RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SMARCC2Q8TAQ2 1214 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 SCFD2Q8WU76 684 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 PPP1R13LQ8WUF5 828 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 IWS1Q96ST2 819 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 HTATIP2Q9BUP3 242 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 MAF1Q9H063 256 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 ALDH8A1Q9H2A2 487 aaPredicted RBP13.26□□□□□ -0.29
VMP1-211ENST00000591315 RTN4Q9NQC3 1192 aaKnown RBP13.26□□□□□ -0.29
VMP1-211ENST00000591315 FOXD4L1Q9NU39 408 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 BARHL2Q9NY43 387 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 RTEL1Q9NZ71 1219 aa13.26□□□□□ -0.29
VMP1-211ENST00000591315 ZMYND8Q9ULU4 1186 aaPredicted RBP13.26□□□□□ -0.29
VMP1-211ENST00000591315 DOCK5Q9H7D0 1870 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 FRMPD4Q14CM0 1322 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 SMCO2A6NFE2 343 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 EVI5O60447 810 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 EIF3JO75822 258 aaKnown RBP13.25□□□□□ -0.29
VMP1-211ENST00000591315 ASGR1P07306 291 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 TXNP10599 105 aaKnown RBP13.25□□□□□ -0.29
VMP1-211ENST00000591315 RTP1P59025 263 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 PPP2R5BQ15173 497 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 FSCN1Q16658 493 aaKnown RBP13.25□□□□□ -0.29
VMP1-211ENST00000591315 ME3Q16798 604 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 CXCL17Q6UXB2 119 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 SLC39A5Q6ZMH5 540 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 OR6J1Q8NGC5 347 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 CUL5Q93034 780 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 C22orf23Q9BZE7 217 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 AP5M1Q9H0R1 490 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 MAP3K20Q9NYL2 800 aaKnown RBP13.25□□□□□ -0.29
VMP1-211ENST00000591315 TELO2Q9Y4R8 837 aa13.25□□□□□ -0.29
VMP1-211ENST00000591315 PFKFB2O60825 505 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 CTDNEP1O95476 244 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 SYN1P17600 705 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 CST5P28325 142 aaPredicted RBP13.24□□□□□ -0.29
VMP1-211ENST00000591315 CCND2P30279 289 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 ADCY7P51828 1080 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 NKX3-2P78367 333 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 SP2Q02086 613 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 ARHGAP1Q07960 439 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 ST3GAL1Q11201 340 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 SEMA3FQ13275 785 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 TRIM60Q495X7 471 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 SAMD3Q8N6K7 520 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 RASGRP4Q8TDF6 673 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 MPHOSPH6Q99547 160 aaKnown RBP13.24□□□□□ -0.29
VMP1-211ENST00000591315 RIC8AQ9NPQ8 531 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 VPS54Q9P1Q0 977 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 DDX41Q9UJV9 622 aaKnown RBP13.24□□□□□ -0.29
VMP1-211ENST00000591315 PCDHA6Q9UN73 950 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 ATP11BQ9Y2G3 1177 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 PCDHA8Q9Y5H6 950 aa13.24□□□□□ -0.29
VMP1-211ENST00000591315 GRIN2DO15399 1336 aa13.23□□□□□ -0.29
VMP1-211ENST00000591315 B4DLN1 442 aa13.23□□□□□ -0.29
VMP1-211ENST00000591315 RBAK-RBAKDNI3L0D1 243 aa13.23□□□□□ -0.29
VMP1-211ENST00000591315 MRPL12P52815 198 aaKnown RBP13.23□□□□□ -0.29
VMP1-211ENST00000591315 PSMC6P62333 389 aa13.23□□□□□ -0.29
VMP1-211ENST00000591315 TLE2Q04725 743 aa13.23□□□□□ -0.29
VMP1-211ENST00000591315 SSRP1Q08945 709 aaKnown RBP13.23□□□□□ -0.29
VMP1-211ENST00000591315 TTLL4Q14679 1199 aa13.23□□□□□ -0.29
VMP1-211ENST00000591315 JAKMIP3Q5VZ66 844 aa13.23□□□□□ -0.29
VMP1-211ENST00000591315 AFG1LQ8WV93 481 aa13.23□□□□□ -0.29
VMP1-211ENST00000591315 TSEN34Q9BSV6 310 aaKnown RBP13.23□□□□□ -0.29
VMP1-211ENST00000591315 RNF26Q9BY78 433 aaPredicted RBP13.23□□□□□ -0.29
VMP1-211ENST00000591315 SLKQ9H2G2 1235 aaPredicted RBP13.23□□□□□ -0.29
VMP1-211ENST00000591315 SPC25Q9HBM1 224 aa13.23□□□□□ -0.29
VMP1-211ENST00000591315 GJB4Q9NTQ9 266 aa13.23□□□□□ -0.29
VMP1-211ENST00000591315 MRVI1Q9Y6F6 885 aa13.23□□□□□ -0.29
VMP1-211ENST00000591315 CPLX1O14810 134 aa13.22□□□□□ -0.29
VMP1-211ENST00000591315 MYL3P08590 195 aa13.22□□□□□ -0.29
VMP1-211ENST00000591315 RBM25P49756 843 aaKnown RBP13.22□□□□□ -0.29
VMP1-211ENST00000591315 AKAP17AQ02040 695 aaKnown RBP13.22□□□□□ -0.29
VMP1-211ENST00000591315 SNX17Q15036 470 aa13.22□□□□□ -0.29
VMP1-211ENST00000591315 PRPF38BQ5VTL8 546 aaKnown RBP13.22□□□□□ -0.29
VMP1-211ENST00000591315 PPP1R18Q6NYC8 613 aa13.22□□□□□ -0.29
VMP1-211ENST00000591315 SH3RF1Q7Z6J0 888 aa13.22□□□□□ -0.29
VMP1-211ENST00000591315 CYP2W1Q8TAV3 490 aa13.22□□□□□ -0.29
VMP1-211ENST00000591315 VTI1AQ96AJ9 217 aa13.22□□□□□ -0.29
VMP1-211ENST00000591315 STARD7Q9NQZ5 370 aa13.22□□□□□ -0.29
VMP1-211ENST00000591315 Q9Y3F1 56 aa13.22□□□□□ -0.29
VMP1-211ENST00000591315 MOXD2PA6NHM9 499 aa13.21□□□□□ -0.29
VMP1-211ENST00000591315 JAK2O60674 1132 aa13.21□□□□□ -0.29
VMP1-211ENST00000591315 PQBP1O60828 265 aaKnown RBP13.21□□□□□ -0.29
VMP1-211ENST00000591315 EIF5BO60841 1220 aaKnown RBP13.21□□□□□ -0.29
VMP1-211ENST00000591315 GH1P01241 217 aa13.21□□□□□ -0.29
VMP1-211ENST00000591315 ITGB5P18084 799 aa13.21□□□□□ -0.29
VMP1-211ENST00000591315 UBA1P22314 1058 aaKnown RBP13.21□□□□□ -0.29
VMP1-211ENST00000591315 CLK2P49760 499 aaKnown RBP13.21□□□□□ -0.29
VMP1-211ENST00000591315 PCNX4Q63HM2 1172 aa13.21□□□□□ -0.29
VMP1-211ENST00000591315 PCSK9Q8NBP7 692 aaKnown RBP13.21□□□□□ -0.29
VMP1-211ENST00000591315 GTF3C6Q969F1 213 aa13.21□□□□□ -0.29
VMP1-211ENST00000591315 INPP4AQ96PE3 977 aaPredicted RBP13.21□□□□□ -0.29
VMP1-211ENST00000591315 UIMC1Q96RL1 719 aa13.21□□□□□ -0.29
VMP1-211ENST00000591315 ANO3Q9BYT9 981 aa13.21□□□□□ -0.29
VMP1-211ENST00000591315 PKD2L1Q9P0L9 805 aa13.21□□□□□ -0.29
VMP1-211ENST00000591315 A6NJR5 290 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 SPDYE3A6NKU9 549 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 hCG_1984214I3L0E3 225 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 EDIL3O43854 480 aa13.2□□□□□ -0.3
VMP1-211ENST00000591315 ATP9AO75110 1047 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms