RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 SH2B2O14492 632 aaPredicted RBP25.87■■□□□ 1.73
CASC3-207ENST00000581849 LY6KQ17RY6 165 aa25.87■■□□□ 1.73
CASC3-207ENST00000581849 ZNF365Q70YC5 407 aa25.87■■□□□ 1.73
CASC3-207ENST00000581849 VSIG10LQ86VR7 867 aa25.87■■□□□ 1.73
CASC3-207ENST00000581849 SESTD1Q86VW0 696 aa25.87■■□□□ 1.73
CASC3-207ENST00000581849 RPUSD2Q8IZ73 545 aaKnown RBP25.87■■□□□ 1.73
CASC3-207ENST00000581849 AFG1LQ8WV93 481 aa25.87■■□□□ 1.73
CASC3-207ENST00000581849 WNT8AQ9H1J5 351 aa25.87■■□□□ 1.73
CASC3-207ENST00000581849 ANO2Q9NQ90 1003 aa25.87■■□□□ 1.73
CASC3-207ENST00000581849 TRMT13Q9NUP7 481 aaKnown RBP25.87■■□□□ 1.73
CASC3-207ENST00000581849 MRVI1Q9Y6F6 885 aa25.87■■□□□ 1.73
CASC3-207ENST00000581849 UMODL1Q5DID0 1318 aa25.87■■□□□ 1.73
CASC3-207ENST00000581849 PFKMP08237 780 aa25.86■■□□□ 1.73
CASC3-207ENST00000581849 CALM1P0DP23 149 aa25.86■■□□□ 1.73
CASC3-207ENST00000581849 CALM2P0DP24 149 aa25.86■■□□□ 1.73
CASC3-207ENST00000581849 CALM3P0DP25 149 aa25.86■■□□□ 1.73
CASC3-207ENST00000581849 CASTP20810 708 aaKnown RBP25.86■■□□□ 1.73
CASC3-207ENST00000581849 LAMC2Q13753 1193 aa25.86■■□□□ 1.73
CASC3-207ENST00000581849 PGM5Q15124 567 aa25.86■■□□□ 1.73
CASC3-207ENST00000581849 RNF20Q5VTR2 975 aa25.86■■□□□ 1.73
CASC3-207ENST00000581849 SLC17A8Q8NDX2 589 aa25.86■■□□□ 1.73
CASC3-207ENST00000581849 TTYH1Q9H313 450 aaPredicted RBP25.86■■□□□ 1.73
CASC3-207ENST00000581849 FGBP02675 491 aa25.85■■□□□ 1.73
CASC3-207ENST00000581849 ACRP10323 421 aa25.85■■□□□ 1.73
CASC3-207ENST00000581849 TGFB3P10600 412 aa25.85■■□□□ 1.73
CASC3-207ENST00000581849 HOXA13P31271 388 aaPredicted RBP25.85■■□□□ 1.73
CASC3-207ENST00000581849 DGKDQ16760 1214 aa25.85■■□□□ 1.73
CASC3-207ENST00000581849 FAM47CQ5HY64 1035 aa25.85■■□□□ 1.73
CASC3-207ENST00000581849 RRP36Q96EU6 259 aaKnown RBP25.85■■□□□ 1.73
CASC3-207ENST00000581849 FAM161BQ96MY7 647 aa25.85■■□□□ 1.73
CASC3-207ENST00000581849 FRMPD4Q14CM0 1322 aa25.85■■□□□ 1.73
CASC3-207ENST00000581849 CCDC69A6NI79 296 aa25.84■■□□□ 1.73
CASC3-207ENST00000581849 PITPNM1O00562 1244 aa25.84■■□□□ 1.73
CASC3-207ENST00000581849 DNAJB2P25686 324 aa25.84■■□□□ 1.73
CASC3-207ENST00000581849 CCND2P30279 289 aa25.84■■□□□ 1.73
CASC3-207ENST00000581849 CCL23P55773 120 aa25.84■■□□□ 1.73
CASC3-207ENST00000581849 PPTC7Q8NI37 304 aa25.84■■□□□ 1.73
CASC3-207ENST00000581849 CDX2Q99626 313 aaPredicted RBP25.84■■□□□ 1.73
CASC3-207ENST00000581849 STAM2O75886 525 aa25.83■■□□□ 1.73
CASC3-207ENST00000581849 RGS20O76081 388 aa25.83■■□□□ 1.73
CASC3-207ENST00000581849 CYP2C9P11712 490 aa25.83■■□□□ 1.73
CASC3-207ENST00000581849 MYCLP12524 364 aaPredicted RBP25.83■■□□□ 1.73
CASC3-207ENST00000581849 HOXD8P13378 290 aaPredicted RBP25.83■■□□□ 1.73
CASC3-207ENST00000581849 RFC2P35250 354 aa25.83■■□□□ 1.73
CASC3-207ENST00000581849 NFXL1Q6ZNB6 911 aa25.83■■□□□ 1.73
CASC3-207ENST00000581849 KATNAL1Q9BW62 490 aa25.83■■□□□ 1.73
CASC3-207ENST00000581849 SEC63Q9UGP8 760 aaKnown RBP25.83■■□□□ 1.73
CASC3-207ENST00000581849 BFSP2Q13515 415 aa25.82■■□□□ 1.72
CASC3-207ENST00000581849 SGMS1Q86VZ5 419 aa25.82■■□□□ 1.72
CASC3-207ENST00000581849 DHX37Q8IY37 1157 aaKnown RBP25.82■■□□□ 1.72
CASC3-207ENST00000581849 KAT2BQ92831 832 aa25.82■■□□□ 1.72
CASC3-207ENST00000581849 MYL10Q9BUA6 226 aa25.82■■□□□ 1.72
CASC3-207ENST00000581849 TANC1Q9C0D5 1861 aa25.81■■□□□ 1.72
CASC3-207ENST00000581849 PIK3CDO00329 1044 aa25.81■■□□□ 1.72
CASC3-207ENST00000581849 FCHSD1Q86WN1 690 aa25.81■■□□□ 1.72
CASC3-207ENST00000581849 IL31RAQ8NI17 732 aa25.81■■□□□ 1.72
CASC3-207ENST00000581849 TIFAQ96CG3 184 aa25.81■■□□□ 1.72
CASC3-207ENST00000581849 SLC12A7Q9Y666 1083 aa25.81■■□□□ 1.72
CASC3-207ENST00000581849 MYH7BA7E2Y1 1941 aa25.8■■□□□ 1.72
CASC3-207ENST00000581849 CDC45O75419 566 aa25.8■■□□□ 1.72
CASC3-207ENST00000581849 F2P00734 622 aa25.8■■□□□ 1.72
CASC3-207ENST00000581849 RAB30Q15771 203 aa25.8■■□□□ 1.72
CASC3-207ENST00000581849 GNPTABQ3T906 1256 aa25.8■■□□□ 1.72
CASC3-207ENST00000581849 CELF3Q5SZQ8 465 aaKnown RBP25.8■■□□□ 1.72
CASC3-207ENST00000581849 MYSM1Q5VVJ2 828 aa25.8■■□□□ 1.72
CASC3-207ENST00000581849 NOD1Q9Y239 953 aa25.8■■□□□ 1.72
CASC3-207ENST00000581849 PPFIA4O75335 1185 aa25.79■■□□□ 1.72
CASC3-207ENST00000581849 ICAM3P32942 547 aa25.79■■□□□ 1.72
CASC3-207ENST00000581849 TSGA10IPQ3SY00 556 aa25.79■■□□□ 1.72
CASC3-207ENST00000581849 CCDC155Q8N6L0 562 aa25.79■■□□□ 1.72
CASC3-207ENST00000581849 RETREG2Q8NC44 543 aa25.79■■□□□ 1.72
CASC3-207ENST00000581849 CAGE1Q8TC20 777 aa25.79■■□□□ 1.72
CASC3-207ENST00000581849 CUL5Q93034 780 aa25.79■■□□□ 1.72
CASC3-207ENST00000581849 VWCEQ96DN2 955 aa25.79■■□□□ 1.72
CASC3-207ENST00000581849 SCLYQ96I15 445 aa25.79■■□□□ 1.72
CASC3-207ENST00000581849 PBX4Q9BYU1 374 aa25.79■■□□□ 1.72
CASC3-207ENST00000581849 HAS3O00219 553 aa25.78■■□□□ 1.72
CASC3-207ENST00000581849 PLEKHA8P1O95397 391 aa25.78■■□□□ 1.72
CASC3-207ENST00000581849 PTGISQ16647 500 aa25.78■■□□□ 1.72
CASC3-207ENST00000581849 XRRA1Q6P2D8 792 aa25.78■■□□□ 1.72
CASC3-207ENST00000581849 SRBD1Q8N5C6 995 aaKnown RBP25.78■■□□□ 1.72
CASC3-207ENST00000581849 INPP4AQ96PE3 977 aaPredicted RBP25.78■■□□□ 1.72
CASC3-207ENST00000581849 NEK1Q96PY6 1258 aa25.78■■□□□ 1.72
CASC3-207ENST00000581849 ZNF576Q9H609 170 aa25.78■■□□□ 1.72
CASC3-207ENST00000581849 CXXC1Q9P0U4 656 aaPredicted RBP25.78■■□□□ 1.72
CASC3-207ENST00000581849 GTF2IRD1Q9UHL9 959 aa25.78■■□□□ 1.72
CASC3-207ENST00000581849 GGPS1O95749 300 aa25.77■■□□□ 1.72
CASC3-207ENST00000581849 UBA1P22314 1058 aaKnown RBP25.77■■□□□ 1.72
CASC3-207ENST00000581849 PSEN2P49810 448 aa25.77■■□□□ 1.72
CASC3-207ENST00000581849 RBL2Q08999 1139 aa25.77■■□□□ 1.72
CASC3-207ENST00000581849 COL9A3Q14050 684 aaPredicted RBP25.77■■□□□ 1.72
CASC3-207ENST00000581849 OTOP2Q7RTS6 562 aa25.77■■□□□ 1.72
CASC3-207ENST00000581849 SMARCC2Q8TAQ2 1214 aa25.77■■□□□ 1.72
CASC3-207ENST00000581849 AFAP1L1Q8TED9 768 aa25.77■■□□□ 1.72
CASC3-207ENST00000581849 PIBF1Q8WXW3 757 aa25.77■■□□□ 1.72
CASC3-207ENST00000581849 IQCF3P0C7M6 154 aa25.76■■□□□ 1.71
CASC3-207ENST00000581849 KRT32Q14532 448 aa25.76■■□□□ 1.71
CASC3-207ENST00000581849 MFSD10Q14728 455 aa25.76■■□□□ 1.71
CASC3-207ENST00000581849 TMTC3Q6ZXV5 915 aa25.76■■□□□ 1.71
CASC3-207ENST00000581849 SKAP1Q86WV1 359 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms