RNA–Protein interactions for RNA: ENST00000589675.5

DDX39A-210, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-210ENST00000589675 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.95□□□□□ -0.34
DDX39A-210ENST00000589675 MAFAQ8NHW3 353 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-210ENST00000589675 IGDCC4Q8TDY8 1250 aa12.95□□□□□ -0.34
DDX39A-210ENST00000589675 CXXC1Q9P0U4 656 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-210ENST00000589675 TANC1Q9C0D5 1861 aa12.95□□□□□ -0.34
DDX39A-210ENST00000589675 SPTBN5Q9NRC6 3674 aaKnown RBP12.94□□□□□ -0.34
DDX39A-210ENST00000589675 REV3LO60673 3130 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 PNMA6FA0A0J9YX94 578 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 TGFB3P10600 412 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 CYP2C9P11712 490 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 FOSL2P15408 326 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 EIF2AK2P19525 551 aaKnown RBP12.94□□□□□ -0.34
DDX39A-210ENST00000589675 CASTP20810 708 aaKnown RBP12.94□□□□□ -0.34
DDX39A-210ENST00000589675 SMARCA1P28370 1054 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 IRX6P78412 446 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-210ENST00000589675 LAMC2Q13753 1193 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 GRIN2CQ14957 1233 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 CATIPQ7Z7H3 387 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 VSIG10LQ86VR7 867 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 MB21D2Q8IYB1 491 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-210ENST00000589675 AFG1LQ8WV93 481 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 PDCD2LQ9BRP1 358 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 MSRAQ9UJ68 235 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 TAF6LQ9Y6J9 622 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 TET1Q8NFU7 2136 aa12.94□□□□□ -0.34
DDX39A-210ENST00000589675 GRXCR1A8MXD5 290 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 CYTH3O43739 400 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 HOXD8P13378 290 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-210ENST00000589675 PBX2P40425 430 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 ANTXR2P58335 489 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 BFSP2Q13515 415 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 DGKDQ16760 1214 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 FAM47CQ5HY64 1035 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 TMEM67Q5HYA8 995 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 OTOP2Q7RTS6 562 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 TMTC2Q8N394 836 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 PPTC7Q8NI37 304 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 KAT2BQ92831 832 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 SCLYQ96I15 445 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 PIGSQ96S52 555 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 SENP2Q9HC62 589 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 RBM8AQ9Y5S9 174 aaKnown RBP12.93□□□□□ -0.34
DDX39A-210ENST00000589675 SLC4A7Q9Y6M7 1214 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 TTC28Q96AY4 2481 aa12.93□□□□□ -0.34
DDX39A-210ENST00000589675 GCOM1H8Y6P7 765 aaPredicted RBP12.92□□□□□ -0.34
DDX39A-210ENST00000589675 PPFIA4O75335 1185 aa12.92□□□□□ -0.34
DDX39A-210ENST00000589675 RGS20O76081 388 aa12.92□□□□□ -0.34
DDX39A-210ENST00000589675 IQCF3P0C7M6 154 aa12.92□□□□□ -0.34
DDX39A-210ENST00000589675 POLR2MP0CAP2 368 aa12.92□□□□□ -0.34
DDX39A-210ENST00000589675 PGM5Q15124 567 aa12.92□□□□□ -0.34
DDX39A-210ENST00000589675 RETREG2Q8NC44 543 aa12.92□□□□□ -0.34
DDX39A-210ENST00000589675 CAGE1Q8TC20 777 aa12.92□□□□□ -0.34
DDX39A-210ENST00000589675 KATNAL1Q9BW62 490 aa12.92□□□□□ -0.34
DDX39A-210ENST00000589675 SPZ1Q9BXG8 430 aa12.92□□□□□ -0.34
DDX39A-210ENST00000589675 MRVI1Q9Y6F6 885 aa12.92□□□□□ -0.34
DDX39A-210ENST00000589675 FRMPD4Q14CM0 1322 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 HAS3O00219 553 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 STAM2O75886 525 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 DDAH1O94760 285 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 PARNO95453 639 aaKnown RBP12.91□□□□□ -0.34
DDX39A-210ENST00000589675 F2P00734 622 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 ACTN1P12814 892 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 HOXA13P31271 388 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-210ENST00000589675 KIF5BP33176 963 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 RBL2Q08999 1139 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 PTGISQ16647 500 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 CELF3Q5SZQ8 465 aaKnown RBP12.91□□□□□ -0.34
DDX39A-210ENST00000589675 MYSM1Q5VVJ2 828 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 CHST3Q7LGC8 479 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 DHX37Q8IY37 1157 aaKnown RBP12.91□□□□□ -0.34
DDX39A-210ENST00000589675 CCDC155Q8N6L0 562 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 AFAP1L1Q8TED9 768 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 TMEM87BQ96K49 555 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 CTAGE1Q96RT6 745 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 LZTS2Q9BRK4 669 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 LSG1Q9H089 658 aaKnown RBP12.91□□□□□ -0.34
DDX39A-210ENST00000589675 LY9Q9HBG7 655 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 NOD1Q9Y239 953 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 PCDHA11Q9Y5I1 949 aa12.91□□□□□ -0.34
DDX39A-210ENST00000589675 MYCLP12524 364 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-210ENST00000589675 CCND2P30279 289 aa12.9□□□□□ -0.34
DDX39A-210ENST00000589675 MCM5P33992 734 aa12.9□□□□□ -0.34
DDX39A-210ENST00000589675 LIFRP42702 1097 aa12.9□□□□□ -0.34
DDX39A-210ENST00000589675 GNAQP50148 359 aa12.9□□□□□ -0.34
DDX39A-210ENST00000589675 NECTIN1Q15223 517 aa12.9□□□□□ -0.34
DDX39A-210ENST00000589675 GDF6Q6KF10 455 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-210ENST00000589675 CASC1Q6TDU7 716 aa12.9□□□□□ -0.34
DDX39A-210ENST00000589675 ZNF654Q8IZM8 581 aa12.9□□□□□ -0.34
DDX39A-210ENST00000589675 CTCFLQ8NI51 663 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-210ENST00000589675 PHOSPHO2Q8TCD6 241 aa12.9□□□□□ -0.34
DDX39A-210ENST00000589675 GAS2L1Q99501 681 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-210ENST00000589675 ESYT1Q9BSJ8 1104 aa12.9□□□□□ -0.34
DDX39A-210ENST00000589675 SLC28A3Q9HAS3 691 aa12.9□□□□□ -0.34
DDX39A-210ENST00000589675 GTF2IRD1Q9UHL9 959 aa12.9□□□□□ -0.34
DDX39A-210ENST00000589675 MUC3AQ02505 3323 aa12.89□□□□□ -0.35
DDX39A-210ENST00000589675 PIK3CDO00329 1044 aa12.89□□□□□ -0.35
DDX39A-210ENST00000589675 PRC1O43663 620 aa12.89□□□□□ -0.35
DDX39A-210ENST00000589675 BAIAP3O94812 1187 aa12.89□□□□□ -0.35
DDX39A-210ENST00000589675 ATP2A2P16615 1042 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms