RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 ANP32AP39687 249 aaKnown RBP17.71■□□□□ 0.43
SMCO4-206ENST00000596676 ARHGAP4P98171 946 aa17.71■□□□□ 0.43
SMCO4-206ENST00000596676 ACVR2BQ13705 512 aa17.71■□□□□ 0.43
SMCO4-206ENST00000596676 PKP1Q13835 747 aa17.71■□□□□ 0.43
SMCO4-206ENST00000596676 PKN2Q16513 984 aaKnown RBP17.71■□□□□ 0.43
SMCO4-206ENST00000596676 ANO1Q5XXA6 986 aa17.71■□□□□ 0.43
SMCO4-206ENST00000596676 TAPT1Q6NXT6 567 aa17.71■□□□□ 0.43
SMCO4-206ENST00000596676 FAM177A1Q8N128 213 aaPredicted RBP17.71■□□□□ 0.43
SMCO4-206ENST00000596676 CRYGNQ8WXF5 182 aa17.71■□□□□ 0.43
SMCO4-206ENST00000596676 LENG1Q96BZ8 264 aaPredicted RBP17.71■□□□□ 0.43
SMCO4-206ENST00000596676 IWS1Q96ST2 819 aa17.71■□□□□ 0.43
SMCO4-206ENST00000596676 MTMR6Q9Y217 621 aa17.71■□□□□ 0.43
SMCO4-206ENST00000596676 KIF3AQ9Y496 699 aa17.71■□□□□ 0.43
SMCO4-206ENST00000596676 CYBAP13498 195 aa17.7■□□□□ 0.42
SMCO4-206ENST00000596676 NONOQ15233 471 aaKnown RBP eCLIP17.7■□□□□ 0.42
SMCO4-206ENST00000596676 STXBP2Q15833 593 aa17.7■□□□□ 0.42
SMCO4-206ENST00000596676 GJC2Q5T442 439 aaPredicted RBP17.7■□□□□ 0.42
SMCO4-206ENST00000596676 MAP3K21Q5TCX8 1036 aa17.7■□□□□ 0.42
SMCO4-206ENST00000596676 PCNX4Q63HM2 1172 aa17.7■□□□□ 0.42
SMCO4-206ENST00000596676 SEPT14Q6ZU15 432 aa17.7■□□□□ 0.42
SMCO4-206ENST00000596676 FERMT3Q86UX7 667 aa17.7■□□□□ 0.42
SMCO4-206ENST00000596676 TRMT44Q8IYL2 757 aaKnown RBP17.7■□□□□ 0.42
SMCO4-206ENST00000596676 UNC93B1Q9H1C4 597 aa17.7■□□□□ 0.42
SMCO4-206ENST00000596676 BCAS3Q9H6U6 928 aa17.7■□□□□ 0.42
SMCO4-206ENST00000596676 CENPFP49454 3210 aa17.7■□□□□ 0.42
SMCO4-206ENST00000596676 CCDC194A0A1B0GVG4 234 aa17.69■□□□□ 0.42
SMCO4-206ENST00000596676 SORBS3O60504 671 aa17.69■□□□□ 0.42
SMCO4-206ENST00000596676 ARIH2O95376 493 aa17.69■□□□□ 0.42
SMCO4-206ENST00000596676 ITGB5P18084 799 aa17.69■□□□□ 0.42
SMCO4-206ENST00000596676 ATP2B1P20020 1258 aa17.69■□□□□ 0.42
SMCO4-206ENST00000596676 CNGA1P29973 690 aa17.69■□□□□ 0.42
SMCO4-206ENST00000596676 ADCYAP1R1P41586 468 aa17.69■□□□□ 0.42
SMCO4-206ENST00000596676 IRX5P78411 483 aaPredicted RBP17.69■□□□□ 0.42
SMCO4-206ENST00000596676 SEMA3FQ13275 785 aa17.69■□□□□ 0.42
SMCO4-206ENST00000596676 SAFBQ15424 915 aaKnown RBP eCLIP17.69■□□□□ 0.42
SMCO4-206ENST00000596676 KRT25Q7Z3Z0 450 aa17.69■□□□□ 0.42
SMCO4-206ENST00000596676 MSL3Q8N5Y2 521 aaKnown RBP17.69■□□□□ 0.42
SMCO4-206ENST00000596676 WDR11Q9BZH6 1224 aa17.69■□□□□ 0.42
SMCO4-206ENST00000596676 BRMS1Q9HCU9 246 aa17.69■□□□□ 0.42
SMCO4-206ENST00000596676 FAM86B1E9PN63 330 aa17.68■□□□□ 0.42
SMCO4-206ENST00000596676 STX6O43752 255 aa17.68■□□□□ 0.42
SMCO4-206ENST00000596676 EIF3JO75822 258 aaKnown RBP17.68■□□□□ 0.42
SMCO4-206ENST00000596676 TDP2O95551 362 aa17.68■□□□□ 0.42
SMCO4-206ENST00000596676 FAM86B2P0C5J1 330 aa17.68■□□□□ 0.42
SMCO4-206ENST00000596676 U2AF2P26368 475 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMCO4-206ENST00000596676 NBR1Q14596 966 aa17.68■□□□□ 0.42
SMCO4-206ENST00000596676 CCDC144BQ3MJ40 725 aa17.68■□□□□ 0.42
SMCO4-206ENST00000596676 COPS5Q92905 334 aa17.68■□□□□ 0.42
SMCO4-206ENST00000596676 FOXP1Q9H334 677 aaPredicted RBP17.68■□□□□ 0.42
SMCO4-206ENST00000596676 ABHD16BQ9H3Z7 469 aa17.68■□□□□ 0.42
SMCO4-206ENST00000596676 EHMT1Q9H9B1 1298 aa17.68■□□□□ 0.42
SMCO4-206ENST00000596676 CNPY2Q9Y2B0 182 aa17.68■□□□□ 0.42
SMCO4-206ENST00000596676 UBIAD1Q9Y5Z9 338 aa17.68■□□□□ 0.42
SMCO4-206ENST00000596676 KIAA1217Q5T5P2 1943 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 CYP3A4P08684 503 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 ARP10275 920 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 CCL5P13501 91 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 GNL2Q13823 731 aaKnown RBP17.67■□□□□ 0.42
SMCO4-206ENST00000596676 LY6KQ17RY6 165 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 MCTP2Q6DN12 878 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 FAM173BQ6P4H8 233 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 NOSTRINQ8IVI9 506 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 GJA10Q969M2 543 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 ARMC5Q96C12 935 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 ZNF333Q96JL9 665 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 VTA1Q9NP79 307 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 PKD2L1Q9P0L9 805 aa17.67■□□□□ 0.42
SMCO4-206ENST00000596676 IGLV3-22A0A075B6J6 115 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 LOC102724159A0A0B4J2E5 919 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 POTEFA5A3E0 1075 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 B4DLN1 442 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 SMPD1P17405 629 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 PDCP20941 246 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 ZNF76P36508 570 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 SP2Q02086 613 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 RESTQ13127 1097 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 PWP2Q15269 919 aaKnown RBP17.66■□□□□ 0.42
SMCO4-206ENST00000596676 LETM2Q2VYF4 491 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 TEX2Q8IWB9 1127 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 INPP4AQ96PE3 977 aaPredicted RBP17.66■□□□□ 0.42
SMCO4-206ENST00000596676 MXRA8Q9BRK3 442 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 HMX1Q9NP08 348 aaPredicted RBP17.66■□□□□ 0.42
SMCO4-206ENST00000596676 ZDHHC9Q9Y397 364 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 TELO2Q9Y4R8 837 aa17.66■□□□□ 0.42
SMCO4-206ENST00000596676 RBM47A0AV96 593 aaKnown RBP17.65■□□□□ 0.42
SMCO4-206ENST00000596676 ATP9AO75110 1047 aa17.65■□□□□ 0.42
SMCO4-206ENST00000596676 TOB1P50616 345 aaPredicted RBP17.65■□□□□ 0.42
SMCO4-206ENST00000596676 PRR16Q569H4 304 aa17.65■□□□□ 0.42
SMCO4-206ENST00000596676 CCDC62Q6P9F0 684 aa17.65■□□□□ 0.42
SMCO4-206ENST00000596676 NEK8Q86SG6 692 aa17.65■□□□□ 0.42
SMCO4-206ENST00000596676 MPHOSPH6Q99547 160 aaKnown RBP17.65■□□□□ 0.42
SMCO4-206ENST00000596676 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.65■□□□□ 0.42
SMCO4-206ENST00000596676 JADE2Q9NQC1 790 aa17.65■□□□□ 0.42
SMCO4-206ENST00000596676 DOCK5Q9H7D0 1870 aa17.65■□□□□ 0.42
SMCO4-206ENST00000596676 SPATA31C2B4DYI2 1134 aa17.64■□□□□ 0.41
SMCO4-206ENST00000596676 MEIS1O00470 390 aa17.64■□□□□ 0.41
SMCO4-206ENST00000596676 SLC37A4O43826 429 aa17.64■□□□□ 0.41
SMCO4-206ENST00000596676 TXNP10599 105 aaKnown RBP17.64■□□□□ 0.41
SMCO4-206ENST00000596676 CIITAP33076 1130 aa17.64■□□□□ 0.41
SMCO4-206ENST00000596676 USP11P51784 963 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms