RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 COBLO75128 1261 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 PDIA4P13667 645 aaKnown RBP13.92□□□□□ -0.18
CCDC84-209ENST00000580556 PDCP20941 246 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 DNAJB2P25686 324 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 CALML3P27482 149 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 GNA11P29992 359 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 PLA2G5P39877 138 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 LRRC41Q15345 812 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 DAGLBQ8NCG7 672 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 BICD2Q8TD16 824 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 CUL5Q93034 780 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 RIC8AQ9NPQ8 531 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 HOMER2Q9NSB8 354 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 VPS54Q9P1Q0 977 aa13.92□□□□□ -0.18
CCDC84-209ENST00000580556 SEPT4O43236 478 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 FCER1AP12319 257 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 ADORA2AP29274 412 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 HSD17B4P51659 736 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 ADCY7P51828 1080 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 MRPL12P52815 198 aaKnown RBP13.91□□□□□ -0.18
CCDC84-209ENST00000580556 TRIM29Q14134 588 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 KCTD2Q14681 263 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 MUM1L1Q5H9M0 696 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 MCTP2Q6DN12 878 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 DPP9Q86TI2 863 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 FBXO18Q8NFZ0 1043 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 C8orf76Q96K31 380 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 AIFM3Q96NN9 605 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 PHF20Q9BVI0 1012 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 ZNF576Q9H609 170 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 PSTPIP2Q9H939 334 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 C6orf50Q9HD87 102 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 A1CFQ9NQ94 594 aaKnown RBP13.91□□□□□ -0.18
CCDC84-209ENST00000580556 SMCHD1A6NHR9 2005 aa13.91□□□□□ -0.18
CCDC84-209ENST00000580556 SMCO2A6NFE2 343 aa13.9□□□□□ -0.18
CCDC84-209ENST00000580556 GCOM1H8Y6P7 765 aaPredicted RBP13.9□□□□□ -0.18
CCDC84-209ENST00000580556 POLR2MP0CAP2 368 aa13.9□□□□□ -0.18
CCDC84-209ENST00000580556 TAL1P17542 331 aaPredicted RBP13.9□□□□□ -0.18
CCDC84-209ENST00000580556 NPY5RQ15761 445 aa13.9□□□□□ -0.18
CCDC84-209ENST00000580556 RNF207Q6ZRF8 634 aa13.9□□□□□ -0.18
CCDC84-209ENST00000580556 ANKRD35Q8N283 1001 aa13.9□□□□□ -0.18
CCDC84-209ENST00000580556 MMP19Q99542 508 aa13.9□□□□□ -0.18
CCDC84-209ENST00000580556 CYP39A1Q9NYL5 469 aa13.9□□□□□ -0.18
CCDC84-209ENST00000580556 DNAJC25-GNG10A0A024R161 153 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 LOC102724159A0A0B4J2E5 919 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.89□□□□□ -0.19
CCDC84-209ENST00000580556 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.89□□□□□ -0.19
CCDC84-209ENST00000580556 GRXCR1A8MXD5 290 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 MEIS2O14770 477 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 DTNBO60941 627 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 MMP1P03956 469 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 CLTBP09497 229 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 PBX2P40425 430 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 SLC4A3P48751 1232 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 CLK2P49760 499 aaKnown RBP13.89□□□□□ -0.19
CCDC84-209ENST00000580556 NLRP5P59047 1200 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 RPS6P62753 249 aaKnown RBP13.89□□□□□ -0.19
CCDC84-209ENST00000580556 AP3B2Q13367 1082 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 PWP2Q15269 919 aaKnown RBP13.89□□□□□ -0.19
CCDC84-209ENST00000580556 C1orf53Q5VUE5 145 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 OLFML2BQ68BL8 750 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 KRT40Q6A162 431 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 REXO1Q8N1G1 1221 aaKnown RBP13.89□□□□□ -0.19
CCDC84-209ENST00000580556 ADAMTS19Q8TE59 1207 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 FAM122AQ96E09 287 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 PRDM12Q9H4Q4 367 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 BRMS1Q9HCU9 246 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 PCDHA4Q9UN74 947 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 FRMPD4Q14CM0 1322 aa13.89□□□□□ -0.19
CCDC84-209ENST00000580556 M0R2N6 131 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 KIAA0355O15063 1070 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 PQBP1O60828 265 aaKnown RBP13.88□□□□□ -0.19
CCDC84-209ENST00000580556 CFBP00751 764 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 FOSP01100 380 aaPredicted RBP13.88□□□□□ -0.19
CCDC84-209ENST00000580556 RAG1P15918 1043 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 BAATQ14032 418 aaPredicted RBP13.88□□□□□ -0.19
CCDC84-209ENST00000580556 SAFBQ15424 915 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC84-209ENST00000580556 CCDC85BQ15834 202 aaPredicted RBP13.88□□□□□ -0.19
CCDC84-209ENST00000580556 LARP1BQ659C4 914 aaKnown RBP13.88□□□□□ -0.19
CCDC84-209ENST00000580556 NSMFQ6X4W1 530 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 BLIDQ8IZY5 108 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 FAM133AQ8N9E0 248 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 SYTL5Q8TDW5 730 aaPredicted RBP13.88□□□□□ -0.19
CCDC84-209ENST00000580556 TIFAQ96CG3 184 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 NECAB3Q96P71 396 aaPredicted RBP13.88□□□□□ -0.19
CCDC84-209ENST00000580556 ASB2Q96Q27 587 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 SLC5A4Q9NY91 659 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 KCNJ14Q9UNX9 436 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 PHF24Q9UPV7 400 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 DIS3Q9Y2L1 958 aaKnown RBP13.88□□□□□ -0.19
CCDC84-209ENST00000580556 PLXNA1Q9UIW2 1896 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 MYO9BQ13459 2157 aa13.88□□□□□ -0.19
CCDC84-209ENST00000580556 PGK1P00558 417 aa13.87□□□□□ -0.19
CCDC84-209ENST00000580556 KRT2P35908 639 aa13.87□□□□□ -0.19
CCDC84-209ENST00000580556 FPGSQ05932 587 aa13.87□□□□□ -0.19
CCDC84-209ENST00000580556 ADGRE1Q14246 886 aa13.87□□□□□ -0.19
CCDC84-209ENST00000580556 SLC30A10Q6XR72 485 aa13.87□□□□□ -0.19
CCDC84-209ENST00000580556 DNERQ8NFT8 737 aa13.87□□□□□ -0.19
CCDC84-209ENST00000580556 ATXN2LQ8WWM7 1075 aaKnown RBP13.87□□□□□ -0.19
CCDC84-209ENST00000580556 LENG1Q96BZ8 264 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms