RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-210ENST00000587235 DDX41Q9UJV9 622 aaKnown RBP29.32■■■□□ 2.28
TCF3-210ENST00000587235 CDC45O75419 566 aa29.31■■■□□ 2.28
TCF3-210ENST00000587235 FOSL2P15408 326 aa29.31■■■□□ 2.28
TCF3-210ENST00000587235 ANTXR2P58335 489 aa29.31■■■□□ 2.28
TCF3-210ENST00000587235 CHMP4BP1P59074 171 aa29.31■■■□□ 2.28
TCF3-210ENST00000587235 PTPN11Q06124 597 aaPredicted RBP29.31■■■□□ 2.28
TCF3-210ENST00000587235 NECTIN1Q15223 517 aa29.31■■■□□ 2.28
TCF3-210ENST00000587235 MB21D2Q8IYB1 491 aaPredicted RBP29.31■■■□□ 2.28
TCF3-210ENST00000587235 IGDCC4Q8TDY8 1250 aa29.31■■■□□ 2.28
TCF3-210ENST00000587235 CYTH3O43739 400 aa29.3■■■□□ 2.28
TCF3-210ENST00000587235 MMP3P08254 477 aa29.3■■■□□ 2.28
TCF3-210ENST00000587235 HOXA13P31271 388 aaPredicted RBP29.3■■■□□ 2.28
TCF3-210ENST00000587235 TRAF1Q13077 416 aa29.3■■■□□ 2.28
TCF3-210ENST00000587235 RNF20Q5VTR2 975 aa29.3■■■□□ 2.28
TCF3-210ENST00000587235 ERICH6BQ5W0A0 696 aa29.3■■■□□ 2.28
TCF3-210ENST00000587235 CATIPQ7Z7H3 387 aa29.3■■■□□ 2.28
TCF3-210ENST00000587235 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.3■■■□□ 2.281e-6■■■■■ 27.4
TCF3-210ENST00000587235 SAMD3Q8N6K7 520 aa29.3■■■□□ 2.28
TCF3-210ENST00000587235 VWCEQ96DN2 955 aa29.3■■■□□ 2.28
TCF3-210ENST00000587235 MYCLP12524 364 aaPredicted RBP29.29■■■□□ 2.28
TCF3-210ENST00000587235 PDCD2LQ9BRP1 358 aa29.29■■■□□ 2.28
TCF3-210ENST00000587235 MRVI1Q9Y6F6 885 aa29.29■■■□□ 2.28
TCF3-210ENST00000587235 KIAA1217Q5T5P2 1943 aa29.28■■■□□ 2.28
TCF3-210ENST00000587235 PNMA6FA0A0J9YX94 578 aa29.28■■■□□ 2.28
TCF3-210ENST00000587235 SLC27A2O14975 620 aa29.28■■■□□ 2.28
TCF3-210ENST00000587235 CASTP20810 708 aaKnown RBP29.28■■■□□ 2.28
TCF3-210ENST00000587235 MCM5P33992 734 aa29.28■■■□□ 2.28
TCF3-210ENST00000587235 CREB3L3Q68CJ9 461 aa29.28■■■□□ 2.28
TCF3-210ENST00000587235 TMTC2Q8N394 836 aa29.28■■■□□ 2.28
TCF3-210ENST00000587235 CDH23Q9H251 3354 aa29.27■■■□□ 2.28
TCF3-210ENST00000587235 GCOM1H8Y6P7 765 aaPredicted RBP29.27■■■□□ 2.28
TCF3-210ENST00000587235 POLR2MP0CAP2 368 aa29.27■■■□□ 2.28
TCF3-210ENST00000587235 MSRAQ9UJ68 235 aa29.27■■■□□ 2.28
TCF3-210ENST00000587235 LAMC2Q13753 1193 aa29.26■■■□□ 2.27
TCF3-210ENST00000587235 DGKDQ16760 1214 aa29.26■■■□□ 2.27
TCF3-210ENST00000587235 DEFB128Q7Z7B8 93 aa29.26■■■□□ 2.27
TCF3-210ENST00000587235 VSIG10LQ86VR7 867 aa29.26■■■□□ 2.27
TCF3-210ENST00000587235 RETREG2Q8NC44 543 aa29.26■■■□□ 2.27
TCF3-210ENST00000587235 KAT2BQ92831 832 aa29.26■■■□□ 2.27
TCF3-210ENST00000587235 EMID1Q96A84 441 aaPredicted RBP29.26■■■□□ 2.27
TCF3-210ENST00000587235 TMEM87BQ96K49 555 aa29.26■■■□□ 2.27
TCF3-210ENST00000587235 MAP3K14Q99558 947 aa29.26■■■□□ 2.27
TCF3-210ENST00000587235 NOD1Q9Y239 953 aa29.26■■■□□ 2.27
TCF3-210ENST00000587235 SLC4A7Q9Y6M7 1214 aa29.26■■■□□ 2.27
TCF3-210ENST00000587235 MYO9BQ13459 2157 aa29.26■■■□□ 2.27
TCF3-210ENST00000587235 RGS20O76081 388 aa29.25■■■□□ 2.27
TCF3-210ENST00000587235 PGM5Q15124 567 aa29.25■■■□□ 2.27
TCF3-210ENST00000587235 RAB30Q15771 203 aa29.25■■■□□ 2.27
TCF3-210ENST00000587235 FCHSD1Q86WN1 690 aa29.25■■■□□ 2.27
TCF3-210ENST00000587235 DHX37Q8IY37 1157 aaKnown RBP29.25■■■□□ 2.27
TCF3-210ENST00000587235 PIBF1Q8WXW3 757 aa29.25■■■□□ 2.27
TCF3-210ENST00000587235 ZBBXA8MT70 800 aa29.24■■■□□ 2.27
TCF3-210ENST00000587235 PFKMP08237 780 aa29.24■■■□□ 2.27
TCF3-210ENST00000587235 COL9A3Q14050 684 aaPredicted RBP29.24■■■□□ 2.27
TCF3-210ENST00000587235 PTGISQ16647 500 aa29.24■■■□□ 2.27
TCF3-210ENST00000587235 IL31RAQ8NI17 732 aa29.24■■■□□ 2.27
TCF3-210ENST00000587235 LY9Q9HBG7 655 aa29.24■■■□□ 2.27
TCF3-210ENST00000587235 PITPNM1O00562 1244 aa29.23■■■□□ 2.27
TCF3-210ENST00000587235 IQCF3P0C7M6 154 aa29.23■■■□□ 2.27
TCF3-210ENST00000587235 BFSP2Q13515 415 aa29.23■■■□□ 2.27
TCF3-210ENST00000587235 GDF6Q6KF10 455 aaPredicted RBP29.23■■■□□ 2.27
TCF3-210ENST00000587235 KCNV1Q6PIU1 500 aa29.23■■■□□ 2.27
TCF3-210ENST00000587235 SESTD1Q86VW0 696 aa29.23■■■□□ 2.27
TCF3-210ENST00000587235 ZFP91Q96JP5 570 aaPredicted RBP29.23■■■□□ 2.27
TCF3-210ENST00000587235 MYL10Q9BUA6 226 aa29.23■■■□□ 2.27
TCF3-210ENST00000587235 NKX2-4Q9H2Z4 354 aa29.23■■■□□ 2.27
TCF3-210ENST00000587235 PRC1O43663 620 aa29.22■■■□□ 2.27
TCF3-210ENST00000587235 RFC2P35250 354 aa29.22■■■□□ 2.27
TCF3-210ENST00000587235 ZNF654Q8IZM8 581 aa29.22■■■□□ 2.27
TCF3-210ENST00000587235 PPTC7Q8NI37 304 aa29.22■■■□□ 2.27
TCF3-210ENST00000587235 CTCFLQ8NI51 663 aaPredicted RBP29.22■■■□□ 2.27
TCF3-210ENST00000587235 YBX2Q9Y2T7 364 aaKnown RBP29.22■■■□□ 2.27
TCF3-210ENST00000587235 UNC80Q8N2C7 3258 aa29.21■■■□□ 2.27
TCF3-210ENST00000587235 DDAH1O94760 285 aa29.21■■■□□ 2.27
TCF3-210ENST00000587235 CENPBP07199 599 aaPredicted RBP29.21■■■□□ 2.27
TCF3-210ENST00000587235 CCND2P30279 289 aa29.21■■■□□ 2.27
TCF3-210ENST00000587235 LIFRP42702 1097 aa29.21■■■□□ 2.27
TCF3-210ENST00000587235 RABGGTBP53611 331 aa29.21■■■□□ 2.27
TCF3-210ENST00000587235 TSGA10IPQ3SY00 556 aa29.21■■■□□ 2.27
TCF3-210ENST00000587235 MYSM1Q5VVJ2 828 aa29.21■■■□□ 2.27
TCF3-210ENST00000587235 MYH7BA7E2Y1 1941 aa29.21■■■□□ 2.27
TCF3-210ENST00000587235 SCN5AQ14524 2016 aa29.2■■■□□ 2.27
TCF3-210ENST00000587235 SORBS3O60504 671 aa29.2■■■□□ 2.26
TCF3-210ENST00000587235 KIF5BP33176 963 aa29.2■■■□□ 2.26
TCF3-210ENST00000587235 PSEN2P49810 448 aa29.2■■■□□ 2.26
TCF3-210ENST00000587235 CELF3Q5SZQ8 465 aaKnown RBP29.2■■■□□ 2.26
TCF3-210ENST00000587235 CTAGE1Q96RT6 745 aa29.2■■■□□ 2.26
TCF3-210ENST00000587235 ALG1Q9BT22 464 aa29.2■■■□□ 2.26
TCF3-210ENST00000587235 SPZ1Q9BXG8 430 aa29.2■■■□□ 2.26
TCF3-210ENST00000587235 PRDM12Q9H4Q4 367 aa29.2■■■□□ 2.26
TCF3-210ENST00000587235 SLC28A3Q9HAS3 691 aa29.2■■■□□ 2.26
TCF3-210ENST00000587235 HDAC6Q9UBN7 1215 aa29.2■■■□□ 2.26
TCF3-210ENST00000587235 GGPS1O95749 300 aa29.19■■■□□ 2.26
TCF3-210ENST00000587235 TGFB3P10600 412 aa29.19■■■□□ 2.26
TCF3-210ENST00000587235 ACTN1P12814 892 aa29.19■■■□□ 2.26
TCF3-210ENST00000587235 ATP2A2P16615 1042 aaKnown RBP29.19■■■□□ 2.26
TCF3-210ENST00000587235 SMARCA1P28370 1054 aa29.19■■■□□ 2.26
TCF3-210ENST00000587235 SP2Q02086 613 aa29.19■■■□□ 2.26
TCF3-210ENST00000587235 KRT32Q14532 448 aa29.19■■■□□ 2.26
TCF3-210ENST00000587235 NFXL1Q6ZNB6 911 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms