RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 PDE4DQ08499 809 aa18.54■□□□□ 0.56
USHBP1-205ENST00000595993 CCDC85BQ15834 202 aaPredicted RBP18.54■□□□□ 0.56
USHBP1-205ENST00000595993 TSGA10IPQ3SY00 556 aa18.54■□□□□ 0.56
USHBP1-205ENST00000595993 CCDC62Q6P9F0 684 aa18.54■□□□□ 0.56
USHBP1-205ENST00000595993 PHOSPHO2Q8TCD6 241 aa18.54■□□□□ 0.56
USHBP1-205ENST00000595993 IGDCC4Q8TDY8 1250 aa18.54■□□□□ 0.56
USHBP1-205ENST00000595993 PTPRSQ13332 1948 aa18.53■□□□□ 0.56
USHBP1-205ENST00000595993 ZBBXA8MT70 800 aa18.53■□□□□ 0.56
USHBP1-205ENST00000595993 ARIH2O95376 493 aa18.53■□□□□ 0.56
USHBP1-205ENST00000595993 IQCF3P0C7M6 154 aa18.53■□□□□ 0.56
USHBP1-205ENST00000595993 BRDTQ58F21 947 aaPredicted RBP18.53■□□□□ 0.56
USHBP1-205ENST00000595993 TMEM67Q5HYA8 995 aa18.53■□□□□ 0.56
USHBP1-205ENST00000595993 GPATCH4Q5T3I0 446 aaKnown RBP18.53■□□□□ 0.56
USHBP1-205ENST00000595993 COPS5Q92905 334 aa18.53■□□□□ 0.56
USHBP1-205ENST00000595993 SLC9A7Q96T83 725 aa18.53■□□□□ 0.56
USHBP1-205ENST00000595993 MPHOSPH6Q99547 160 aaKnown RBP18.53■□□□□ 0.56
USHBP1-205ENST00000595993 CPVLQ9H3G5 476 aa18.53■□□□□ 0.56
USHBP1-205ENST00000595993 LY9Q9HBG7 655 aa18.53■□□□□ 0.56
USHBP1-205ENST00000595993 CA3P07451 260 aa18.52■□□□□ 0.56
USHBP1-205ENST00000595993 MCM5P33992 734 aa18.52■□□□□ 0.56
USHBP1-205ENST00000595993 WTAPQ15007 396 aa18.52■□□□□ 0.56
USHBP1-205ENST00000595993 DEFB128Q7Z7B8 93 aa18.52■□□□□ 0.56
USHBP1-205ENST00000595993 SESTD1Q86VW0 696 aa18.52■□□□□ 0.56
USHBP1-205ENST00000595993 CTAGE1Q96RT6 745 aa18.52■□□□□ 0.56
USHBP1-205ENST00000595993 UHRF1Q96T88 793 aaPredicted RBP18.52■□□□□ 0.56
USHBP1-205ENST00000595993 LRRC2Q9BYS8 371 aa18.52■□□□□ 0.56
USHBP1-205ENST00000595993 SNX14Q9Y5W7 946 aa18.52■□□□□ 0.56
USHBP1-205ENST00000595993 KIAA1217Q5T5P2 1943 aa18.52■□□□□ 0.56
USHBP1-205ENST00000595993 ERICH2A1L162 156 aa18.51■□□□□ 0.55
USHBP1-205ENST00000595993 B4DLN1 442 aa18.51■□□□□ 0.55
USHBP1-205ENST00000595993 SH2B2O14492 632 aaPredicted RBP18.51■□□□□ 0.55
USHBP1-205ENST00000595993 TXNP10599 105 aaKnown RBP18.51■□□□□ 0.55
USHBP1-205ENST00000595993 ACTN1P12814 892 aa18.51■□□□□ 0.55
USHBP1-205ENST00000595993 BMP1P13497 986 aa18.51■□□□□ 0.55
USHBP1-205ENST00000595993 MRPL12P52815 198 aaKnown RBP18.51■□□□□ 0.55
USHBP1-205ENST00000595993 SART3Q15020 963 aaKnown RBP18.51■□□□□ 0.55
USHBP1-205ENST00000595993 TET1Q8NFU7 2136 aa18.51■□□□□ 0.55
USHBP1-205ENST00000595993 TCEANC2Q96MN5 208 aa18.51■□□□□ 0.55
USHBP1-205ENST00000595993 NEK1Q96PY6 1258 aa18.51■□□□□ 0.55
USHBP1-205ENST00000595993 USP26Q9BXU7 913 aa18.51■□□□□ 0.55
USHBP1-205ENST00000595993 UBA5Q9GZZ9 404 aa18.51■□□□□ 0.55
USHBP1-205ENST00000595993 MTCH2Q9Y6C9 303 aa18.51■□□□□ 0.55
USHBP1-205ENST00000595993 COL9A1P20849 921 aa18.5■□□□□ 0.55
USHBP1-205ENST00000595993 RBL2Q08999 1139 aa18.5■□□□□ 0.55
USHBP1-205ENST00000595993 GPNMBQ14956 572 aa18.5■□□□□ 0.55
USHBP1-205ENST00000595993 FAM47CQ5HY64 1035 aa18.5■□□□□ 0.55
USHBP1-205ENST00000595993 TSPYL2Q9H2G4 693 aaPredicted RBP18.5■□□□□ 0.55
USHBP1-205ENST00000595993 MYH6P13533 1939 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 PRRC2BQ5JSZ5 2229 aaKnown RBP18.49■□□□□ 0.55
USHBP1-205ENST00000595993 EPOPA6NHQ4 379 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 EPB41L2O43491 1005 aaKnown RBP18.49■□□□□ 0.55
USHBP1-205ENST00000595993 BAIAP3O94812 1187 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 ARHGEF15O94989 841 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 CPA1P15085 419 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 EXOSC10Q01780 885 aaKnown RBP18.49■□□□□ 0.55
USHBP1-205ENST00000595993 TAP1Q03518 808 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 ARHGAP1Q07960 439 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 BFSP2Q13515 415 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 KRT32Q14532 448 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 ASPRV1Q53RT3 343 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 HERC6Q8IVU3 1022 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 STAG2Q8N3U4 1231 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 PPP1R13LQ8WUF5 828 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 TMEM87BQ96K49 555 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 MTA3Q9BTC8 594 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 ABCB11O95342 1321 aa18.49■□□□□ 0.55
USHBP1-205ENST00000595993 COL4A4P53420 1690 aaPredicted RBP18.48■□□□□ 0.55
USHBP1-205ENST00000595993 MMP3P08254 477 aa18.48■□□□□ 0.55
USHBP1-205ENST00000595993 PARP1P09874 1014 aaKnown RBP18.48■□□□□ 0.55
USHBP1-205ENST00000595993 TROAPQ12815 778 aa18.48■□□□□ 0.55
USHBP1-205ENST00000595993 GRM4Q14833 912 aa18.48■□□□□ 0.55
USHBP1-205ENST00000595993 SLC35G1Q2M3R5 365 aa18.48■□□□□ 0.55
USHBP1-205ENST00000595993 USH1GQ495M9 461 aa18.48■□□□□ 0.55
USHBP1-205ENST00000595993 RETREG2Q8NC44 543 aa18.48■□□□□ 0.55
USHBP1-205ENST00000595993 CAGE1Q8TC20 777 aa18.48■□□□□ 0.55
USHBP1-205ENST00000595993 SYTL5Q8TDW5 730 aaPredicted RBP18.48■□□□□ 0.55
USHBP1-205ENST00000595993 TBC1D5Q92609 795 aa18.48■□□□□ 0.55
USHBP1-205ENST00000595993 KAT2BQ92831 832 aa18.48■□□□□ 0.55
USHBP1-205ENST00000595993 JAKMIP1Q96N16 626 aaKnown RBP18.48■□□□□ 0.55
USHBP1-205ENST00000595993 MYL10Q9BUA6 226 aa18.48■□□□□ 0.55
USHBP1-205ENST00000595993 COL20A1Q9P218 1284 aa18.48■□□□□ 0.55
USHBP1-205ENST00000595993 MAD2L2Q9UI95 211 aa18.48■□□□□ 0.55
USHBP1-205ENST00000595993 PALM3A6NDB9 673 aaPredicted RBP18.47■□□□□ 0.55
USHBP1-205ENST00000595993 RFXAPO00287 272 aa18.47■□□□□ 0.55
USHBP1-205ENST00000595993 SEC24BO95487 1268 aa18.47■□□□□ 0.55
USHBP1-205ENST00000595993 GHRHRQ02643 423 aa18.47■□□□□ 0.55
USHBP1-205ENST00000595993 TFF2Q03403 129 aa18.47■□□□□ 0.55
USHBP1-205ENST00000595993 CDC37Q16543 378 aaPredicted RBP18.47■□□□□ 0.55
USHBP1-205ENST00000595993 DHX32Q7L7V1 743 aaKnown RBP18.47■□□□□ 0.55
USHBP1-205ENST00000595993 ZNF654Q8IZM8 581 aa18.47■□□□□ 0.55
USHBP1-205ENST00000595993 AFAP1L1Q8TED9 768 aa18.47■□□□□ 0.55
USHBP1-205ENST00000595993 AFG1LQ8WV93 481 aa18.47■□□□□ 0.55
USHBP1-205ENST00000595993 EMID1Q96A84 441 aaPredicted RBP18.47■□□□□ 0.55
USHBP1-205ENST00000595993 IWS1Q96ST2 819 aa18.47■□□□□ 0.55
USHBP1-205ENST00000595993 TRIP12Q14669 1992 aaPredicted RBP18.47■□□□□ 0.55
USHBP1-205ENST00000595993 GH1P01241 217 aa18.46■□□□□ 0.55
USHBP1-205ENST00000595993 LIFRP42702 1097 aa18.46■□□□□ 0.55
USHBP1-205ENST00000595993 PTGISQ16647 500 aa18.46■□□□□ 0.55
USHBP1-205ENST00000595993 AAK1Q2M2I8 961 aa18.46■□□□□ 0.55
USHBP1-205ENST00000595993 GDF6Q6KF10 455 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms