RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 IL25Q9H293 177 aa22.86■■□□□ 1.25
TNFRSF11A-204ENST00000592013 RIOX1Q9H6W3 641 aa22.86■■□□□ 1.25
TNFRSF11A-204ENST00000592013 SLC28A3Q9HAS3 691 aa22.86■■□□□ 1.25
TNFRSF11A-204ENST00000592013 TRMT13Q9NUP7 481 aaKnown RBP22.86■■□□□ 1.25
TNFRSF11A-204ENST00000592013 MMP3P08254 477 aa22.85■■□□□ 1.25
TNFRSF11A-204ENST00000592013 PTGS1P23219 599 aa22.85■■□□□ 1.25
TNFRSF11A-204ENST00000592013 SMARCA1P28370 1054 aa22.85■■□□□ 1.25
TNFRSF11A-204ENST00000592013 CCND2P30279 289 aa22.85■■□□□ 1.25
TNFRSF11A-204ENST00000592013 GNPTABQ3T906 1256 aa22.85■■□□□ 1.25
TNFRSF11A-204ENST00000592013 OTOP2Q7RTS6 562 aa22.85■■□□□ 1.25
TNFRSF11A-204ENST00000592013 PPTC7Q8NI37 304 aa22.85■■□□□ 1.25
TNFRSF11A-204ENST00000592013 TBC1D5Q92609 795 aa22.85■■□□□ 1.25
TNFRSF11A-204ENST00000592013 PBX4Q9BYU1 374 aa22.85■■□□□ 1.25
TNFRSF11A-204ENST00000592013 SEC63Q9UGP8 760 aaKnown RBP22.85■■□□□ 1.25
TNFRSF11A-204ENST00000592013 DDX41Q9UJV9 622 aaKnown RBP22.85■■□□□ 1.25
TNFRSF11A-204ENST00000592013 ZBBXA8MT70 800 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 DDAH1O94760 285 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 CALM1P0DP23 149 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 CALM2P0DP24 149 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 CALM3P0DP25 149 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 ARHGAP1Q07960 439 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 TROAPQ12815 778 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 LY6KQ17RY6 165 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 C7orf31Q8N865 590 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 COPS5Q92905 334 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 CUL5Q93034 780 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 PDCD2LQ9BRP1 358 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 WNT8AQ9H1J5 351 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 COL20A1Q9P218 1284 aa22.84■■□□□ 1.25
TNFRSF11A-204ENST00000592013 ARIH2O95376 493 aa22.83■■□□□ 1.25
TNFRSF11A-204ENST00000592013 CYP2C9P11712 490 aa22.83■■□□□ 1.25
TNFRSF11A-204ENST00000592013 MCM5P33992 734 aa22.83■■□□□ 1.25
TNFRSF11A-204ENST00000592013 CHMP4BP1P59074 171 aa22.83■■□□□ 1.25
TNFRSF11A-204ENST00000592013 IRX6P78412 446 aaPredicted RBP22.83■■□□□ 1.25
TNFRSF11A-204ENST00000592013 PTGISQ16647 500 aa22.83■■□□□ 1.25
TNFRSF11A-204ENST00000592013 RNF20Q5VTR2 975 aa22.83■■□□□ 1.25
TNFRSF11A-204ENST00000592013 CHST3Q7LGC8 479 aa22.83■■□□□ 1.25
TNFRSF11A-204ENST00000592013 AFAP1L1Q8TED9 768 aa22.83■■□□□ 1.25
TNFRSF11A-204ENST00000592013 RRP36Q96EU6 259 aaKnown RBP22.83■■□□□ 1.25
TNFRSF11A-204ENST00000592013 TMEM87BQ96K49 555 aa22.83■■□□□ 1.25
TNFRSF11A-204ENST00000592013 RBM8AQ9Y5S9 174 aaKnown RBP22.83■■□□□ 1.25
TNFRSF11A-204ENST00000592013 SCN10AQ9Y5Y9 1956 aa22.83■■□□□ 1.24
TNFRSF11A-204ENST00000592013 PPFIA4O75335 1185 aa22.82■■□□□ 1.24
TNFRSF11A-204ENST00000592013 MYCLP12524 364 aaPredicted RBP22.82■■□□□ 1.24
TNFRSF11A-204ENST00000592013 VSIG10LQ86VR7 867 aa22.82■■□□□ 1.24
TNFRSF11A-204ENST00000592013 PHOSPHO2Q8TCD6 241 aa22.82■■□□□ 1.24
TNFRSF11A-204ENST00000592013 PIGSQ96S52 555 aa22.82■■□□□ 1.24
TNFRSF11A-204ENST00000592013 PCDHA11Q9Y5I1 949 aa22.82■■□□□ 1.24
TNFRSF11A-204ENST00000592013 UMODL1Q5DID0 1318 aa22.82■■□□□ 1.24
TNFRSF11A-204ENST00000592013 CCDC69A6NI79 296 aa22.81■■□□□ 1.24
TNFRSF11A-204ENST00000592013 ATP2A2P16615 1042 aaKnown RBP22.81■■□□□ 1.24
TNFRSF11A-204ENST00000592013 GRIN2CQ14957 1233 aa22.81■■□□□ 1.24
TNFRSF11A-204ENST00000592013 NFXL1Q6ZNB6 911 aa22.81■■□□□ 1.24
TNFRSF11A-204ENST00000592013 SCLYQ96I15 445 aa22.81■■□□□ 1.24
TNFRSF11A-204ENST00000592013 SLC9A7Q96T83 725 aa22.81■■□□□ 1.24
TNFRSF11A-204ENST00000592013 SPZ1Q9BXG8 430 aa22.81■■□□□ 1.24
TNFRSF11A-204ENST00000592013 FTOQ9C0B1 505 aaKnown RBP eCLIP22.81■■□□□ 1.24
TNFRSF11A-204ENST00000592013 KIAA1217Q5T5P2 1943 aa22.8■■□□□ 1.24
TNFRSF11A-204ENST00000592013 KIF28PB7ZC32 967 aa22.8■■□□□ 1.24
TNFRSF11A-204ENST00000592013 BAIAP3O94812 1187 aa22.8■■□□□ 1.24
TNFRSF11A-204ENST00000592013 PGM5Q15124 567 aa22.8■■□□□ 1.24
TNFRSF11A-204ENST00000592013 XRRA1Q6P2D8 792 aa22.8■■□□□ 1.24
TNFRSF11A-204ENST00000592013 MB21D2Q8IYB1 491 aaPredicted RBP22.8■■□□□ 1.24
TNFRSF11A-204ENST00000592013 IGDCC4Q8TDY8 1250 aa22.8■■□□□ 1.24
TNFRSF11A-204ENST00000592013 SYMPKQ92797 1274 aaKnown RBP22.8■■□□□ 1.24
TNFRSF11A-204ENST00000592013 OPLAHO14841 1288 aa22.79■■□□□ 1.24
TNFRSF11A-204ENST00000592013 IQCF3P0C7M6 154 aa22.79■■□□□ 1.24
TNFRSF11A-204ENST00000592013 HOXA13P31271 388 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF11A-204ENST00000592013 DEFB128Q7Z7B8 93 aa22.79■■□□□ 1.24
TNFRSF11A-204ENST00000592013 ZNF654Q8IZM8 581 aa22.79■■□□□ 1.24
TNFRSF11A-204ENST00000592013 SPATA33Q96N06 139 aa22.79■■□□□ 1.24
TNFRSF11A-204ENST00000592013 MLXIPQ9HAP2 919 aa22.79■■□□□ 1.24
TNFRSF11A-204ENST00000592013 CXXC1Q9P0U4 656 aaPredicted RBP22.79■■□□□ 1.24
TNFRSF11A-204ENST00000592013 PRC1O43663 620 aa22.78■■□□□ 1.24
TNFRSF11A-204ENST00000592013 PPP1R11O60927 126 aaPredicted RBP22.78■■□□□ 1.24
TNFRSF11A-204ENST00000592013 F2P00734 622 aa22.78■■□□□ 1.24
TNFRSF11A-204ENST00000592013 NEDD9Q14511 834 aa22.78■■□□□ 1.24
TNFRSF11A-204ENST00000592013 CELF3Q5SZQ8 465 aaKnown RBP22.78■■□□□ 1.24
TNFRSF11A-204ENST00000592013 SYNE3Q6ZMZ3 975 aa22.78■■□□□ 1.24
TNFRSF11A-204ENST00000592013 FCHSD1Q86WN1 690 aa22.78■■□□□ 1.24
TNFRSF11A-204ENST00000592013 SMARCC2Q8TAQ2 1214 aa22.78■■□□□ 1.24
TNFRSF11A-204ENST00000592013 GTF2IRD1Q9UHL9 959 aa22.78■■□□□ 1.24
TNFRSF11A-204ENST00000592013 GRXCR1A8MXD5 290 aa22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 NOP56O00567 594 aaKnown RBP22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 EFCAB14O75071 495 aa22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 SELPP16109 830 aa22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 PBX2P40425 430 aa22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 LIFRP42702 1097 aa22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 KCNJ6P48051 423 aa22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 PSEN2P49810 448 aa22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 MFSD10Q14728 455 aa22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 MYSM1Q5VVJ2 828 aa22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 PPP2R2DQ66LE6 453 aa22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 CENPQQ7L2Z9 268 aaPredicted RBP22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 TEX2Q8IWB9 1127 aa22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 GIMAP8Q8ND71 665 aaPredicted RBP22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 TSPYL2Q9H2G4 693 aaPredicted RBP22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 SLC12A7Q9Y666 1083 aa22.77■■□□□ 1.24
TNFRSF11A-204ENST00000592013 GGPS1O95749 300 aa22.76■■□□□ 1.23
TNFRSF11A-204ENST00000592013 HOXD8P13378 290 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms