RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 AKR1A1P14550 325 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 XBP1P17861 261 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 CCND2P30279 289 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 GJA8P48165 433 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 FOSBP53539 338 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 HMGN5P82970 282 aaKnown RBP11.38□□□□□ -0.59
TPM4-216ENST00000592822 PCNX4Q63HM2 1172 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 IQSEC1Q6DN90 963 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 BLIDQ8IZY5 108 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 BICD2Q8TD16 824 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 U2AF1L4Q8WU68 220 aaKnown RBP11.38□□□□□ -0.59
TPM4-216ENST00000592822 ANO3Q9BYT9 981 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 FAM184BQ9ULE4 1060 aa11.38□□□□□ -0.59
TPM4-216ENST00000592822 MSCO60682 206 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 SMPD1P17405 629 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 EN2P19622 333 aaPredicted RBP11.37□□□□□ -0.59
TPM4-216ENST00000592822 PTGS1P23219 599 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 SREBF1P36956 1147 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 SOX10P56693 466 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 TNFAIP2Q03169 654 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 KRT40Q6A162 431 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 MCTP2Q6DN12 878 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 XRRA1Q6P2D8 792 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 CCDC62Q6P9F0 684 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 SEPT14Q6ZU15 432 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 FAM184AQ8NB25 1140 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 OXER1Q8TDS5 423 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 SCFD2Q8WU76 684 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 CRYGNQ8WXF5 182 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 WDR11Q9BZH6 1224 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 OGDHLQ9ULD0 1010 aa11.37□□□□□ -0.59
TPM4-216ENST00000592822 EDIL3O43854 480 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 DUSP11O75319 330 aaKnown RBP11.36□□□□□ -0.59
TPM4-216ENST00000592822 STAM2O75886 525 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 ARIH2O95376 493 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 TFRCP02786 760 aaKnown RBP11.36□□□□□ -0.59
TPM4-216ENST00000592822 MMP1P03956 469 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 RARBP10826 455 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 GJB2P29033 226 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 ARHGAP4P98171 946 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 GUCY1B3Q02153 619 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 TRIM29Q14134 588 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 GJC2Q5T442 439 aaPredicted RBP11.36□□□□□ -0.59
TPM4-216ENST00000592822 C8orf76Q96K31 380 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 INPP4AQ96PE3 977 aaPredicted RBP11.36□□□□□ -0.59
TPM4-216ENST00000592822 EHMT1Q9H9B1 1298 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 RTEL1Q9NZ71 1219 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 SMC3Q9UQE7 1217 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 GNEQ9Y223 722 aaKnown RBP11.36□□□□□ -0.59
TPM4-216ENST00000592822 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.36□□□□□ -0.59
TPM4-216ENST00000592822 UBIAD1Q9Y5Z9 338 aa11.36□□□□□ -0.59
TPM4-216ENST00000592822 SYNRGQ9UMZ2 1314 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 PGK1P00558 417 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 CYP3A4P08684 503 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 TXNP10599 105 aaKnown RBP11.35□□□□□ -0.59
TPM4-216ENST00000592822 ITGB5P18084 799 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 KRT2P35908 639 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 MNX1P50219 401 aaPredicted RBP11.35□□□□□ -0.59
TPM4-216ENST00000592822 IRX5P78411 483 aaPredicted RBP11.35□□□□□ -0.59
TPM4-216ENST00000592822 SEMA3FQ13275 785 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 NR5A1Q13285 461 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 TTLL4Q14679 1199 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 DUSP28Q4G0W2 176 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 HSCBQ8IWL3 235 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 FBXO18Q8NFZ0 1043 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 CYP2W1Q8TAV3 490 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 COPS5Q92905 334 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 TNFRSF25Q93038 417 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 XPNPEP3Q9NQH7 507 aa11.35□□□□□ -0.59
TPM4-216ENST00000592822 DDX41Q9UJV9 622 aaKnown RBP11.35□□□□□ -0.59
TPM4-216ENST00000592822 DOCK5Q9H7D0 1870 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 MYADML2A6NDP7 307 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 BTBD18B2RXH4 712 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 SPATA31C2B4DYI2 1134 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 CTAGE5O15320 804 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 DYNC1LI2O43237 492 aaPredicted RBP11.34□□□□□ -0.59
TPM4-216ENST00000592822 ADAMTS4O75173 837 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 ICAM3P32942 547 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 GJA9P57773 515 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 NKX3-2P78367 333 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 SP2Q02086 613 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 LY6KQ17RY6 165 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 GNPTABQ3T906 1256 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 EARS2Q5JPH6 523 aaKnown RBP11.34□□□□□ -0.59
TPM4-216ENST00000592822 KRT25Q7Z3Z0 450 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 DIS3L2Q8IYB7 885 aaKnown RBP11.34□□□□□ -0.59
TPM4-216ENST00000592822 INTS4Q96HW7 963 aaKnown RBP11.34□□□□□ -0.59
TPM4-216ENST00000592822 MXRA8Q9BRK3 442 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 UPF3AQ9H1J1 476 aaKnown RBP11.34□□□□□ -0.59
TPM4-216ENST00000592822 JADE2Q9NQC1 790 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 Q9Y3F1 56 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 MRVI1Q9Y6F6 885 aa11.34□□□□□ -0.59
TPM4-216ENST00000592822 MKI67P46013 3256 aaKnown RBP11.33□□□□□ -0.6
TPM4-216ENST00000592822 IGLV3-22A0A075B6J6 115 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 CCDC194A0A1B0GVG4 234 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 FAM205CA6NFA0 338 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 FAM86B1E9PN63 330 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 MEIS1O00470 390 aa11.33□□□□□ -0.6
TPM4-216ENST00000592822 NKRFO15226 690 aaKnown RBP eCLIP11.33□□□□□ -0.6
TPM4-216ENST00000592822 FIBPO43427 364 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms