RNA–Protein interactions for RNA: ENST00000588494.5

NEDD4L-222, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4L, Length 505 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-222ENST00000588494 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 DPF3Q92784 378 aa4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 NINJ1Q92982 152 aa4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 MFSD3Q96ES6 412 aa4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 ZFYVE21Q9BQ24 234 aa4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 JAM3Q9BX67 310 aa4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 RNF32Q9H0A6 362 aa4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 PLAAQ9Y263 795 aa4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 COA3Q9Y2R0 106 aaPredicted RBP4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 TNPO3Q9Y5L0 923 aaKnown RBP4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 NPFFR2Q9Y5X5 522 aa4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 SBNO2Q9Y2G9 1366 aa4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 SYNJ2O15056 1496 aa4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 BAZ1AQ9NRL2 1556 aaPredicted RBP4.36□□□□□ -1.71
NEDD4L-222ENST00000588494 ANKRD62A6NC57 917 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 BIN1O00499 593 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 PPP1R11O60927 126 aaPredicted RBP4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 MYCLP1P12525 358 aaPredicted RBP4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 NAT1P18440 290 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 GRK2P25098 689 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 GRK3P35626 688 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 PDE6BP35913 854 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 DNM2P50570 870 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 NEK4P51957 841 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 ST5P78524 1137 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 PAK1Q13153 545 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 KCNMB1Q16558 191 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 ADGRF1Q5T601 910 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 RNF187Q5TA31 235 aaPredicted RBP4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 ASIC4Q96FT7 647 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 SCLYQ96I15 445 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 TMX1Q9H3N1 280 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 IPPKQ9H8X2 491 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 RXFP1Q9HBX9 757 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 PDLIM7Q9NR12 457 aa4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 DBR1Q9UK59 544 aaKnown RBP4.35□□□□□ -1.71
NEDD4L-222ENST00000588494 TCRBV16S1A1N1A0A5B0 115 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 NOTOA8MTQ0 251 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 NUDT19A8MXV4 375 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 FAM47E-STBD1D6RA91 191 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 DNAJC8O75937 253 aaPredicted RBP4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 EFEMP2O95967 443 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 NTRK1P04629 796 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 GNAT1P11488 350 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 CNGA1P29973 690 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 IGFALSP35858 605 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 FLT3P36888 993 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 CORO7P57737 925 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 ZNF460Q14592 562 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 NR0B2Q15466 257 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 TESK1Q15569 626 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 TRIM61Q5EBN2 209 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 CT47A1Q5JQC4 288 aaPredicted RBP4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 MPZL3Q6UWV2 235 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 FILIP1Q7Z7B0 1213 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 NLRX1Q86UT6 975 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 NLRP10Q86W26 655 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 GSTCDQ8NEC7 633 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 FLAD1Q8NFF5 587 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 SP110Q9HB58 689 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 TRIM39Q9HCM9 518 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 CATSPERZQ9NTU4 200 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 MAGEC2Q9UBF1 373 aaPredicted RBP4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 FBLN5Q9UBX5 448 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 ACSL6Q9UKU0 697 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 COQ6Q9Y2Z9 468 aa4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 THOC2Q8NI27 1593 aaKnown RBP4.34□□□□□ -1.71
NEDD4L-222ENST00000588494 KPNA6O60684 536 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 RFPL3O75679 317 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 JMJD7P0C870 316 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 PYGMP11217 842 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 COL6A2P12110 1019 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 PNLIPP16233 465 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 KRT15P19012 456 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 NCLP19338 710 aaKnown RBP4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 SNX17Q15036 470 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 RAB3GAP1Q15042 981 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 FAM47CQ5HY64 1035 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 PIK3R6Q5UE93 754 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 EP400NLQ6ZTU2 488 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 UBE2R2Q712K3 238 aaPredicted RBP4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 ATG4DQ86TL0 474 aaPredicted RBP4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 LRRTM3Q86VH5 581 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 ZSWIM9Q86XI8 627 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 CISD2Q8N5K1 135 aaKnown RBP4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 UBR7Q8N806 425 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 PLEKHO2Q8TD55 490 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 LEO1Q8WVC0 666 aaPredicted RBP4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 FBXW5Q969U6 566 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 MTA3Q9BTC8 594 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 SAMD15Q9P1V8 674 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 ADGRE2Q9UHX3 823 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 SIT1Q9Y3P8 196 aa4.33□□□□□ -1.72
NEDD4L-222ENST00000588494 ARAP1Q96P48 1450 aa4.32□□□□□ -1.72
NEDD4L-222ENST00000588494 ZC3H12DA2A288 527 aaKnown RBP4.32□□□□□ -1.72
NEDD4L-222ENST00000588494 CCDC66A2RUB6 948 aa4.32□□□□□ -1.72
NEDD4L-222ENST00000588494 B4E1Z4 1266 aa4.32□□□□□ -1.72
NEDD4L-222ENST00000588494 F8W031 263 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms