RNA–Protein interactions for RNA: ENST00000590498.5

TUBD1-210, Transcript of tubulin delta 1, humanhuman

TSL 4

Gene TUBD1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-210ENST00000590498 PDE1AP54750 535 aa12.48□□□□□ -0.41
TUBD1-210ENST00000590498 PDE4DQ08499 809 aa12.48□□□□□ -0.41
TUBD1-210ENST00000590498 PPP2R5BQ15173 497 aa12.48□□□□□ -0.41
TUBD1-210ENST00000590498 MCMDC2Q4G0Z9 681 aa12.48□□□□□ -0.41
TUBD1-210ENST00000590498 ANKRD45Q5TZF3 282 aa12.48□□□□□ -0.41
TUBD1-210ENST00000590498 HERC6Q8IVU3 1022 aa12.48□□□□□ -0.41
TUBD1-210ENST00000590498 PHOSPHO2Q8TCD6 241 aa12.48□□□□□ -0.41
TUBD1-210ENST00000590498 SCFD2Q8WU76 684 aa12.48□□□□□ -0.41
TUBD1-210ENST00000590498 DHX38Q92620 1227 aaKnown RBP12.48□□□□□ -0.41
TUBD1-210ENST00000590498 KAT2BQ92831 832 aa12.48□□□□□ -0.41
TUBD1-210ENST00000590498 UBA5Q9GZZ9 404 aa12.48□□□□□ -0.41
TUBD1-210ENST00000590498 TOMM22Q9NS69 142 aa12.48□□□□□ -0.41
TUBD1-210ENST00000590498 SCN10AQ9Y5Y9 1956 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 WDR19Q8NEZ3 1342 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 LCHNA4D1U4 455 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 NKRFO15226 690 aaKnown RBP eCLIP12.47□□□□□ -0.41
TUBD1-210ENST00000590498 TLL1O43897 1013 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 RFC2P35250 354 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 PTPN11Q06124 597 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-210ENST00000590498 ARHGAP1Q07960 439 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 NMIQ13287 307 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-210ENST00000590498 LY6KQ17RY6 165 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 GDF6Q6KF10 455 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-210ENST00000590498 RGS22Q8NE09 1264 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 DNERQ8NFT8 737 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 AFG1LQ8WV93 481 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 ARNTL2Q8WYA1 636 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 KHSRPQ92945 711 aaKnown RBP eCLIP12.47□□□□□ -0.411e-7■■■■□ 24
TUBD1-210ENST00000590498 TTC14Q96N46 770 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 TAAR1Q96RJ0 339 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 ZKSCAN3Q9BRR0 538 aa12.47□□□□□ -0.41
TUBD1-210ENST00000590498 GPHNQ9NQX3 736 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-210ENST00000590498 NEDD4P46934 1319 aa12.46□□□□□ -0.41
TUBD1-210ENST00000590498 KPNA6O60684 536 aa12.46□□□□□ -0.41
TUBD1-210ENST00000590498 GRB10Q13322 594 aa12.46□□□□□ -0.41
TUBD1-210ENST00000590498 USH1GQ495M9 461 aa12.46□□□□□ -0.41
TUBD1-210ENST00000590498 SYTL5Q8TDW5 730 aaPredicted RBP12.46□□□□□ -0.41
TUBD1-210ENST00000590498 SLC9A7Q96T83 725 aa12.46□□□□□ -0.41
TUBD1-210ENST00000590498 FTOQ9C0B1 505 aaKnown RBP eCLIP12.46□□□□□ -0.41
TUBD1-210ENST00000590498 EPHX3Q9H6B9 360 aa12.46□□□□□ -0.41
TUBD1-210ENST00000590498 TCF20Q9UGU0 1960 aaKnown RBP12.45□□□□□ -0.42
TUBD1-210ENST00000590498 PTPRSQ13332 1948 aa12.45□□□□□ -0.42
TUBD1-210ENST00000590498 ZMYM6O95789 1325 aa12.45□□□□□ -0.42
TUBD1-210ENST00000590498 NBNO60934 754 aa12.45□□□□□ -0.42
TUBD1-210ENST00000590498 MMP3P08254 477 aa12.45□□□□□ -0.42
TUBD1-210ENST00000590498 ACTN1P12814 892 aa12.45□□□□□ -0.42
TUBD1-210ENST00000590498 CHMP4BP1P59074 171 aa12.45□□□□□ -0.42
TUBD1-210ENST00000590498 DEFB103AP81534 67 aa12.45□□□□□ -0.42
TUBD1-210ENST00000590498 HIC1Q14526 733 aa12.45□□□□□ -0.42
TUBD1-210ENST00000590498 SKIV2LQ15477 1246 aaKnown RBP12.45□□□□□ -0.42
TUBD1-210ENST00000590498 PTGISQ16647 500 aa12.45□□□□□ -0.42
TUBD1-210ENST00000590498 TRAF7Q6Q0C0 670 aa12.45□□□□□ -0.42
TUBD1-210ENST00000590498 RETREG2Q8NC44 543 aa12.45□□□□□ -0.42
TUBD1-210ENST00000590498 WNT8BQ93098 351 aa12.45□□□□□ -0.42
TUBD1-210ENST00000590498 WDR5P61964 334 aaKnown RBP12.44□□□□□ -0.42
TUBD1-210ENST00000590498 BFSP2Q13515 415 aa12.44□□□□□ -0.42
TUBD1-210ENST00000590498 MFSD6Q6ZSS7 791 aa12.44□□□□□ -0.42
TUBD1-210ENST00000590498 SEPT14Q6ZU15 432 aa12.44□□□□□ -0.42
TUBD1-210ENST00000590498 SESTD1Q86VW0 696 aa12.44□□□□□ -0.42
TUBD1-210ENST00000590498 ADGRF4Q8IZF3 695 aa12.44□□□□□ -0.42
TUBD1-210ENST00000590498 EFCAB3Q8N7B9 438 aa12.44□□□□□ -0.42
TUBD1-210ENST00000590498 CD320Q9NPF0 282 aa12.44□□□□□ -0.42
TUBD1-210ENST00000590498 DDX41Q9UJV9 622 aaKnown RBP12.44□□□□□ -0.42
TUBD1-210ENST00000590498 TANC1Q9C0D5 1861 aa12.44□□□□□ -0.42
TUBD1-210ENST00000590498 CCDC171Q6TFL3 1326 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 TET1Q8NFU7 2136 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 OPLAHO14841 1288 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 BAIAP3O94812 1187 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 CXCL10P02778 98 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 CKBP12277 381 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 ZNF200P98182 395 aaPredicted RBP12.43□□□□□ -0.42
TUBD1-210ENST00000590498 MBTPS1Q14703 1052 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 CDC37Q16543 378 aaPredicted RBP12.43□□□□□ -0.42
TUBD1-210ENST00000590498 TRIM71Q2Q1W2 868 aaKnown RBP12.43□□□□□ -0.42
TUBD1-210ENST00000590498 BRDTQ58F21 947 aaPredicted RBP12.43□□□□□ -0.42
TUBD1-210ENST00000590498 CHST3Q7LGC8 479 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 DGKHQ86XP1 1220 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 IL27Q8NEV9 243 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 ANKS1AQ92625 1134 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 CRBNQ96SW2 442 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 HDAC6Q9UBN7 1215 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 PNMA2Q9UL42 364 aa12.43□□□□□ -0.42
TUBD1-210ENST00000590498 RAD50Q92878 1312 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 HAS3O00219 553 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 GTPBP6O43824 516 aaPredicted RBP12.42□□□□□ -0.42
TUBD1-210ENST00000590498 RGS20O76081 388 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 GH1P01241 217 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 SELPP16109 830 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 PLA2G5P39877 138 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 RBL2Q08999 1139 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 HDAC1Q13547 482 aaPredicted RBP12.42□□□□□ -0.42
TUBD1-210ENST00000590498 AAK1Q2M2I8 961 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 QRICH1Q2TAL8 776 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 GPATCH4Q5T3I0 446 aaKnown RBP12.42□□□□□ -0.42
TUBD1-210ENST00000590498 LRRC8DQ7L1W4 858 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 PNMA1Q8ND90 353 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 CAGE1Q8TC20 777 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 NSUN6Q8TEA1 469 aaKnown RBP12.42□□□□□ -0.42
TUBD1-210ENST00000590498 AFAP1L1Q8TED9 768 aa12.42□□□□□ -0.42
TUBD1-210ENST00000590498 RMDN3Q96TC7 470 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms