RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 CAGE1Q8TC20 777 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 PHOSPHO2Q8TCD6 241 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 AFG1LQ8WV93 481 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 SYMPKQ92797 1274 aaKnown RBP21.92■■□□□ 1.1
CCDC43-205ENST00000592333 SCLYQ96I15 445 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 MTA3Q9BTC8 594 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 PCDHA1Q9Y5I3 950 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 KIAA1217Q5T5P2 1943 aa21.92■■□□□ 1.1
CCDC43-205ENST00000592333 OPLAHO14841 1288 aa21.91■■□□□ 1.1
CCDC43-205ENST00000592333 IQCF3P0C7M6 154 aa21.91■■□□□ 1.1
CCDC43-205ENST00000592333 TGFB3P10600 412 aa21.91■■□□□ 1.1
CCDC43-205ENST00000592333 GRM4Q14833 912 aa21.91■■□□□ 1.1
CCDC43-205ENST00000592333 LY6KQ17RY6 165 aa21.91■■□□□ 1.1
CCDC43-205ENST00000592333 RALYLQ86SE5 291 aaKnown RBP21.91■■□□□ 1.1
CCDC43-205ENST00000592333 KATNAL1Q9BW62 490 aa21.91■■□□□ 1.1
CCDC43-205ENST00000592333 NOD1Q9Y239 953 aa21.91■■□□□ 1.1
CCDC43-205ENST00000592333 IFIT3O14879 490 aaKnown RBP21.9■■□□□ 1.1
CCDC43-205ENST00000592333 SGSM2O43147 1006 aa21.9■■□□□ 1.1
CCDC43-205ENST00000592333 PPTC7Q8NI37 304 aa21.9■■□□□ 1.1
CCDC43-205ENST00000592333 AFAP1L1Q8TED9 768 aa21.9■■□□□ 1.1
CCDC43-205ENST00000592333 MAP3K14Q99558 947 aa21.9■■□□□ 1.1
CCDC43-205ENST00000592333 PDCD2LQ9BRP1 358 aa21.9■■□□□ 1.1
CCDC43-205ENST00000592333 MRVI1Q9Y6F6 885 aa21.9■■□□□ 1.1
CCDC43-205ENST00000592333 PPFIA4O75335 1185 aa21.89■■□□□ 1.09
CCDC43-205ENST00000592333 HOXD8P13378 290 aaPredicted RBP21.89■■□□□ 1.09
CCDC43-205ENST00000592333 ATP2A2P16615 1042 aaKnown RBP21.89■■□□□ 1.09
CCDC43-205ENST00000592333 EIF2AK2P19525 551 aaKnown RBP21.89■■□□□ 1.09
CCDC43-205ENST00000592333 RBL2Q08999 1139 aa21.89■■□□□ 1.09
CCDC43-205ENST00000592333 TROAPQ12815 778 aa21.89■■□□□ 1.09
CCDC43-205ENST00000592333 WTAPQ15007 396 aa21.89■■□□□ 1.09
CCDC43-205ENST00000592333 VSIG10LQ86VR7 867 aa21.89■■□□□ 1.09
CCDC43-205ENST00000592333 MAP4K1Q92918 833 aa21.89■■□□□ 1.09
CCDC43-205ENST00000592333 SLC9A7Q96T83 725 aa21.89■■□□□ 1.09
CCDC43-205ENST00000592333 CHD9Q3L8U1 2897 aa21.89■■□□□ 1.09
CCDC43-205ENST00000592333 PRUNE2Q8WUY3 3088 aa21.88■■□□□ 1.09
CCDC43-205ENST00000592333 PNMA6FA0A0J9YX94 578 aa21.88■■□□□ 1.09
CCDC43-205ENST00000592333 E7EWF7 191 aa21.88■■□□□ 1.09
CCDC43-205ENST00000592333 PPP1R11O60927 126 aaPredicted RBP21.88■■□□□ 1.09
CCDC43-205ENST00000592333 BAIAP3O94812 1187 aa21.88■■□□□ 1.09
CCDC43-205ENST00000592333 SMARCA1P28370 1054 aa21.88■■□□□ 1.09
CCDC43-205ENST00000592333 PTH1RQ03431 593 aa21.88■■□□□ 1.09
CCDC43-205ENST00000592333 PTGISQ16647 500 aa21.88■■□□□ 1.09
CCDC43-205ENST00000592333 DHX37Q8IY37 1157 aaKnown RBP21.88■■□□□ 1.09
CCDC43-205ENST00000592333 KAT2BQ92831 832 aa21.88■■□□□ 1.09
CCDC43-205ENST00000592333 PRDM12Q9H4Q4 367 aa21.88■■□□□ 1.09
CCDC43-205ENST00000592333 ZBBXA8MT70 800 aa21.87■■□□□ 1.09
CCDC43-205ENST00000592333 GCOM1H8Y6P7 765 aaPredicted RBP21.87■■□□□ 1.09
CCDC43-205ENST00000592333 STAM2O75886 525 aa21.87■■□□□ 1.09
CCDC43-205ENST00000592333 POLR2MP0CAP2 368 aa21.87■■□□□ 1.09
CCDC43-205ENST00000592333 CATIPQ7Z7H3 387 aa21.87■■□□□ 1.09
CCDC43-205ENST00000592333 NKX2-4Q9H2Z4 354 aa21.87■■□□□ 1.09
CCDC43-205ENST00000592333 GTF2IRD1Q9UHL9 959 aa21.87■■□□□ 1.09
CCDC43-205ENST00000592333 YBX2Q9Y2T7 364 aaKnown RBP21.87■■□□□ 1.09
CCDC43-205ENST00000592333 HAS3O00219 553 aa21.86■■□□□ 1.09
CCDC43-205ENST00000592333 F2P00734 622 aa21.86■■□□□ 1.09
CCDC43-205ENST00000592333 PGM5Q15124 567 aa21.86■■□□□ 1.09
CCDC43-205ENST00000592333 MYSM1Q5VVJ2 828 aa21.86■■□□□ 1.09
CCDC43-205ENST00000592333 DEFB128Q7Z7B8 93 aa21.86■■□□□ 1.09
CCDC43-205ENST00000592333 C7orf31Q8N865 590 aa21.86■■□□□ 1.09
CCDC43-205ENST00000592333 TANC1Q9C0D5 1861 aa21.86■■□□□ 1.09
CCDC43-205ENST00000592333 CCND2P30279 289 aa21.85■■□□□ 1.09
CCDC43-205ENST00000592333 TMEM67Q5HYA8 995 aa21.85■■□□□ 1.09
CCDC43-205ENST00000592333 PPP2R2DQ66LE6 453 aa21.85■■□□□ 1.09
CCDC43-205ENST00000592333 CHST3Q7LGC8 479 aa21.85■■□□□ 1.09
CCDC43-205ENST00000592333 TMTC2Q8N394 836 aa21.85■■□□□ 1.09
CCDC43-205ENST00000592333 IGDCC4Q8TDY8 1250 aa21.85■■□□□ 1.09
CCDC43-205ENST00000592333 ATXN2LQ8WWM7 1075 aaKnown RBP21.85■■□□□ 1.09
CCDC43-205ENST00000592333 CTAGE1Q96RT6 745 aa21.85■■□□□ 1.09
CCDC43-205ENST00000592333 PIGSQ96S52 555 aa21.85■■□□□ 1.09
CCDC43-205ENST00000592333 VCANP13611 3396 aa21.85■■□□□ 1.09
CCDC43-205ENST00000592333 KIF28PB7ZC32 967 aa21.84■■□□□ 1.09
CCDC43-205ENST00000592333 CYTH3O43739 400 aa21.84■■□□□ 1.09
CCDC43-205ENST00000592333 RGS20O76081 388 aa21.84■■□□□ 1.09
CCDC43-205ENST00000592333 SELPP16109 830 aa21.84■■□□□ 1.09
CCDC43-205ENST00000592333 POU3F3P20264 500 aaPredicted RBP21.84■■□□□ 1.09
CCDC43-205ENST00000592333 TJAP1Q5JTD0 557 aa21.84■■□□□ 1.09
CCDC43-205ENST00000592333 CELF3Q5SZQ8 465 aaKnown RBP21.84■■□□□ 1.09
CCDC43-205ENST00000592333 GDF6Q6KF10 455 aaPredicted RBP21.84■■□□□ 1.09
CCDC43-205ENST00000592333 HOMER1Q86YM7 354 aa21.84■■□□□ 1.09
CCDC43-205ENST00000592333 LZTS2Q9BRK4 669 aa21.84■■□□□ 1.09
CCDC43-205ENST00000592333 FTOQ9C0B1 505 aaKnown RBP eCLIP21.84■■□□□ 1.09
CCDC43-205ENST00000592333 FRMPD4Q14CM0 1322 aa21.83■■□□□ 1.09
CCDC43-205ENST00000592333 DDAH1O94760 285 aa21.83■■□□□ 1.09
CCDC43-205ENST00000592333 MYCLP12524 364 aaPredicted RBP21.83■■□□□ 1.09
CCDC43-205ENST00000592333 KIF5BP33176 963 aa21.83■■□□□ 1.09
CCDC43-205ENST00000592333 PSEN2P49810 448 aa21.83■■□□□ 1.09
CCDC43-205ENST00000592333 PTK7Q13308 1070 aa21.83■■□□□ 1.09
CCDC43-205ENST00000592333 MFSD10Q14728 455 aa21.83■■□□□ 1.09
CCDC43-205ENST00000592333 SLC35G1Q2M3R5 365 aa21.83■■□□□ 1.09
CCDC43-205ENST00000592333 GNPTABQ3T906 1256 aa21.83■■□□□ 1.09
CCDC43-205ENST00000592333 MB21D2Q8IYB1 491 aaPredicted RBP21.83■■□□□ 1.09
CCDC43-205ENST00000592333 SPZ1Q9BXG8 430 aa21.83■■□□□ 1.09
CCDC43-205ENST00000592333 GBF1Q92538 1859 aa21.83■■□□□ 1.08
CCDC43-205ENST00000592333 EFCAB14O75071 495 aa21.82■■□□□ 1.08
CCDC43-205ENST00000592333 CXCL10P02778 98 aa21.82■■□□□ 1.08
CCDC43-205ENST00000592333 HOXA13P31271 388 aaPredicted RBP21.82■■□□□ 1.08
CCDC43-205ENST00000592333 GNAQP50148 359 aa21.82■■□□□ 1.08
CCDC43-205ENST00000592333 RABGGTBP53611 331 aa21.82■■□□□ 1.08
CCDC43-205ENST00000592333 ADGRE1Q14246 886 aa21.82■■□□□ 1.08
CCDC43-205ENST00000592333 KIAA0753Q2KHM9 967 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms