RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 PSRC1Q6PGN9 363 aaPredicted RBP27.17■■□□□ 1.94
LSM4-204ENST00000594828 ZNF365Q70YC5 407 aa27.17■■□□□ 1.94
LSM4-204ENST00000594828 FCHSD1Q86WN1 690 aa27.17■■□□□ 1.94
LSM4-204ENST00000594828 LZTS2Q9BRK4 669 aa27.17■■□□□ 1.94
LSM4-204ENST00000594828 SPZ1Q9BXG8 430 aa27.17■■□□□ 1.94
LSM4-204ENST00000594828 MMP3P08254 477 aa27.16■■□□□ 1.94
LSM4-204ENST00000594828 GNAQP50148 359 aa27.16■■□□□ 1.94
LSM4-204ENST00000594828 COL9A3Q14050 684 aaPredicted RBP27.16■■□□□ 1.94
LSM4-204ENST00000594828 PGM5Q15124 567 aa27.16■■□□□ 1.94
LSM4-204ENST00000594828 VSIG10LQ86VR7 867 aa27.16■■□□□ 1.94
LSM4-204ENST00000594828 RRP36Q96EU6 259 aaKnown RBP27.16■■□□□ 1.94
LSM4-204ENST00000594828 GUCD1Q96NT3 240 aa27.16■■□□□ 1.94
LSM4-204ENST00000594828 SEMA6BQ9H3T3 888 aa27.16■■□□□ 1.94
LSM4-204ENST00000594828 BAZ2BQ9UIF8 2168 aaKnown RBP27.16■■□□□ 1.94
LSM4-204ENST00000594828 CYP2C9P11712 490 aa27.15■■□□□ 1.94
LSM4-204ENST00000594828 CASTP20810 708 aaKnown RBP27.15■■□□□ 1.94
LSM4-204ENST00000594828 PTPN11Q06124 597 aaPredicted RBP27.15■■□□□ 1.94
LSM4-204ENST00000594828 PPP1R13LQ8WUF5 828 aa27.15■■□□□ 1.94
LSM4-204ENST00000594828 KIAA1217Q5T5P2 1943 aa27.15■■□□□ 1.94
LSM4-204ENST00000594828 CDC45O75419 566 aa27.14■■□□□ 1.94
LSM4-204ENST00000594828 CALM1P0DP23 149 aa27.14■■□□□ 1.94
LSM4-204ENST00000594828 CALM2P0DP24 149 aa27.14■■□□□ 1.94
LSM4-204ENST00000594828 CALM3P0DP25 149 aa27.14■■□□□ 1.94
LSM4-204ENST00000594828 CHMP4BP1P59074 171 aa27.14■■□□□ 1.94
LSM4-204ENST00000594828 LAMC2Q13753 1193 aa27.14■■□□□ 1.94
LSM4-204ENST00000594828 KCNV1Q6PIU1 500 aa27.14■■□□□ 1.94
LSM4-204ENST00000594828 EMID1Q96A84 441 aaPredicted RBP27.14■■□□□ 1.94
LSM4-204ENST00000594828 LRRC2Q9BYS8 371 aa27.14■■□□□ 1.94
LSM4-204ENST00000594828 WNT8AQ9H1J5 351 aa27.14■■□□□ 1.94
LSM4-204ENST00000594828 SEC63Q9UGP8 760 aaKnown RBP27.14■■□□□ 1.94
LSM4-204ENST00000594828 SLC12A7Q9Y666 1083 aa27.14■■□□□ 1.94
LSM4-204ENST00000594828 RGS20O76081 388 aa27.13■■□□□ 1.93
LSM4-204ENST00000594828 FGBP02675 491 aa27.13■■□□□ 1.93
LSM4-204ENST00000594828 CCND2P30279 289 aa27.13■■□□□ 1.93
LSM4-204ENST00000594828 DGKDQ16760 1214 aa27.13■■□□□ 1.93
LSM4-204ENST00000594828 RASIP1Q5U651 963 aa27.13■■□□□ 1.93
LSM4-204ENST00000594828 DHX37Q8IY37 1157 aaKnown RBP27.13■■□□□ 1.93
LSM4-204ENST00000594828 IL31RAQ8NI17 732 aa27.13■■□□□ 1.93
LSM4-204ENST00000594828 CCDC136Q96JN2 1154 aa27.13■■□□□ 1.93
LSM4-204ENST00000594828 SCN10AQ9Y5Y9 1956 aa27.13■■□□□ 1.93
LSM4-204ENST00000594828 PLEKHA8P1O95397 391 aa27.12■■□□□ 1.93
LSM4-204ENST00000594828 RXRAP19793 462 aa27.12■■□□□ 1.93
LSM4-204ENST00000594828 RPUSD2Q8IZ73 545 aaKnown RBP27.12■■□□□ 1.93
LSM4-204ENST00000594828 SRBD1Q8N5C6 995 aaKnown RBP27.12■■□□□ 1.93
LSM4-204ENST00000594828 SLC17A8Q8NDX2 589 aa27.12■■□□□ 1.93
LSM4-204ENST00000594828 NEK1Q96PY6 1258 aa27.12■■□□□ 1.93
LSM4-204ENST00000594828 TTYH1Q9H313 450 aaPredicted RBP27.12■■□□□ 1.93
LSM4-204ENST00000594828 LAMA2P24043 3122 aaKnown RBP27.12■■□□□ 1.93
LSM4-204ENST00000594828 CMTR1Q8N1G2 835 aaKnown RBP27.11■■□□□ 1.93
LSM4-204ENST00000594828 HERVK_113Q902F9 699 aa27.11■■□□□ 1.93
LSM4-204ENST00000594828 SCLYQ96I15 445 aa27.11■■□□□ 1.93
LSM4-204ENST00000594828 ZFP91Q96JP5 570 aaPredicted RBP27.11■■□□□ 1.93
LSM4-204ENST00000594828 TMEM265A0A087WTH1 108 aa27.1■■□□□ 1.93
LSM4-204ENST00000594828 TGFB3P10600 412 aa27.1■■□□□ 1.93
LSM4-204ENST00000594828 RAB11FIP4Q86YS3 637 aa27.1■■□□□ 1.93
LSM4-204ENST00000594828 FANCBQ8NB91 859 aa27.1■■□□□ 1.93
LSM4-204ENST00000594828 PPTC7Q8NI37 304 aa27.1■■□□□ 1.93
LSM4-204ENST00000594828 KAT2BQ92831 832 aa27.1■■□□□ 1.93
LSM4-204ENST00000594828 CUL5Q93034 780 aa27.1■■□□□ 1.93
LSM4-204ENST00000594828 CDX2Q99626 313 aaPredicted RBP27.1■■□□□ 1.93
LSM4-204ENST00000594828 MTIF3Q9H2K0 278 aaKnown RBP27.1■■□□□ 1.93
LSM4-204ENST00000594828 NOD1Q9Y239 953 aa27.1■■□□□ 1.93
LSM4-204ENST00000594828 DNAJB2P25686 324 aa27.09■■□□□ 1.93
LSM4-204ENST00000594828 CELF3Q5SZQ8 465 aaKnown RBP27.09■■□□□ 1.93
LSM4-204ENST00000594828 MYSM1Q5VVJ2 828 aa27.09■■□□□ 1.93
LSM4-204ENST00000594828 SYNE3Q6ZMZ3 975 aa27.09■■□□□ 1.93
LSM4-204ENST00000594828 OTOP2Q7RTS6 562 aa27.09■■□□□ 1.93
LSM4-204ENST00000594828 SGMS1Q86VZ5 419 aa27.09■■□□□ 1.93
LSM4-204ENST00000594828 SMARCC2Q8TAQ2 1214 aa27.09■■□□□ 1.93
LSM4-204ENST00000594828 TSGA10IPQ3SY00 556 aa27.08■■□□□ 1.93
LSM4-204ENST00000594828 RETREG2Q8NC44 543 aa27.08■■□□□ 1.93
LSM4-204ENST00000594828 CXXC1Q9P0U4 656 aaPredicted RBP27.08■■□□□ 1.93
LSM4-204ENST00000594828 GRXCR1A8MXD5 290 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 SORBS3O60504 671 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 PPFIA4O75335 1185 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 GGPS1O95749 300 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 SP2Q02086 613 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 PTGISQ16647 500 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 USP17L6PQ6QN14 398 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 DHX32Q7L7V1 743 aaKnown RBP27.07■■□□□ 1.92
LSM4-204ENST00000594828 SESTD1Q86VW0 696 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 MICU3Q86XE3 530 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 RASEFQ8IZ41 740 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 CCDC82Q8N4S0 544 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 SPATA33Q96N06 139 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 KATNAL1Q9BW62 490 aa27.07■■□□□ 1.92
LSM4-204ENST00000594828 PIK3CDO00329 1044 aa27.06■■□□□ 1.92
LSM4-204ENST00000594828 PITPNM1O00562 1244 aa27.06■■□□□ 1.92
LSM4-204ENST00000594828 STAM2O75886 525 aa27.06■■□□□ 1.92
LSM4-204ENST00000594828 PSEN2P49810 448 aa27.06■■□□□ 1.92
LSM4-204ENST00000594828 MRPS9P82933 396 aaKnown RBP27.06■■□□□ 1.92
LSM4-204ENST00000594828 EXOSC10Q01780 885 aaKnown RBP27.06■■□□□ 1.92
LSM4-204ENST00000594828 BFSP2Q13515 415 aa27.06■■□□□ 1.92
LSM4-204ENST00000594828 GNPTABQ3T906 1256 aa27.06■■□□□ 1.92
LSM4-204ENST00000594828 GPKOWQ92917 476 aaPredicted RBP eCLIP27.06■■□□□ 1.92
LSM4-204ENST00000594828 TIFAQ96CG3 184 aa27.06■■□□□ 1.92
LSM4-204ENST00000594828 MLXIPQ9HAP2 919 aa27.06■■□□□ 1.92
LSM4-204ENST00000594828 FRMPD4Q14CM0 1322 aa27.06■■□□□ 1.92
LSM4-204ENST00000594828 MEIS2O14770 477 aa27.05■■□□□ 1.92
LSM4-204ENST00000594828 PFKMP08237 780 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms