RNA–Protein interactions for RNA: ENST00000587204.1

TUBB6-206, Transcript of tubulin beta 6 class V, humanhuman

TSL 2

Gene TUBB6, Length 408 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-206ENST00000587204 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.48■□□□□ 0.23
TUBB6-206ENST00000587204 HERVK_113Q902F9 699 aa16.48■□□□□ 0.23
TUBB6-206ENST00000587204 MYL10Q9BUA6 226 aa16.48■□□□□ 0.23
TUBB6-206ENST00000587204 SEZ6LQ9BYH1 1024 aa16.48■□□□□ 0.23
TUBB6-206ENST00000587204 ZNF576Q9H609 170 aa16.48■□□□□ 0.23
TUBB6-206ENST00000587204 PXMP2Q9NR77 195 aa16.48■□□□□ 0.23
TUBB6-206ENST00000587204 KIAA1217Q5T5P2 1943 aa16.47■□□□□ 0.23
TUBB6-206ENST00000587204 CUL9Q8IWT3 2517 aa16.47■□□□□ 0.23
TUBB6-206ENST00000587204 SCN5AQ14524 2016 aa16.47■□□□□ 0.23
TUBB6-206ENST00000587204 ZBBXA8MT70 800 aa16.47■□□□□ 0.23
TUBB6-206ENST00000587204 MMP3P08254 477 aa16.47■□□□□ 0.23
TUBB6-206ENST00000587204 HSD17B4P51659 736 aa16.47■□□□□ 0.23
TUBB6-206ENST00000587204 FCHSD1Q86WN1 690 aa16.47■□□□□ 0.23
TUBB6-206ENST00000587204 IL31RAQ8NI17 732 aa16.47■□□□□ 0.23
TUBB6-206ENST00000587204 MTMR8Q96EF0 704 aa16.47■□□□□ 0.23
TUBB6-206ENST00000587204 IWS1Q96ST2 819 aa16.47■□□□□ 0.23
TUBB6-206ENST00000587204 MRVI1Q9Y6F6 885 aa16.47■□□□□ 0.23
TUBB6-206ENST00000587204 CYTH3O43739 400 aa16.46■□□□□ 0.23
TUBB6-206ENST00000587204 KPNA6O60684 536 aa16.46■□□□□ 0.23
TUBB6-206ENST00000587204 SUPT20HL2P0C7V6 817 aa16.46■□□□□ 0.23
TUBB6-206ENST00000587204 RABGGTBP53611 331 aa16.46■□□□□ 0.23
TUBB6-206ENST00000587204 SART3Q15020 963 aaKnown RBP16.46■□□□□ 0.23
TUBB6-206ENST00000587204 CATIPQ7Z7H3 387 aa16.46■□□□□ 0.23
TUBB6-206ENST00000587204 MB21D2Q8IYB1 491 aaPredicted RBP16.46■□□□□ 0.23
TUBB6-206ENST00000587204 MAP4K1Q92918 833 aa16.46■□□□□ 0.23
TUBB6-206ENST00000587204 VWCEQ96DN2 955 aa16.46■□□□□ 0.23
TUBB6-206ENST00000587204 NKX2-4Q9H2Z4 354 aa16.46■□□□□ 0.23
TUBB6-206ENST00000587204 DDX41Q9UJV9 622 aaKnown RBP16.46■□□□□ 0.23
TUBB6-206ENST00000587204 NOD1Q9Y239 953 aa16.46■□□□□ 0.23
TUBB6-206ENST00000587204 A0A0C4DFX4 3053 aa16.46■□□□□ 0.23
TUBB6-206ENST00000587204 TMEM265A0A087WTH1 108 aa16.45■□□□□ 0.22
TUBB6-206ENST00000587204 EIF3JO75822 258 aaKnown RBP16.45■□□□□ 0.22
TUBB6-206ENST00000587204 ZNF286BP0CG31 522 aa16.45■□□□□ 0.22
TUBB6-206ENST00000587204 TROAPQ12815 778 aa16.45■□□□□ 0.22
TUBB6-206ENST00000587204 COL9A3Q14050 684 aaPredicted RBP16.45■□□□□ 0.22
TUBB6-206ENST00000587204 NFRKBQ6P4R8 1299 aa16.45■□□□□ 0.22
TUBB6-206ENST00000587204 RAB11FIP4Q86YS3 637 aa16.45■□□□□ 0.22
TUBB6-206ENST00000587204 RPUSD2Q8IZ73 545 aaKnown RBP16.45■□□□□ 0.22
TUBB6-206ENST00000587204 SP7Q8TDD2 431 aaPredicted RBP16.45■□□□□ 0.22
TUBB6-206ENST00000587204 KAT2BQ92831 832 aa16.45■□□□□ 0.22
TUBB6-206ENST00000587204 PDCD2LQ9BRP1 358 aa16.45■□□□□ 0.22
TUBB6-206ENST00000587204 ALG1Q9BT22 464 aa16.45■□□□□ 0.22
TUBB6-206ENST00000587204 MTIF3Q9H2K0 278 aaKnown RBP16.45■□□□□ 0.22
TUBB6-206ENST00000587204 PRDM12Q9H4Q4 367 aa16.45■□□□□ 0.22
TUBB6-206ENST00000587204 RIOX1Q9H6W3 641 aa16.45■□□□□ 0.22
TUBB6-206ENST00000587204 MSRAQ9UJ68 235 aa16.45■□□□□ 0.22
TUBB6-206ENST00000587204 YBX2Q9Y2T7 364 aaKnown RBP16.45■□□□□ 0.22
TUBB6-206ENST00000587204 GBF1Q92538 1859 aa16.44■□□□□ 0.22
TUBB6-206ENST00000587204 GCOM1H8Y6P7 765 aaPredicted RBP16.44■□□□□ 0.22
TUBB6-206ENST00000587204 RGS20O76081 388 aa16.44■□□□□ 0.22
TUBB6-206ENST00000587204 POLR2MP0CAP2 368 aa16.44■□□□□ 0.22
TUBB6-206ENST00000587204 MYOGP15173 224 aa16.44■□□□□ 0.22
TUBB6-206ENST00000587204 PTGISQ16647 500 aa16.44■□□□□ 0.22
TUBB6-206ENST00000587204 IGDCC4Q8TDY8 1250 aa16.44■□□□□ 0.22
TUBB6-206ENST00000587204 PPM1EQ8WY54 764 aa16.44■□□□□ 0.22
TUBB6-206ENST00000587204 GPKOWQ92917 476 aaPredicted RBP eCLIP16.44■□□□□ 0.22
TUBB6-206ENST00000587204 MAF1Q9H063 256 aa16.44■□□□□ 0.22
TUBB6-206ENST00000587204 LSG1Q9H089 658 aaKnown RBP16.44■□□□□ 0.22
TUBB6-206ENST00000587204 SLC4A7Q9Y6M7 1214 aa16.44■□□□□ 0.22
TUBB6-206ENST00000587204 MYH7BA7E2Y1 1941 aa16.44■□□□□ 0.22
TUBB6-206ENST00000587204 CDH23Q9H251 3354 aa16.44■□□□□ 0.22
TUBB6-206ENST00000587204 PNMA6FA0A0J9YX94 578 aa16.43■□□□□ 0.22
TUBB6-206ENST00000587204 PRC1O43663 620 aa16.43■□□□□ 0.22
TUBB6-206ENST00000587204 RXRAP19793 462 aa16.43■□□□□ 0.22
TUBB6-206ENST00000587204 CASTP20810 708 aaKnown RBP16.43■□□□□ 0.22
TUBB6-206ENST00000587204 PGM5Q15124 567 aa16.43■□□□□ 0.22
TUBB6-206ENST00000587204 RAB30Q15771 203 aa16.43■□□□□ 0.22
TUBB6-206ENST00000587204 GDF6Q6KF10 455 aaPredicted RBP16.43■□□□□ 0.22
TUBB6-206ENST00000587204 CASC1Q6TDU7 716 aa16.43■□□□□ 0.22
TUBB6-206ENST00000587204 NFXL1Q6ZNB6 911 aa16.43■□□□□ 0.22
TUBB6-206ENST00000587204 DHX37Q8IY37 1157 aaKnown RBP16.43■□□□□ 0.22
TUBB6-206ENST00000587204 ZNF654Q8IZM8 581 aa16.43■□□□□ 0.22
TUBB6-206ENST00000587204 USP38Q8NB14 1042 aa16.43■□□□□ 0.22
TUBB6-206ENST00000587204 RETREG2Q8NC44 543 aa16.43■□□□□ 0.22
TUBB6-206ENST00000587204 FTOQ9C0B1 505 aaKnown RBP eCLIP16.43■□□□□ 0.22
TUBB6-206ENST00000587204 LY9Q9HBG7 655 aa16.43■□□□□ 0.22
TUBB6-206ENST00000587204 TRIP12Q14669 1992 aaPredicted RBP16.43■□□□□ 0.22
TUBB6-206ENST00000587204 PSEN2P49810 448 aa16.42■□□□□ 0.22
TUBB6-206ENST00000587204 GHRHRQ02643 423 aa16.42■□□□□ 0.22
TUBB6-206ENST00000587204 DGKDQ16760 1214 aa16.42■□□□□ 0.22
TUBB6-206ENST00000587204 CMTR1Q8N1G2 835 aaKnown RBP16.42■□□□□ 0.22
TUBB6-206ENST00000587204 ESYT1Q9BSJ8 1104 aa16.42■□□□□ 0.22
TUBB6-206ENST00000587204 LRRC2Q9BYS8 371 aa16.42■□□□□ 0.22
TUBB6-206ENST00000587204 TET1Q8NFU7 2136 aa16.42■□□□□ 0.22
TUBB6-206ENST00000587204 HAX1O00165 279 aa16.41■□□□□ 0.22
TUBB6-206ENST00000587204 SLC27A2O14975 620 aa16.41■□□□□ 0.22
TUBB6-206ENST00000587204 PLEKHA8P1O95397 391 aa16.41■□□□□ 0.22
TUBB6-206ENST00000587204 GGPS1O95749 300 aa16.41■□□□□ 0.22
TUBB6-206ENST00000587204 IQCF3P0C7M6 154 aa16.41■□□□□ 0.22
TUBB6-206ENST00000587204 ATP2A2P16615 1042 aaKnown RBP16.41■□□□□ 0.22
TUBB6-206ENST00000587204 CCND2P30279 289 aa16.41■□□□□ 0.22
TUBB6-206ENST00000587204 SP2Q02086 613 aa16.41■□□□□ 0.22
TUBB6-206ENST00000587204 PTPN11Q06124 597 aaPredicted RBP16.41■□□□□ 0.22
TUBB6-206ENST00000587204 BFSP2Q13515 415 aa16.41■□□□□ 0.22
TUBB6-206ENST00000587204 LAMC2Q13753 1193 aa16.41■□□□□ 0.22
TUBB6-206ENST00000587204 MFSD10Q14728 455 aa16.41■□□□□ 0.22
TUBB6-206ENST00000587204 VSIG10LQ86VR7 867 aa16.41■□□□□ 0.22
TUBB6-206ENST00000587204 CTCFLQ8NI51 663 aaPredicted RBP16.41■□□□□ 0.22
TUBB6-206ENST00000587204 SPATA33Q96N06 139 aa16.41■□□□□ 0.22
TUBB6-206ENST00000587204 CTAGE1Q96RT6 745 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms