RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 DEF6Q9H4E7 631 aa23.16■■□□□ 1.3
ZNF554-203ENST00000590116 TAF1LQ8IZX4 1826 aa23.16■■□□□ 1.3
ZNF554-203ENST00000590116 CAPN2P17655 700 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 EZH2Q15910 746 aaKnown RBP23.15■■□□□ 1.3
ZNF554-203ENST00000590116 MAN2A1Q16706 1144 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 MAP9Q49MG5 647 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 GUF1Q8N442 669 aaKnown RBP23.15■■□□□ 1.3
ZNF554-203ENST00000590116 ANKRD13CQ8N6S4 541 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 RAD54LQ92698 747 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 DDX12PQ92771 950 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 EHD2Q9NZN4 543 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 POLLQ9UGP5 575 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 PCDHA13Q9Y5I0 950 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 TARSL2A2RTX5 802 aaKnown RBP23.15■■□□□ 1.3
ZNF554-203ENST00000590116 PPP1R11O60927 126 aaPredicted RBP23.15■■□□□ 1.3
ZNF554-203ENST00000590116 HNRNPH3P31942 346 aaKnown RBP23.15■■□□□ 1.3
ZNF554-203ENST00000590116 NOVP48745 357 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 COG1Q8WTW3 980 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 IQCDQ96DY2 449 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 RAB34Q9BZG1 259 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 MTMR4Q9NYA4 1195 aa23.15■■□□□ 1.3
ZNF554-203ENST00000590116 USO1O60763 962 aaKnown RBP23.14■■□□□ 1.29
ZNF554-203ENST00000590116 CXCR5P32302 372 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 VPS72Q15906 364 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 KRT79Q5XKE5 535 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 TTBK2Q6IQ55 1244 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 GOLGA5Q8TBA6 731 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 MED4Q9NPJ6 270 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 NHSQ6T4R5 1651 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 hCG_1984214I3L0E3 225 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 ATP2B4P23634 1241 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 SLC16A2P36021 539 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 IRX5P78411 483 aaPredicted RBP23.14■■□□□ 1.29
ZNF554-203ENST00000590116 LRRC55Q6ZSA7 311 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 ZNF713Q8N859 430 aaPredicted RBP23.14■■□□□ 1.29
ZNF554-203ENST00000590116 TRIM58Q8NG06 486 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 FGFBP2Q9BYJ0 223 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 TANGO6Q9C0B7 1094 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 SH2D4AQ9H788 454 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 TBC1D7Q9P0N9 293 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 DAGLAQ9Y4D2 1042 aa23.14■■□□□ 1.29
ZNF554-203ENST00000590116 AKR1B10O60218 316 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 CCDC84Q86UT8 332 aaPredicted RBP23.13■■□□□ 1.29
ZNF554-203ENST00000590116 FAM204AQ9H8W3 233 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 HPCAL4Q9UM19 191 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 SNX12Q9UMY4 172 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 JRKLQ9Y4A0 524 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 NCK2O43639 380 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 TACC1O75410 805 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 FGFR1OPO95684 399 aaKnown RBP23.13■■□□□ 1.29
ZNF554-203ENST00000590116 ACTN2P35609 894 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 LRRC63Q05C16 580 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 ASPRV1Q53RT3 343 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 NFRKBQ6P4R8 1299 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.13■■□□□ 1.29
ZNF554-203ENST00000590116 SLF2Q8IX21 1173 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 HDAC7Q8WUI4 952 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 FAM163AQ96GL9 167 aaPredicted RBP23.13■■□□□ 1.29
ZNF554-203ENST00000590116 VIPAS39Q9H9C1 493 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 KANSL2Q9H9L4 492 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 SALL4Q9UJQ4 1053 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 GAKO14976 1311 aa23.13■■□□□ 1.29
ZNF554-203ENST00000590116 RNF40O75150 1001 aa23.12■■□□□ 1.29
ZNF554-203ENST00000590116 SYF2O95926 243 aaKnown RBP23.12■■□□□ 1.29
ZNF554-203ENST00000590116 SSBP05455 408 aaKnown RBP eCLIP23.12■■□□□ 1.29
ZNF554-203ENST00000590116 MATR3P43243 847 aaKnown RBP eCLIP23.12■■□□□ 1.29
ZNF554-203ENST00000590116 GTF2IP78347 998 aa23.12■■□□□ 1.29
ZNF554-203ENST00000590116 CACNB1Q02641 598 aaPredicted RBP23.12■■□□□ 1.29
ZNF554-203ENST00000590116 PDIA5Q14554 519 aa23.12■■□□□ 1.29
ZNF554-203ENST00000590116 FNBP4Q8N3X1 1017 aaPredicted RBP23.12■■□□□ 1.29
ZNF554-203ENST00000590116 DDX4Q9NQI0 724 aaKnown RBP23.12■■□□□ 1.29
ZNF554-203ENST00000590116 C6orf229H3BNL8 230 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 APBA1Q02410 837 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 GFPT1Q06210 699 aaPredicted RBP23.11■■□□□ 1.29
ZNF554-203ENST00000590116 FOXR1Q6PIV2 292 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 CREG2Q8IUH2 290 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 ZC3H4Q9UPT8 1303 aaKnown RBP23.11■■□□□ 1.29
ZNF554-203ENST00000590116 RIMBP2O15034 1052 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 IQCEQ6IPM2 695 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 LEKR1Q6ZMV7 388 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 TMC4Q7Z404 712 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 ADGRF4Q8IZF3 695 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 TBC1D16Q8TBP0 767 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 BAP1Q92560 729 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 MXD3Q9BW11 206 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 JMJD4Q9H9V9 463 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 NLRC4Q9NPP4 1024 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 MYH7BA7E2Y1 1941 aa23.11■■□□□ 1.29
ZNF554-203ENST00000590116 SELENOOQ9BVL4 669 aa23.1■■□□□ 1.29
ZNF554-203ENST00000590116 ABCB11O95342 1321 aa23.1■■□□□ 1.29
ZNF554-203ENST00000590116 AARSP49588 968 aaKnown RBP eCLIP23.1■■□□□ 1.29
ZNF554-203ENST00000590116 TMEM119Q4V9L6 283 aa23.1■■□□□ 1.29
ZNF554-203ENST00000590116 HAS1Q92839 578 aa23.1■■□□□ 1.29
ZNF554-203ENST00000590116 TSG101Q99816 390 aa23.1■■□□□ 1.29
ZNF554-203ENST00000590116 DDX25Q9UHL0 483 aaKnown RBP23.1■■□□□ 1.29
ZNF554-203ENST00000590116 LCMT1Q9UIC8 334 aa23.1■■□□□ 1.29
ZNF554-203ENST00000590116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.09■■□□□ 1.29
ZNF554-203ENST00000590116 EHHADHQ08426 723 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 COASYQ13057 564 aa23.09■■□□□ 1.29
ZNF554-203ENST00000590116 KCTD1Q719H9 257 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms