RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 VTA1Q9NP79 307 aa24.29■■□□□ 1.48
R3HDM4-204ENST00000589428 DDX20Q9UHI6 824 aaKnown RBP24.29■■□□□ 1.48
R3HDM4-204ENST00000589428 AKR1A1P14550 325 aa24.28■■□□□ 1.48
R3HDM4-204ENST00000589428 GNA11P29992 359 aa24.28■■□□□ 1.48
R3HDM4-204ENST00000589428 SOX10P56693 466 aa24.28■■□□□ 1.48
R3HDM4-204ENST00000589428 SAFBQ15424 915 aaKnown RBP eCLIP24.28■■□□□ 1.48
R3HDM4-204ENST00000589428 FBXO16Q8IX29 292 aaPredicted RBP24.28■■□□□ 1.48
R3HDM4-204ENST00000589428 U2AF1L4Q8WU68 220 aaKnown RBP24.28■■□□□ 1.48
R3HDM4-204ENST00000589428 ZMYND12Q9H0C1 365 aa24.28■■□□□ 1.48
R3HDM4-204ENST00000589428 BTBD18B2RXH4 712 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 ADAMTS3O15072 1205 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 CHAMP1Q96JM3 812 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 PDCD2LQ9BRP1 358 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 KATNBL1Q9H079 304 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 ZSCAN16Q9H4T2 348 aaPredicted RBP24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 NR3C2P08235 984 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 U2AF2P26368 475 aaKnown RBP eCLIP24.27■■□□□ 1.481e-6■□□□□ 8.1
R3HDM4-204ENST00000589428 KRT2P35908 639 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 NR5A1Q13285 461 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 STXBP2Q15833 593 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 BICD2Q8TD16 824 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 EHMT1Q9H9B1 1298 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 FAM184BQ9ULE4 1060 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 BRCA2P51587 3418 aa24.27■■□□□ 1.48
R3HDM4-204ENST00000589428 KIAA0100Q14667 2235 aaKnown RBP24.27■■□□□ 1.47
R3HDM4-204ENST00000589428 FRMPD4Q14CM0 1322 aa24.26■■□□□ 1.47
R3HDM4-204ENST00000589428 POTEFA5A3E0 1075 aa24.26■■□□□ 1.47
R3HDM4-204ENST00000589428 GJA8P48165 433 aa24.26■■□□□ 1.47
R3HDM4-204ENST00000589428 PGM5Q15124 567 aa24.26■■□□□ 1.47
R3HDM4-204ENST00000589428 FOXD4L6Q3SYB3 417 aaPredicted RBP24.26■■□□□ 1.47
R3HDM4-204ENST00000589428 FAM173BQ6P4H8 233 aa24.26■■□□□ 1.47
R3HDM4-204ENST00000589428 FOXD4L3Q6VB84 417 aaPredicted RBP24.26■■□□□ 1.47
R3HDM4-204ENST00000589428 DAGLBQ8NCG7 672 aa24.26■■□□□ 1.47
R3HDM4-204ENST00000589428 FOXP1Q9H334 677 aaPredicted RBP24.26■■□□□ 1.47
R3HDM4-204ENST00000589428 PCDHA4Q9UN74 947 aa24.26■■□□□ 1.47
R3HDM4-204ENST00000589428 MYH15Q9Y2K3 1946 aa24.26■■□□□ 1.47
R3HDM4-204ENST00000589428 SGPL1O95470 568 aa24.25■■□□□ 1.47
R3HDM4-204ENST00000589428 MYCLP12524 364 aaPredicted RBP24.25■■□□□ 1.47
R3HDM4-204ENST00000589428 CCND2P30279 289 aa24.25■■□□□ 1.47
R3HDM4-204ENST00000589428 AP3B2Q13367 1082 aa24.25■■□□□ 1.47
R3HDM4-204ENST00000589428 CCDC144BQ3MJ40 725 aa24.25■■□□□ 1.47
R3HDM4-204ENST00000589428 REXO1Q8N1G1 1221 aaKnown RBP24.25■■□□□ 1.47
R3HDM4-204ENST00000589428 BRMS1Q9HCU9 246 aa24.25■■□□□ 1.47
R3HDM4-204ENST00000589428 FOSP01100 380 aaPredicted RBP24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 RARBP10826 455 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 GNL2Q13823 731 aaKnown RBP24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 ANO1Q5XXA6 986 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 GALNT17Q6IS24 598 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 BRAPQ7Z569 592 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 NOSTRINQ8IVI9 506 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 BLIDQ8IZY5 108 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 TNFRSF25Q93038 417 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 PCDHA6Q9UN73 950 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 PCDHA8Q9Y5H6 950 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 ATP6V1DQ9Y5K8 247 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 CAPN15O75808 1086 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 CAPN2P17655 700 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 MCTP2Q6DN12 878 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 IL31RAQ8NI17 732 aa24.24■■□□□ 1.47
R3HDM4-204ENST00000589428 M0R2N6 131 aa24.23■■□□□ 1.47
R3HDM4-204ENST00000589428 EIF3JO75822 258 aaKnown RBP24.23■■□□□ 1.47
R3HDM4-204ENST00000589428 TFRCP02786 760 aaKnown RBP24.23■■□□□ 1.47
R3HDM4-204ENST00000589428 LHX8Q68G74 356 aa24.23■■□□□ 1.47
R3HDM4-204ENST00000589428 CLEC17AQ6ZS10 378 aa24.23■■□□□ 1.47
R3HDM4-204ENST00000589428 ANO3Q9BYT9 981 aa24.23■■□□□ 1.47
R3HDM4-204ENST00000589428 FRMPD3Q5JV73 1810 aa24.22■■□□□ 1.47
R3HDM4-204ENST00000589428 ADCYAP1R1P41586 468 aa24.22■■□□□ 1.47
R3HDM4-204ENST00000589428 CLK2P49760 499 aaKnown RBP24.22■■□□□ 1.47
R3HDM4-204ENST00000589428 JAKMIP3Q5VZ66 844 aa24.22■■□□□ 1.47
R3HDM4-204ENST00000589428 TAPT1Q6NXT6 567 aa24.22■■□□□ 1.47
R3HDM4-204ENST00000589428 VSIG10LQ86VR7 867 aa24.22■■□□□ 1.47
R3HDM4-204ENST00000589428 RASGRP4Q8TDF6 673 aa24.22■■□□□ 1.47
R3HDM4-204ENST00000589428 SCFD2Q8WU76 684 aa24.22■■□□□ 1.47
R3HDM4-204ENST00000589428 CRISPLD2Q9H0B8 497 aa24.22■■□□□ 1.47
R3HDM4-204ENST00000589428 PDGFCQ9NRA1 345 aa24.22■■□□□ 1.47
R3HDM4-204ENST00000589428 BAG4O95429 457 aaKnown RBP24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 TNFAIP2Q03169 654 aa24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 SEPT14Q6ZU15 432 aa24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 PGBD1Q96JS3 809 aa24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 TMEM260Q9NX78 707 aa24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 OGDHLQ9ULD0 1010 aa24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 TCHHQ07283 1943 aa24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 FAM205CA6NFA0 338 aa24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 STAM2O75886 525 aa24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 EN2P19622 333 aaPredicted RBP24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 DNM1Q05193 864 aaKnown RBP24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 EARS2Q5JPH6 523 aaKnown RBP24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 PCNX4Q63HM2 1172 aa24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 IQSEC1Q6DN90 963 aa24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 XRRA1Q6P2D8 792 aa24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 LENG1Q96BZ8 264 aaPredicted RBP24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 XPNPEP3Q9NQH7 507 aa24.21■■□□□ 1.47
R3HDM4-204ENST00000589428 DUSP11O75319 330 aaKnown RBP24.2■■□□□ 1.46
R3HDM4-204ENST00000589428 TTLL4Q14679 1199 aa24.2■■□□□ 1.46
R3HDM4-204ENST00000589428 MYSM1Q5VVJ2 828 aa24.2■■□□□ 1.46
R3HDM4-204ENST00000589428 WDR11Q9BZH6 1224 aa24.2■■□□□ 1.46
R3HDM4-204ENST00000589428 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.19■■□□□ 1.46
R3HDM4-204ENST00000589428 RBM47A0AV96 593 aaKnown RBP24.19■■□□□ 1.46
R3HDM4-204ENST00000589428 GNPTABQ3T906 1256 aa24.19■■□□□ 1.46
R3HDM4-204ENST00000589428 ADCY6O43306 1168 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms