RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 TSPYL2Q9H2G4 693 aaPredicted RBP17.49■□□□□ 0.39
VAPA-209ENST00000585042 PRDM6Q9NQX0 595 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 THEGQ9P2T0 379 aa17.49■□□□□ 0.39
VAPA-209ENST00000585042 GBF1Q92538 1859 aa17.48■□□□□ 0.39
VAPA-209ENST00000585042 KIF28PB7ZC32 967 aa17.48■□□□□ 0.39
VAPA-209ENST00000585042 NR3C2P08235 984 aa17.48■□□□□ 0.39
VAPA-209ENST00000585042 MMP3P08254 477 aa17.48■□□□□ 0.39
VAPA-209ENST00000585042 HSD17B4P51659 736 aa17.48■□□□□ 0.39
VAPA-209ENST00000585042 MRPS5P82675 430 aaKnown RBP17.48■□□□□ 0.39
VAPA-209ENST00000585042 RBL2Q08999 1139 aa17.48■□□□□ 0.39
VAPA-209ENST00000585042 LAMC2Q13753 1193 aa17.48■□□□□ 0.39
VAPA-209ENST00000585042 PTGISQ16647 500 aa17.48■□□□□ 0.39
VAPA-209ENST00000585042 MTMR8Q96EF0 704 aa17.48■□□□□ 0.39
VAPA-209ENST00000585042 VAT1LQ9HCJ6 419 aa17.48■□□□□ 0.39
VAPA-209ENST00000585042 COL20A1Q9P218 1284 aa17.48■□□□□ 0.39
VAPA-209ENST00000585042 DDX41Q9UJV9 622 aaKnown RBP17.48■□□□□ 0.39
VAPA-209ENST00000585042 SPTBN5Q9NRC6 3674 aaKnown RBP17.48■□□□□ 0.39
VAPA-209ENST00000585042 TTC28Q96AY4 2481 aa17.47■□□□□ 0.39
VAPA-209ENST00000585042 KIAA1217Q5T5P2 1943 aa17.47■□□□□ 0.39
VAPA-209ENST00000585042 KLRF2D3W0D1 207 aa17.47■□□□□ 0.39
VAPA-209ENST00000585042 DHX16O60231 1041 aaKnown RBP17.47■□□□□ 0.39
VAPA-209ENST00000585042 SEC23AQ15436 765 aa17.47■□□□□ 0.39
VAPA-209ENST00000585042 STOX1Q6ZVD7 989 aa17.47■□□□□ 0.39
VAPA-209ENST00000585042 PPM1EQ8WY54 764 aa17.47■□□□□ 0.39
VAPA-209ENST00000585042 KATNAL1Q9BW62 490 aa17.47■□□□□ 0.39
VAPA-209ENST00000585042 FTOQ9C0B1 505 aaKnown RBP eCLIP17.47■□□□□ 0.398e-8■□□□□ 8.7
VAPA-209ENST00000585042 PXMP2Q9NR77 195 aa17.47■□□□□ 0.39
VAPA-209ENST00000585042 PALM3A6NDB9 673 aaPredicted RBP17.46■□□□□ 0.39
VAPA-209ENST00000585042 TNFRSF10AO00220 468 aa17.46■□□□□ 0.39
VAPA-209ENST00000585042 ZBTB5O15062 677 aa17.46■□□□□ 0.39
VAPA-209ENST00000585042 PPFIA4O75335 1185 aa17.46■□□□□ 0.39
VAPA-209ENST00000585042 CFBP00751 764 aa17.46■□□□□ 0.39
VAPA-209ENST00000585042 TGFB3P10600 412 aa17.46■□□□□ 0.39
VAPA-209ENST00000585042 TRDNQ13061 729 aa17.46■□□□□ 0.39
VAPA-209ENST00000585042 PPTC7Q8NI37 304 aa17.46■□□□□ 0.39
VAPA-209ENST00000585042 EXOC6Q8TAG9 804 aa17.46■□□□□ 0.39
VAPA-209ENST00000585042 KAT2BQ92831 832 aa17.46■□□□□ 0.39
VAPA-209ENST00000585042 CHD7Q9P2D1 2997 aa17.46■□□□□ 0.38
VAPA-209ENST00000585042 MYH6P13533 1939 aa17.45■□□□□ 0.38
VAPA-209ENST00000585042 MYOGP15173 224 aa17.45■□□□□ 0.38
VAPA-209ENST00000585042 SELPP16109 830 aa17.45■□□□□ 0.38
VAPA-209ENST00000585042 GDF6Q6KF10 455 aaPredicted RBP17.45■□□□□ 0.38
VAPA-209ENST00000585042 VSIG10LQ86VR7 867 aa17.45■□□□□ 0.38
VAPA-209ENST00000585042 HERC6Q8IVU3 1022 aa17.45■□□□□ 0.38
VAPA-209ENST00000585042 DHX37Q8IY37 1157 aaKnown RBP17.45■□□□□ 0.38
VAPA-209ENST00000585042 STAG2Q8N3U4 1231 aa17.45■□□□□ 0.38
VAPA-209ENST00000585042 RUFY2Q8WXA3 655 aa17.45■□□□□ 0.38
VAPA-209ENST00000585042 GTF2IRD1Q9UHL9 959 aa17.45■□□□□ 0.38
VAPA-209ENST00000585042 MAD2L2Q9UI95 211 aa17.45■□□□□ 0.38
VAPA-209ENST00000585042 MRVI1Q9Y6F6 885 aa17.45■□□□□ 0.38
VAPA-209ENST00000585042 U3KPZ7 1027 aaPredicted RBP17.45■□□□□ 0.38
VAPA-209ENST00000585042 SCN5AQ14524 2016 aa17.45■□□□□ 0.38
VAPA-209ENST00000585042 HAS3O00219 553 aa17.44■□□□□ 0.38
VAPA-209ENST00000585042 OPLAHO14841 1288 aa17.44■□□□□ 0.38
VAPA-209ENST00000585042 CA3P07451 260 aa17.44■□□□□ 0.38
VAPA-209ENST00000585042 HOXD8P13378 290 aaPredicted RBP17.44■□□□□ 0.38
VAPA-209ENST00000585042 EIF2AK2P19525 551 aaKnown RBP17.44■□□□□ 0.38
VAPA-209ENST00000585042 CCDC85BQ15834 202 aaPredicted RBP17.44■□□□□ 0.38
VAPA-209ENST00000585042 AAK1Q2M2I8 961 aa17.44■□□□□ 0.38
VAPA-209ENST00000585042 CHST3Q7LGC8 479 aa17.44■□□□□ 0.38
VAPA-209ENST00000585042 C7orf31Q8N865 590 aa17.44■□□□□ 0.38
VAPA-209ENST00000585042 CTAGE1Q96RT6 745 aa17.44■□□□□ 0.38
VAPA-209ENST00000585042 PDCD2LQ9BRP1 358 aa17.44■□□□□ 0.38
VAPA-209ENST00000585042 RIOX1Q9H6W3 641 aa17.44■□□□□ 0.38
VAPA-209ENST00000585042 PCDHA1Q9Y5I3 950 aa17.44■□□□□ 0.38
VAPA-209ENST00000585042 TRANK1O15050 2925 aa17.43■□□□□ 0.38
VAPA-209ENST00000585042 GTPBP6O43824 516 aaPredicted RBP17.43■□□□□ 0.38
VAPA-209ENST00000585042 EFCAB14O75071 495 aa17.43■□□□□ 0.38
VAPA-209ENST00000585042 F2P00734 622 aa17.43■□□□□ 0.38
VAPA-209ENST00000585042 CXCL10P02778 98 aa17.43■□□□□ 0.38
VAPA-209ENST00000585042 ATXN8OSP0DMR3 200 aa17.43■□□□□ 0.38
VAPA-209ENST00000585042 KCNJ6P48051 423 aa17.43■□□□□ 0.38
VAPA-209ENST00000585042 PSEN2P49810 448 aa17.43■□□□□ 0.38
VAPA-209ENST00000585042 PTK7Q13308 1070 aa17.43■□□□□ 0.38
VAPA-209ENST00000585042 MYSM1Q5VVJ2 828 aa17.43■□□□□ 0.38
VAPA-209ENST00000585042 LRRC8DQ7L1W4 858 aa17.43■□□□□ 0.38
VAPA-209ENST00000585042 TANC1Q9C0D5 1861 aa17.43■□□□□ 0.38
VAPA-209ENST00000585042 TRIP12Q14669 1992 aaPredicted RBP17.42■□□□□ 0.38
VAPA-209ENST00000585042 ABHD14A-ACY1A0A1B0GW23 586 aa17.42■□□□□ 0.38
VAPA-209ENST00000585042 ERICH2A1L162 156 aa17.42■□□□□ 0.38
VAPA-209ENST00000585042 CKBP12277 381 aa17.42■□□□□ 0.38
VAPA-209ENST00000585042 CHMP4BP1P59074 171 aa17.42■□□□□ 0.38
VAPA-209ENST00000585042 GPNMBQ14956 572 aa17.42■□□□□ 0.38
VAPA-209ENST00000585042 CELF3Q5SZQ8 465 aaKnown RBP17.42■□□□□ 0.38
VAPA-209ENST00000585042 TTC22Q5TAA0 569 aa17.42■□□□□ 0.38
VAPA-209ENST00000585042 CNKSR3Q6P9H4 555 aa17.42■□□□□ 0.38
VAPA-209ENST00000585042 CYB5R4Q7L1T6 521 aa17.42■□□□□ 0.38
VAPA-209ENST00000585042 IL27Q8NEV9 243 aa17.42■□□□□ 0.38
VAPA-209ENST00000585042 PPP1R13LQ8WUF5 828 aa17.42■□□□□ 0.38
VAPA-209ENST00000585042 HDAC6Q9UBN7 1215 aa17.42■□□□□ 0.38
VAPA-209ENST00000585042 MTCH2Q9Y6C9 303 aa17.42■□□□□ 0.38
VAPA-209ENST00000585042 GCOM1H8Y6P7 765 aaPredicted RBP17.41■□□□□ 0.38
VAPA-209ENST00000585042 PPP1R11O60927 126 aaPredicted RBP17.41■□□□□ 0.38
VAPA-209ENST00000585042 STAM2O75886 525 aa17.41■□□□□ 0.38
VAPA-209ENST00000585042 RGS20O76081 388 aa17.41■□□□□ 0.38
VAPA-209ENST00000585042 POLR2MP0CAP2 368 aa17.41■□□□□ 0.38
VAPA-209ENST00000585042 TAP1Q03518 808 aa17.41■□□□□ 0.38
VAPA-209ENST00000585042 MFSD10Q14728 455 aa17.41■□□□□ 0.38
VAPA-209ENST00000585042 GRM4Q14833 912 aa17.41■□□□□ 0.38
VAPA-209ENST00000585042 SART3Q15020 963 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms