■□□□□ 0.77
PNKP-210ENST00000597965 HERC6Q8IVU3 1022 aa19.83■□□□□ 0.77
PNKP-210ENST00000597965 SAMD3Q8N6K7 520 aa19.83■□□□□ 0.77
PNKP-210ENST00000597965 C7orf31Q8N865 590 aa19.83■□□□□ 0.77
PNKP-210ENST00000597965 COG5Q9UP83 839 aa19.83■□□□□ 0.77
PNKP-210ENST00000597965 CHD7Q9P2D1 2997 aa19.83■□□□□ 0.76
PNKP-210ENST00000597965 KIAA1217Q5T5P2 1943 aa19.82■□□□□ 0.76
PNKP-210ENST00000597965 EFCAB14O75071 495 aa19.82■□□□□ 0.76
PNKP-210ENST00000597965 ARIH2O95376 493 aa19.82■□□□□ 0.76
PNKP-210ENST00000597965 SELPP16109 830 aa19.82■□□□□ 0.76
PNKP-210ENST00000597965 ARHGAP1Q07960 439 aa19.82■□□□□ 0.76
PNKP-210ENST00000597965 LY6KQ17RY6 165 aa19.82■□□□□ 0.76
PNKP-210ENST00000597965 QRICH1Q2TAL8 776 aa19.82■□□□□ 0.76
PNKP-210ENST00000597965 B4GALNT3Q6L9W6 998 aa19.82■□□□□ 0.76
PNKP-210ENST00000597965 TAAR1Q96RJ0 339 aa19.82■□□□□ 0.76
PNKP-210ENST00000597965 AMNQ9BXJ7 453 aa19.82■□□□□ 0.76
PNKP-210ENST00000597965 ZSWIM5Q9P217 1185 aa19.82■□□□□ 0.76
PNKP-210ENST00000597965 B4E1Z4 1266 aa19.81■□□□□ 0.76
PNKP-210ENST00000597965 TLL1O43897 1013 aa19.81■□□□□ 0.76
PNKP-210ENST00000597965 RBL2Q08999 1139 aa19.81■□□□□ 0.76
PNKP-210ENST00000597965 CHST3Q7LGC8 479 aa19.81■□□□□ 0.76
PNKP-210ENST00000597965 PLEKHM2Q8IWE5 1019 aa19.81■□□□□ 0.76
PNKP-210ENST00000597965 ENAHQ8N8S7 591 aaPredicted RBP19.81■□□□□ 0.76
PNKP-210ENST00000597965 PPTC7Q8NI37 304 aa19.81■□□□□ 0.76
PNKP-210ENST00000597965 MTCH2Q9Y6C9 303 aa19.81■□□□□ 0.76
PNKP-210ENST00000597965 MRVI1Q9Y6F6 885 aa19.81■□□□□ 0.76
PNKP-210ENST00000597965 CFBP00751 764 aa19.8■□□□□ 0.76
PNKP-210ENST00000597965 NUCB1Q02818 461 aa19.8■□□□□ 0.76
PNKP-210ENST00000597965 TAP1Q03518 808 aa19.8■□□□□ 0.76
PNKP-210ENST00000597965 IFIT1BQ5T764 474 aaKnown RBP19.8■□□□□ 0.76
PNKP-210ENST00000597965 CNKSR3Q6P9H4 555 aa19.8■□□□□ 0.76
PNKP-210ENST00000597965 LRRC8DQ7L1W4 858 aa19.8■□□□□ 0.76
PNKP-210ENST00000597965 ZBED2Q9BTP6 218 aa19.8■□□□□ 0.76
PNKP-210ENST00000597965 CPVLQ9H3G5 476 aa19.8■□□□□ 0.76
PNKP-210ENST00000597965 JMJD4Q9H9V9 463 aa19.8■□□□□ 0.76
PNKP-210ENST00000597965 GTF2IRD1Q9UHL9 959 aa19.8■□□□□ 0.76
PNKP-210ENST00000597965 DDX41Q9UJV9 622 aaKnown RBP19.8■□□□□ 0.76
PNKP-210ENST00000597965 TRIP12Q14669 1992 aaPredicted RBP19.8■□□□□ 0.76
PNKP-210ENST00000597965 ABHD14A-ACY1A0A1B0GW23 586 aa19.79■□□□□ 0.76
PNKP-210ENST00000597965 NR3C2P08235 984 aa19.79■□□□□ 0.76
PNKP-210ENST00000597965 EIF2AK2P19525 551 aaKnown RBP19.79■□□□□ 0.76
PNKP-210ENST00000597965 GDF6Q6KF10 455 aaPredicted RBP19.79■□□□□ 0.76
PNKP-210ENST00000597965 DHX37Q8IY37 1157 aaKnown RBP19.79■□□□□ 0.76
PNKP-210ENST00000597965 ARNTL2Q8WYA1 636 aa19.79■□□□□ 0.76
PNKP-210ENST00000597965 VAT1LQ9HCJ6 419 aa19.79■□□□□ 0.76
PNKP-210ENST00000597965 PXMP2Q9NR77 195 aa19.79■□□□□ 0.76
PNKP-210ENST00000597965 COL20A1Q9P218 1284 aa19.79■□□□□ 0.76
PNKP-210ENST00000597965 PPFIA4O75335 1185 aa19.78■□□□□ 0.76
PNKP-210ENST00000597965 TGFB3P10600 412 aa19.78■□□□□ 0.76
PNKP-210ENST00000597965 HSD17B4P51659 736 aa19.78■□□□□ 0.76
PNKP-210ENST00000597965 TRDNQ13061 729 aa19.78■□□□□ 0.76
PNKP-210ENST00000597965 PTK7Q13308 1070 aa19.78■□□□□ 0.76
PNKP-210ENST00000597965 TBC1D5Q92609 795 aa19.78■□□□□ 0.76
PNKP-210ENST00000597965 KAT2BQ92831 832 aa19.78■□□□□ 0.76
PNKP-210ENST00000597965 LMCD1Q9NZU5 365 aa19.78■□□□□ 0.76
PNKP-210ENST00000597965 PRRC2BQ5JSZ5 2229 aaKnown RBP19.78■□□□□ 0.76
PNKP-210ENST00000597965 F2P00734 622 aa19.77■□□□□ 0.76
PNKP-210ENST00000597965 CXCL10P02778 98 aa19.77■□□□□ 0.76
PNKP-210ENST00000597965 CKBP12277 381 aa19.77■□□□□ 0.76
PNKP-210ENST00000597965 BMP1P13497 986 aa19.77■□□□□ 0.76
PNKP-210ENST00000597965 COL9A1P20849 921 aa19.77■□□□□ 0.76
PNKP-210ENST00000597965 PSEN2P49810 448 aa19.77■□□□□ 0.76
PNKP-210ENST00000597965 WDR5P61964 334 aaKnown RBP19.77■□□□□ 0.76
PNKP-210ENST00000597965 GHRHRQ02643 423 aa19.77■□□□□ 0.76
PNKP-210ENST00000597965 IKBKEQ14164 716 aa19.77■□□□□ 0.76
PNKP-210ENST00000597965 MFSD10Q14728 455 aa19.77■□□□□ 0.76
PNKP-210ENST00000597965 C1QTNF1Q9BXJ1 281 aa19.77■□□□□ 0.76
PNKP-210ENST00000597965 CERS4Q9HA82 394 aa19.77■□□□□ 0.76
PNKP-210ENST00000597965 TRANK1O15050 2925 aa19.77■□□□□ 0.76
PNKP-210ENST00000597965 EMSYQ7Z589 1322 aa19.76■□□□□ 0.75
PNKP-210ENST00000597965 KLRF2D3W0D1 207 aa19.76■□□□□ 0.75
PNKP-210ENST00000597965 ZBTB5O15062 677 aa19.76■□□□□ 0.75
PNKP-210ENST00000597965 KIAA0753Q2KHM9 967 aa19.76■□□□□ 0.75
PNKP-210ENST00000597965 STOX1Q6ZVD7 989 aa19.76■□□□□ 0.75
PNKP-210ENST00000597965 PPP1R13LQ8WUF5 828 aa19.76■□□□□ 0.75
PNKP-210ENST00000597965 HLA-CQ95604 372 aa19.76■□□□□ 0.75
PNKP-210ENST00000597965 HDAC6Q9UBN7 1215 aa19.76■□□□□ 0.75
PNKP-210ENST00000597965 PCDHA1Q9Y5I3 950 aa19.76■□□□□ 0.75
PNKP-210ENST00000597965 TET1Q8NFU7 2136 aa19.76■□□□□ 0.75
PNKP-210ENST00000597965 XIRP2A4UGR9 3374 aa19.75■□□□□ 0.75
PNKP-210ENST00000597965 ERICH2A1L162 156 aa19.75■□□□□ 0.75
PNKP-210ENST00000597965 CTAGE1Q96RT6 745 aa19.75■□□□□ 0.75
PNKP-210ENST00000597965 RAD9AQ99638 391 aa19.75■□□□□ 0.75
PNKP-210ENST00000597965 PDCD2LQ9BRP1 358 aa19.75■□□□□ 0.75
PNKP-210ENST00000597965 ALG1Q9BT22 464 aa19.75■□□□□ 0.75
PNKP-210ENST00000597965 HAS3O00219 553 aa19.74■□□□□ 0.75
PNKP-210ENST00000597965 RFXAPO00287 272 aa19.74■□□□□ 0.75
PNKP-210ENST00000597965 MYCLP12524 364 aaPredicted RBP19.74■□□□□ 0.75
PNKP-210ENST00000597965 HOXD8P13378 290 aaPredicted RBP19.74■□□□□ 0.75
PNKP-210ENST00000597965 TFF2Q03403 129 aa19.74■□□□□ 0.75
PNKP-210ENST00000597965 CELF3Q5SZQ8 465 aaKnown RBP19.74■□□□□ 0.75
PNKP-210ENST00000597965 MYSM1Q5VVJ2 828 aa19.74■□□□□ 0.75
PNKP-210ENST00000597965 MTMR8Q96EF0 704 aa19.74■□□□□ 0.75
PNKP-210ENST00000597965 SPATA33Q96N06 139 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms