RNA–Protein interactions for RNA: ENST00000586667.1

DNMT1-208, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-208ENST00000586667 INPP4AQ96PE3 977 aaPredicted RBP14.36□□□□□ -0.11
DNMT1-208ENST00000586667 FTOQ9C0B1 505 aaKnown RBP eCLIP14.36□□□□□ -0.11
DNMT1-208ENST00000586667 ADD3Q9UEY8 706 aaKnown RBP14.36□□□□□ -0.11
DNMT1-208ENST00000586667 SLC37A4O43826 429 aa14.35□□□□□ -0.11
DNMT1-208ENST00000586667 SEMA3FQ13275 785 aa14.35□□□□□ -0.11
DNMT1-208ENST00000586667 NEK8Q86SG6 692 aa14.35□□□□□ -0.11
DNMT1-208ENST00000586667 MSL3Q8N5Y2 521 aaKnown RBP14.35□□□□□ -0.11
DNMT1-208ENST00000586667 IWS1Q96ST2 819 aa14.35□□□□□ -0.11
DNMT1-208ENST00000586667 TINF2Q9BSI4 451 aa14.35□□□□□ -0.11
DNMT1-208ENST00000586667 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
DNMT1-208ENST00000586667 TRIM17Q9Y577 477 aa14.35□□□□□ -0.11
DNMT1-208ENST00000586667 UBIAD1Q9Y5Z9 338 aa14.35□□□□□ -0.11
DNMT1-208ENST00000586667 PTCH2Q9Y6C5 1203 aa14.35□□□□□ -0.11
DNMT1-208ENST00000586667 BRCA2P51587 3418 aa14.35□□□□□ -0.11
DNMT1-208ENST00000586667 CYP3A7-CYP3A51PA0A087WV96 503 aa14.34□□□□□ -0.11
DNMT1-208ENST00000586667 ELNP15502 786 aa14.34□□□□□ -0.11
DNMT1-208ENST00000586667 CYP3A7P24462 503 aa14.34□□□□□ -0.11
DNMT1-208ENST00000586667 CCND2P30279 289 aa14.34□□□□□ -0.11
DNMT1-208ENST00000586667 TRAPPC10P48553 1259 aa14.34□□□□□ -0.11
DNMT1-208ENST00000586667 TRIM32Q13049 653 aa14.34□□□□□ -0.11
DNMT1-208ENST00000586667 XRRA1Q6P2D8 792 aa14.34□□□□□ -0.11
DNMT1-208ENST00000586667 MOXD1Q6UVY6 613 aa14.34□□□□□ -0.11
DNMT1-208ENST00000586667 FBXO16Q8IX29 292 aaPredicted RBP14.34□□□□□ -0.11
DNMT1-208ENST00000586667 ZSCAN16Q9H4T2 348 aaPredicted RBP14.34□□□□□ -0.11
DNMT1-208ENST00000586667 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.34□□□□□ -0.11
DNMT1-208ENST00000586667 ASB14A6NK59 587 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 MEIS1O00470 390 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 ADCY6O43306 1168 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 CYP2C19P33261 490 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 USP11P51784 963 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 PRMT2P55345 433 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 NUCB2P80303 420 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 GNL2Q13823 731 aaKnown RBP14.33□□□□□ -0.12
DNMT1-208ENST00000586667 LETM2Q2VYF4 491 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 CEP55Q53EZ4 464 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 TTC38Q5R3I4 469 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 MAP3K21Q5TCX8 1036 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 PPP4R3AQ6IN85 833 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 TRPV1Q8NER1 839 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 EHMT1Q9H9B1 1298 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 SLC5A4Q9NY91 659 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 CHMP5Q9NZZ3 219 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 PCDHB6Q9Y5E3 794 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 FRMPD3Q5JV73 1810 aa14.33□□□□□ -0.12
DNMT1-208ENST00000586667 ARIH2O95376 493 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 ZNF865P0CJ78 1059 aaPredicted RBP14.32□□□□□ -0.12
DNMT1-208ENST00000586667 MYCLP12524 364 aaPredicted RBP14.32□□□□□ -0.12
DNMT1-208ENST00000586667 CYBAP13498 195 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 PDE4DQ08499 809 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 Q4G0T1 1027 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 RILPL1Q5EBL4 403 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 TMEM63BQ5T3F8 832 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 TAPT1Q6NXT6 567 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 NIPA1Q7RTP0 329 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 CTU1Q7Z7A3 348 aaKnown RBP14.32□□□□□ -0.12
DNMT1-208ENST00000586667 POTEDQ86YR6 584 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 ETNPPLQ8TBG4 499 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 PXYLP1Q8TE99 480 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 USP28Q96RU2 1077 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 MXRA8Q9BRK3 442 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 KCNMB3Q9NPA1 279 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.32□□□□□ -0.12
DNMT1-208ENST00000586667 PTPN22Q9Y2R2 807 aa14.32□□□□□ -0.12
DNMT1-208ENST00000586667 DOCK5Q9H7D0 1870 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 RBM47A0AV96 593 aaKnown RBP14.31□□□□□ -0.12
DNMT1-208ENST00000586667 ADCY3O60266 1144 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 EIF3JO75822 258 aaKnown RBP14.31□□□□□ -0.12
DNMT1-208ENST00000586667 STAM2O75886 525 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 HMGCRP04035 888 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 GCFC2P16383 781 aaKnown RBP14.31□□□□□ -0.12
DNMT1-208ENST00000586667 PTGS1P23219 599 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 HOXD10P28358 340 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 ICAM3P32942 547 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 ITGB3BPQ13352 177 aaPredicted RBP14.31□□□□□ -0.12
DNMT1-208ENST00000586667 PTPAQ15257 358 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 STXBP2Q15833 593 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 EEPD1Q7L9B9 569 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 C4orf32Q8N8J7 132 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 GPRASP2Q96D09 838 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 WDR11Q9BZH6 1224 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 TMEM60Q9H2L4 133 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 VTA1Q9NP79 307 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 JADE2Q9NQC1 790 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 PDGFCQ9NRA1 345 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 RTEL1Q9NZ71 1219 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 MRVI1Q9Y6F6 885 aa14.31□□□□□ -0.12
DNMT1-208ENST00000586667 SPATA31C2B4DYI2 1134 aa14.3□□□□□ -0.12
DNMT1-208ENST00000586667 MSH4O15457 936 aa14.3□□□□□ -0.12
DNMT1-208ENST00000586667 CCNT1O60563 726 aaKnown RBP14.3□□□□□ -0.12
DNMT1-208ENST00000586667 ARP10275 920 aa14.3□□□□□ -0.12
DNMT1-208ENST00000586667 KCNA2P16389 499 aa14.3□□□□□ -0.12
DNMT1-208ENST00000586667 ATP2B1P20020 1258 aa14.3□□□□□ -0.12
DNMT1-208ENST00000586667 UBA1P22314 1058 aaKnown RBP14.3□□□□□ -0.12
DNMT1-208ENST00000586667 NASPP49321 788 aaPredicted RBP14.3□□□□□ -0.12
DNMT1-208ENST00000586667 DNM1Q05193 864 aaKnown RBP14.3□□□□□ -0.12
DNMT1-208ENST00000586667 ORC2Q13416 577 aaPredicted RBP14.3□□□□□ -0.12
DNMT1-208ENST00000586667 ARHGEF6Q15052 776 aa14.3□□□□□ -0.12
DNMT1-208ENST00000586667 PRR16Q569H4 304 aa14.3□□□□□ -0.12
DNMT1-208ENST00000586667 CCDC62Q6P9F0 684 aa14.3□□□□□ -0.12
DNMT1-208ENST00000586667 TRMT44Q8IYL2 757 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms