RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 CXXC1Q9P0U4 656 aaPredicted RBP20.78■□□□□ 0.92
HOMER3-208ENST00000595756 PCDHA1Q9Y5I3 950 aa20.78■□□□□ 0.92
HOMER3-208ENST00000595756 TAF6LQ9Y6J9 622 aa20.78■□□□□ 0.92
HOMER3-208ENST00000595756 PITPNM1O00562 1244 aa20.77■□□□□ 0.92
HOMER3-208ENST00000595756 CYP2C9P11712 490 aa20.77■□□□□ 0.92
HOMER3-208ENST00000595756 TROAPQ12815 778 aa20.77■□□□□ 0.92
HOMER3-208ENST00000595756 GRIN2CQ14957 1233 aa20.77■□□□□ 0.92
HOMER3-208ENST00000595756 LY6KQ17RY6 165 aa20.77■□□□□ 0.92
HOMER3-208ENST00000595756 AFG1LQ8WV93 481 aa20.77■□□□□ 0.92
HOMER3-208ENST00000595756 SCLYQ96I15 445 aa20.77■□□□□ 0.92
HOMER3-208ENST00000595756 BAZ2BQ9UIF8 2168 aaKnown RBP20.77■□□□□ 0.92
HOMER3-208ENST00000595756 MYH7BA7E2Y1 1941 aa20.76■□□□□ 0.91
HOMER3-208ENST00000595756 GRXCR1A8MXD5 290 aa20.76■□□□□ 0.91
HOMER3-208ENST00000595756 NR3C2P08235 984 aa20.76■□□□□ 0.91
HOMER3-208ENST00000595756 RFC2P35250 354 aa20.76■□□□□ 0.91
HOMER3-208ENST00000595756 PBX2P40425 430 aa20.76■□□□□ 0.91
HOMER3-208ENST00000595756 SLC35G1Q2M3R5 365 aa20.76■□□□□ 0.91
HOMER3-208ENST00000595756 OTOP2Q7RTS6 562 aa20.76■□□□□ 0.91
HOMER3-208ENST00000595756 SESTD1Q86VW0 696 aa20.76■□□□□ 0.91
HOMER3-208ENST00000595756 HOMER1Q86YM7 354 aa20.76■□□□□ 0.91
HOMER3-208ENST00000595756 MB21D2Q8IYB1 491 aaPredicted RBP20.76■□□□□ 0.91
HOMER3-208ENST00000595756 VWCEQ96DN2 955 aa20.76■□□□□ 0.91
HOMER3-208ENST00000595756 PDCD2LQ9BRP1 358 aa20.76■□□□□ 0.91
HOMER3-208ENST00000595756 SENP2Q9HC62 589 aa20.76■□□□□ 0.91
HOMER3-208ENST00000595756 DDX41Q9UJV9 622 aaKnown RBP20.76■□□□□ 0.91
HOMER3-208ENST00000595756 TRANK1O15050 2925 aa20.75■□□□□ 0.91
HOMER3-208ENST00000595756 ANTXR2P58335 489 aa20.75■□□□□ 0.91
HOMER3-208ENST00000595756 TMEM67Q5HYA8 995 aa20.75■□□□□ 0.91
HOMER3-208ENST00000595756 CATIPQ7Z7H3 387 aa20.75■□□□□ 0.91
HOMER3-208ENST00000595756 PIGSQ96S52 555 aa20.75■□□□□ 0.91
HOMER3-208ENST00000595756 ESYT1Q9BSJ8 1104 aa20.75■□□□□ 0.91
HOMER3-208ENST00000595756 MSRAQ9UJ68 235 aa20.75■□□□□ 0.91
HOMER3-208ENST00000595756 RBM8AQ9Y5S9 174 aaKnown RBP20.75■□□□□ 0.91
HOMER3-208ENST00000595756 MRVI1Q9Y6F6 885 aa20.75■□□□□ 0.91
HOMER3-208ENST00000595756 CYTH3O43739 400 aa20.74■□□□□ 0.91
HOMER3-208ENST00000595756 DGKDQ16760 1214 aa20.74■□□□□ 0.91
HOMER3-208ENST00000595756 PPTC7Q8NI37 304 aa20.74■□□□□ 0.91
HOMER3-208ENST00000595756 MAP3K14Q99558 947 aa20.74■□□□□ 0.91
HOMER3-208ENST00000595756 MTA3Q9BTC8 594 aa20.74■□□□□ 0.91
HOMER3-208ENST00000595756 PNMA6FA0A0J9YX94 578 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 CASTP20810 708 aaKnown RBP20.73■□□□□ 0.91
HOMER3-208ENST00000595756 BFSP2Q13515 415 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 LAMC2Q13753 1193 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 PGM5Q15124 567 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 KCNV1Q6PIU1 500 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 CHST3Q7LGC8 479 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 CCDC155Q8N6L0 562 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 IGDCC4Q8TDY8 1250 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 KAT2BQ92831 832 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 KATNAL1Q9BW62 490 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 NOD1Q9Y239 953 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 SLC4A7Q9Y6M7 1214 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 FRMPD4Q14CM0 1322 aa20.73■□□□□ 0.91
HOMER3-208ENST00000595756 TRIP12Q14669 1992 aaPredicted RBP20.72■□□□□ 0.91
HOMER3-208ENST00000595756 GCOM1H8Y6P7 765 aaPredicted RBP20.72■□□□□ 0.91
HOMER3-208ENST00000595756 RGS20O76081 388 aa20.72■□□□□ 0.91
HOMER3-208ENST00000595756 DDAH1O94760 285 aa20.72■□□□□ 0.91
HOMER3-208ENST00000595756 F2P00734 622 aa20.72■□□□□ 0.91
HOMER3-208ENST00000595756 POLR2MP0CAP2 368 aa20.72■□□□□ 0.91
HOMER3-208ENST00000595756 HOXD8P13378 290 aaPredicted RBP20.72■□□□□ 0.91
HOMER3-208ENST00000595756 HOXA13P31271 388 aaPredicted RBP20.72■□□□□ 0.91
HOMER3-208ENST00000595756 CAGE1Q8TC20 777 aa20.72■□□□□ 0.91
HOMER3-208ENST00000595756 PPP1R13LQ8WUF5 828 aa20.72■□□□□ 0.91
HOMER3-208ENST00000595756 LY9Q9HBG7 655 aa20.72■□□□□ 0.91
HOMER3-208ENST00000595756 ZBBXA8MT70 800 aa20.71■□□□□ 0.91
HOMER3-208ENST00000595756 IQCF3P0C7M6 154 aa20.71■□□□□ 0.91
HOMER3-208ENST00000595756 ACTN1P12814 892 aa20.71■□□□□ 0.91
HOMER3-208ENST00000595756 PTGISQ16647 500 aa20.71■□□□□ 0.91
HOMER3-208ENST00000595756 VSIG10LQ86VR7 867 aa20.71■□□□□ 0.91
HOMER3-208ENST00000595756 RETREG2Q8NC44 543 aa20.71■□□□□ 0.91
HOMER3-208ENST00000595756 IL31RAQ8NI17 732 aa20.71■□□□□ 0.91
HOMER3-208ENST00000595756 GAS2L1Q99501 681 aaPredicted RBP20.71■□□□□ 0.91
HOMER3-208ENST00000595756 SPZ1Q9BXG8 430 aa20.71■□□□□ 0.91
HOMER3-208ENST00000595756 GTF2IRD1Q9UHL9 959 aa20.71■□□□□ 0.91
HOMER3-208ENST00000595756 YBX2Q9Y2T7 364 aaKnown RBP20.71■□□□□ 0.91
HOMER3-208ENST00000595756 EIF5BO60841 1220 aaKnown RBP20.7■□□□□ 0.9
HOMER3-208ENST00000595756 MYCLP12524 364 aaPredicted RBP20.7■□□□□ 0.9
HOMER3-208ENST00000595756 CCND2P30279 289 aa20.7■□□□□ 0.9
HOMER3-208ENST00000595756 KIF5BP33176 963 aa20.7■□□□□ 0.9
HOMER3-208ENST00000595756 RBL2Q08999 1139 aa20.7■□□□□ 0.9
HOMER3-208ENST00000595756 GDF6Q6KF10 455 aaPredicted RBP20.7■□□□□ 0.9
HOMER3-208ENST00000595756 DEFB128Q7Z7B8 93 aa20.7■□□□□ 0.9
HOMER3-208ENST00000595756 DHX37Q8IY37 1157 aaKnown RBP20.7■□□□□ 0.9
HOMER3-208ENST00000595756 ZNF654Q8IZM8 581 aa20.7■□□□□ 0.9
HOMER3-208ENST00000595756 TET1Q8NFU7 2136 aa20.7■□□□□ 0.9
HOMER3-208ENST00000595756 CTCFLQ8NI51 663 aaPredicted RBP20.7■□□□□ 0.9
HOMER3-208ENST00000595756 AFAP1L1Q8TED9 768 aa20.7■□□□□ 0.9
HOMER3-208ENST00000595756 CTAGE1Q96RT6 745 aa20.7■□□□□ 0.9
HOMER3-208ENST00000595756 LSG1Q9H089 658 aaKnown RBP20.7■□□□□ 0.9
HOMER3-208ENST00000595756 NKX2-4Q9H2Z4 354 aa20.7■□□□□ 0.9
HOMER3-208ENST00000595756 PCDHA11Q9Y5I1 949 aa20.7■□□□□ 0.9
HOMER3-208ENST00000595756 GTF3C3Q9Y5Q9 886 aa20.7■□□□□ 0.9
HOMER3-208ENST00000595756 PTPRSQ13332 1948 aa20.7■□□□□ 0.9
HOMER3-208ENST00000595756 REV3LO60673 3130 aa20.69■□□□□ 0.9
HOMER3-208ENST00000595756 MUC3AQ02505 3323 aa20.69■□□□□ 0.9
HOMER3-208ENST00000595756 TGFB3P10600 412 aa20.69■□□□□ 0.9
HOMER3-208ENST00000595756 ATP2A2P16615 1042 aaKnown RBP20.69■□□□□ 0.9
HOMER3-208ENST00000595756 UBA1P22314 1058 aaKnown RBP20.69■□□□□ 0.9
HOMER3-208ENST00000595756 PSEN2P49810 448 aa20.69■□□□□ 0.9
HOMER3-208ENST00000595756 CHMP4BP1P59074 171 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms