RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 BMP1P13497 986 aa12.9□□□□□ -0.34
MRPL54-202ENST00000589174 GSPT1P15170 499 aaKnown RBP12.9□□□□□ -0.34
MRPL54-202ENST00000589174 KCNQ1P51787 676 aa12.9□□□□□ -0.34
MRPL54-202ENST00000589174 DEFB103AP81534 67 aa12.9□□□□□ -0.34
MRPL54-202ENST00000589174 ZNF200P98182 395 aaPredicted RBP12.9□□□□□ -0.34
MRPL54-202ENST00000589174 GHRHRQ02643 423 aa12.9□□□□□ -0.34
MRPL54-202ENST00000589174 SESTD1Q86VW0 696 aa12.9□□□□□ -0.34
MRPL54-202ENST00000589174 RPUSD2Q8IZ73 545 aaKnown RBP12.9□□□□□ -0.34
MRPL54-202ENST00000589174 ADAMTS19Q8TE59 1207 aa12.9□□□□□ -0.34
MRPL54-202ENST00000589174 ESR2Q92731 530 aa12.9□□□□□ -0.34
MRPL54-202ENST00000589174 ZSCAN10Q96SZ4 725 aaPredicted RBP12.9□□□□□ -0.34
MRPL54-202ENST00000589174 DDX41Q9UJV9 622 aaKnown RBP12.9□□□□□ -0.34
MRPL54-202ENST00000589174 BRWD1Q9NSI6 2320 aa12.9□□□□□ -0.34
MRPL54-202ENST00000589174 NCOR1O75376 2440 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 ZNF213O14771 459 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 CYTH3O43739 400 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 PFKMP08237 780 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 SUPT20HL2P0C7V6 817 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 HOXD8P13378 290 aaPredicted RBP12.89□□□□□ -0.35
MRPL54-202ENST00000589174 EIF2AK2P19525 551 aaKnown RBP12.89□□□□□ -0.35
MRPL54-202ENST00000589174 POU3F3P20264 500 aaPredicted RBP12.89□□□□□ -0.35
MRPL54-202ENST00000589174 HSD17B4P51659 736 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 SP2Q02086 613 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 RBL2Q08999 1139 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 MKRN4PQ13434 485 aaPredicted RBP12.89□□□□□ -0.35
MRPL54-202ENST00000589174 CHST3Q7LGC8 479 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 HERC6Q8IVU3 1022 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 SYMPKQ92797 1274 aaKnown RBP12.89□□□□□ -0.35
MRPL54-202ENST00000589174 DSCC1Q9BVC3 393 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 MTIF3Q9H2K0 278 aaKnown RBP12.89□□□□□ -0.35
MRPL54-202ENST00000589174 VAT1LQ9HCJ6 419 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 PXMP2Q9NR77 195 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 HDAC6Q9UBN7 1215 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 MAD2L2Q9UI95 211 aa12.89□□□□□ -0.35
MRPL54-202ENST00000589174 ABCB11O95342 1321 aa12.88□□□□□ -0.35
MRPL54-202ENST00000589174 SORBS3O60504 671 aa12.88□□□□□ -0.35
MRPL54-202ENST00000589174 ZNF286BP0CG31 522 aa12.88□□□□□ -0.35
MRPL54-202ENST00000589174 CHMP4BP1P59074 171 aa12.88□□□□□ -0.35
MRPL54-202ENST00000589174 WDR5P61964 334 aaKnown RBP12.88□□□□□ -0.35
MRPL54-202ENST00000589174 PTPN11Q06124 597 aaPredicted RBP12.88□□□□□ -0.35
MRPL54-202ENST00000589174 PTGISQ16647 500 aa12.88□□□□□ -0.35
MRPL54-202ENST00000589174 TMEM67Q5HYA8 995 aa12.88□□□□□ -0.35
MRPL54-202ENST00000589174 MICALL1Q8N3F8 863 aa12.88□□□□□ -0.35
MRPL54-202ENST00000589174 RMDN3Q96TC7 470 aa12.88□□□□□ -0.35
MRPL54-202ENST00000589174 RNF41Q9H4P4 317 aaPredicted RBP12.88□□□□□ -0.35
MRPL54-202ENST00000589174 GTF2IRD1Q9UHL9 959 aa12.88□□□□□ -0.35
MRPL54-202ENST00000589174 PALM3A6NDB9 673 aaPredicted RBP12.87□□□□□ -0.35
MRPL54-202ENST00000589174 F2P00734 622 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 GH1P01241 217 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 CXCL10P02778 98 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 NR3C2P08235 984 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 MRPS5P82675 430 aaKnown RBP12.87□□□□□ -0.35
MRPL54-202ENST00000589174 PTH1RQ03431 593 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 GRB10Q13322 594 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 HSDL1Q3SXM5 330 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 ASPRV1Q53RT3 343 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 STOX1Q6ZVD7 989 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 FBXO11Q86XK2 927 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 NSUN6Q8TEA1 469 aaKnown RBP12.87□□□□□ -0.35
MRPL54-202ENST00000589174 KHSRPQ92945 711 aaKnown RBP eCLIP12.87□□□□□ -0.35
MRPL54-202ENST00000589174 EMID1Q96A84 441 aaPredicted RBP12.87□□□□□ -0.35
MRPL54-202ENST00000589174 SLC9A7Q96T83 725 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 PDCD2LQ9BRP1 358 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 KAT14Q9H8E8 782 aa12.87□□□□□ -0.35
MRPL54-202ENST00000589174 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
MRPL54-202ENST00000589174 KPNA6O60684 536 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 CFBP00751 764 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 PARP1P09874 1014 aaKnown RBP12.86□□□□□ -0.35
MRPL54-202ENST00000589174 CKBP12277 381 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 COL9A1P20849 921 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 HOXA13P31271 388 aaPredicted RBP12.86□□□□□ -0.35
MRPL54-202ENST00000589174 RFC2P35250 354 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 PSEN2P49810 448 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 SEMA3FQ13275 785 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 STXBP2Q15833 593 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 ARNTL2Q8WYA1 636 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 UHRF1Q96T88 793 aaPredicted RBP12.86□□□□□ -0.35
MRPL54-202ENST00000589174 C16orf70Q9BSU1 422 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 ALG1Q9BT22 464 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 ZBTB47Q9UFB7 747 aaPredicted RBP12.86□□□□□ -0.35
MRPL54-202ENST00000589174 PNMA2Q9UL42 364 aa12.86□□□□□ -0.35
MRPL54-202ENST00000589174 NLRC5Q86WI3 1866 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 CYP21A2P08686 494 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 HOXC8P31273 242 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 ANTXR2P58335 489 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 PGM5Q15124 567 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 ZNF618Q5T7W0 954 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 MYSM1Q5VVJ2 828 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 LRRC8DQ7L1W4 858 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 PHOSPHO2Q8TCD6 241 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 AFAP1L1Q8TED9 768 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 IWS1Q96ST2 819 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 FTOQ9C0B1 505 aaKnown RBP eCLIP12.85□□□□□ -0.35
MRPL54-202ENST00000589174 DIAPH3Q9NSV4 1193 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 COL4A6Q14031 1691 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 RAD50Q92878 1312 aa12.85□□□□□ -0.35
MRPL54-202ENST00000589174 KLRF2D3W0D1 207 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 TLL1O43897 1013 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 EIF3JO75822 258 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms