RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 ARHGEF16Q5VV41 709 aa16.31■□□□□ 0.2
ATG4D-206ENST00000586863 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
ATG4D-206ENST00000586863 KAT2BQ92831 832 aa16.31■□□□□ 0.2
ATG4D-206ENST00000586863 MTMR8Q96EF0 704 aa16.31■□□□□ 0.2
ATG4D-206ENST00000586863 CTAGE1Q96RT6 745 aa16.31■□□□□ 0.2
ATG4D-206ENST00000586863 AMNQ9BXJ7 453 aa16.31■□□□□ 0.2
ATG4D-206ENST00000586863 SLC28A3Q9HAS3 691 aa16.31■□□□□ 0.2
ATG4D-206ENST00000586863 PXMP2Q9NR77 195 aa16.31■□□□□ 0.2
ATG4D-206ENST00000586863 MAD2L2Q9UI95 211 aa16.31■□□□□ 0.2
ATG4D-206ENST00000586863 DDX41Q9UJV9 622 aaKnown RBP16.31■□□□□ 0.2
ATG4D-206ENST00000586863 KLRF2D3W0D1 207 aa16.3■□□□□ 0.2
ATG4D-206ENST00000586863 IQCF3P0C7M6 154 aa16.3■□□□□ 0.2
ATG4D-206ENST00000586863 HSD17B4P51659 736 aa16.3■□□□□ 0.2
ATG4D-206ENST00000586863 GHRHRQ02643 423 aa16.3■□□□□ 0.2
ATG4D-206ENST00000586863 PTH1RQ03431 593 aa16.3■□□□□ 0.2
ATG4D-206ENST00000586863 PPP2R2DQ66LE6 453 aa16.3■□□□□ 0.2
ATG4D-206ENST00000586863 SENP2Q9HC62 589 aa16.3■□□□□ 0.2
ATG4D-206ENST00000586863 NOD1Q9Y239 953 aa16.3■□□□□ 0.2
ATG4D-206ENST00000586863 PCDHA11Q9Y5I1 949 aa16.3■□□□□ 0.2
ATG4D-206ENST00000586863 TAF6LQ9Y6J9 622 aa16.3■□□□□ 0.2
ATG4D-206ENST00000586863 PALM3A6NDB9 673 aaPredicted RBP16.29■□□□□ 0.2
ATG4D-206ENST00000586863 ZBTB5O15062 677 aa16.29■□□□□ 0.2
ATG4D-206ENST00000586863 NR3C2P08235 984 aa16.29■□□□□ 0.2
ATG4D-206ENST00000586863 CYP21A2P08686 494 aa16.29■□□□□ 0.2
ATG4D-206ENST00000586863 IGFBP4P22692 258 aa16.29■□□□□ 0.2
ATG4D-206ENST00000586863 RFC2P35250 354 aa16.29■□□□□ 0.2
ATG4D-206ENST00000586863 BFSP2Q13515 415 aa16.29■□□□□ 0.2
ATG4D-206ENST00000586863 PTGISQ16647 500 aa16.29■□□□□ 0.2
ATG4D-206ENST00000586863 GDF6Q6KF10 455 aaPredicted RBP16.29■□□□□ 0.2
ATG4D-206ENST00000586863 SESTD1Q86VW0 696 aa16.29■□□□□ 0.2
ATG4D-206ENST00000586863 RETREG2Q8NC44 543 aa16.29■□□□□ 0.2
ATG4D-206ENST00000586863 EMID1Q96A84 441 aaPredicted RBP16.29■□□□□ 0.2
ATG4D-206ENST00000586863 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
ATG4D-206ENST00000586863 MRVI1Q9Y6F6 885 aa16.29■□□□□ 0.2
ATG4D-206ENST00000586863 EIF3JO75822 258 aaKnown RBP16.28■□□□□ 0.2
ATG4D-206ENST00000586863 ACTN1P12814 892 aa16.28■□□□□ 0.2
ATG4D-206ENST00000586863 CASTP20810 708 aaKnown RBP16.28■□□□□ 0.2
ATG4D-206ENST00000586863 CHMLP26374 656 aa16.28■□□□□ 0.2
ATG4D-206ENST00000586863 HOXA13P31271 388 aaPredicted RBP16.28■□□□□ 0.2
ATG4D-206ENST00000586863 GRM4Q14833 912 aa16.28■□□□□ 0.2
ATG4D-206ENST00000586863 CCDC85BQ15834 202 aaPredicted RBP16.28■□□□□ 0.2
ATG4D-206ENST00000586863 TJAP1Q5JTD0 557 aa16.28■□□□□ 0.2
ATG4D-206ENST00000586863 HOMER1Q86YM7 354 aa16.28■□□□□ 0.2
ATG4D-206ENST00000586863 IL31RAQ8NI17 732 aa16.28■□□□□ 0.2
ATG4D-206ENST00000586863 DHX38Q92620 1227 aaKnown RBP16.28■□□□□ 0.2
ATG4D-206ENST00000586863 PDCD2LQ9BRP1 358 aa16.28■□□□□ 0.2
ATG4D-206ENST00000586863 PCDHA1Q9Y5I3 950 aa16.28■□□□□ 0.2
ATG4D-206ENST00000586863 DOCK5Q9H7D0 1870 aa16.27■□□□□ 0.2
ATG4D-206ENST00000586863 RBAK-RBAKDNI3L0D1 243 aa16.27■□□□□ 0.2
ATG4D-206ENST00000586863 RGS20O76081 388 aa16.27■□□□□ 0.2
ATG4D-206ENST00000586863 CA3P07451 260 aa16.27■□□□□ 0.2
ATG4D-206ENST00000586863 ZNF286BP0CG31 522 aa16.27■□□□□ 0.2
ATG4D-206ENST00000586863 MYCLP12524 364 aaPredicted RBP16.27■□□□□ 0.2
ATG4D-206ENST00000586863 TRDNQ13061 729 aa16.27■□□□□ 0.2
ATG4D-206ENST00000586863 DGKDQ16760 1214 aa16.27■□□□□ 0.2
ATG4D-206ENST00000586863 STOX1Q6ZVD7 989 aa16.27■□□□□ 0.2
ATG4D-206ENST00000586863 CAGE1Q8TC20 777 aa16.27■□□□□ 0.2
ATG4D-206ENST00000586863 PIGSQ96S52 555 aa16.27■□□□□ 0.2
ATG4D-206ENST00000586863 SLC9A7Q96T83 725 aa16.27■□□□□ 0.2
ATG4D-206ENST00000586863 FTOQ9C0B1 505 aaKnown RBP eCLIP16.27■□□□□ 0.2
ATG4D-206ENST00000586863 U3KPZ7 1027 aaPredicted RBP16.27■□□□□ 0.2
ATG4D-206ENST00000586863 IFIT3O14879 490 aaKnown RBP16.26■□□□□ 0.19
ATG4D-206ENST00000586863 CYTH3O43739 400 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 SORBS3O60504 671 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 ARHGEF15O94989 841 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 F2P00734 622 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 PSEN2P49810 448 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 IRX6P78412 446 aaPredicted RBP16.26■□□□□ 0.19
ATG4D-206ENST00000586863 GPNMBQ14956 572 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 TMEM67Q5HYA8 995 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 PPTC7Q8NI37 304 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 AFAP1L1Q8TED9 768 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 RUFY2Q8WXA3 655 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 SYMPKQ92797 1274 aaKnown RBP16.26■□□□□ 0.19
ATG4D-206ENST00000586863 RIOX1Q9H6W3 641 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 THEGQ9P2T0 379 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 HDAC6Q9UBN7 1215 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 GTF2IRD1Q9UHL9 959 aa16.26■□□□□ 0.19
ATG4D-206ENST00000586863 E7EWF7 191 aa16.25■□□□□ 0.19
ATG4D-206ENST00000586863 HOXD8P13378 290 aaPredicted RBP16.25■□□□□ 0.19
ATG4D-206ENST00000586863 TROAPQ12815 778 aa16.25■□□□□ 0.19
ATG4D-206ENST00000586863 LAMC2Q13753 1193 aa16.25■□□□□ 0.19
ATG4D-206ENST00000586863 MFSD10Q14728 455 aa16.25■□□□□ 0.19
ATG4D-206ENST00000586863 PGM5Q15124 567 aa16.25■□□□□ 0.19
ATG4D-206ENST00000586863 RALYLQ86SE5 291 aaKnown RBP16.25■□□□□ 0.19
ATG4D-206ENST00000586863 VSIG10LQ86VR7 867 aa16.25■□□□□ 0.19
ATG4D-206ENST00000586863 DHX37Q8IY37 1157 aaKnown RBP16.25■□□□□ 0.19
ATG4D-206ENST00000586863 CCDC155Q8N6L0 562 aa16.25■□□□□ 0.19
ATG4D-206ENST00000586863 ZFP91Q96JP5 570 aaPredicted RBP16.25■□□□□ 0.19
ATG4D-206ENST00000586863 ALG1Q9BT22 464 aa16.25■□□□□ 0.19
ATG4D-206ENST00000586863 TCF20Q9UGU0 1960 aaKnown RBP16.25■□□□□ 0.19
ATG4D-206ENST00000586863 EPOPA6NHQ4 379 aa16.24■□□□□ 0.19
ATG4D-206ENST00000586863 HAS3O00219 553 aa16.24■□□□□ 0.19
ATG4D-206ENST00000586863 RFXAPO00287 272 aa16.24■□□□□ 0.19
ATG4D-206ENST00000586863 SGSM2O43147 1006 aa16.24■□□□□ 0.19
ATG4D-206ENST00000586863 SELPP16109 830 aa16.24■□□□□ 0.19
ATG4D-206ENST00000586863 UBA1P22314 1058 aaKnown RBP16.24■□□□□ 0.19
ATG4D-206ENST00000586863 ANTXR2P58335 489 aa16.24■□□□□ 0.19
ATG4D-206ENST00000586863 RBL2Q08999 1139 aa16.24■□□□□ 0.19
ATG4D-206ENST00000586863 WTAPQ15007 396 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms