RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 COG5Q9UP83 839 aa20.87■□□□□ 0.93
MKS1-209ENST00000580127 TLL1O43897 1013 aa20.86■□□□□ 0.93
MKS1-209ENST00000580127 MMP3P08254 477 aa20.86■□□□□ 0.93
MKS1-209ENST00000580127 SELPP16109 830 aa20.86■□□□□ 0.93
MKS1-209ENST00000580127 CHD1LQ86WJ1 897 aa20.86■□□□□ 0.93
MKS1-209ENST00000580127 SAMD3Q8N6K7 520 aa20.86■□□□□ 0.93
MKS1-209ENST00000580127 DSCC1Q9BVC3 393 aa20.86■□□□□ 0.93
MKS1-209ENST00000580127 AMNQ9BXJ7 453 aa20.86■□□□□ 0.93
MKS1-209ENST00000580127 OSBPL3Q9H4L5 887 aa20.86■□□□□ 0.93
MKS1-209ENST00000580127 ZSWIM5Q9P217 1185 aa20.86■□□□□ 0.93
MKS1-209ENST00000580127 SCN5AQ14524 2016 aa20.86■□□□□ 0.93
MKS1-209ENST00000580127 NEDD4P46934 1319 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 MYH6P13533 1939 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 B4E1Z4 1266 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 EFCAB14O75071 495 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 ARIH2O95376 493 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 QRICH1Q2TAL8 776 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 SMC5Q8IY18 1101 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 DHX37Q8IY37 1157 aaKnown RBP20.85■□□□□ 0.93
MKS1-209ENST00000580127 ARNTL2Q8WYA1 636 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 TBC1D5Q92609 795 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 CPVLQ9H3G5 476 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 MTCH2Q9Y6C9 303 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 MRVI1Q9Y6F6 885 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 CHD9Q3L8U1 2897 aa20.85■□□□□ 0.93
MKS1-209ENST00000580127 CFBP00751 764 aa20.84■□□□□ 0.93
MKS1-209ENST00000580127 NR3C2P08235 984 aa20.84■□□□□ 0.93
MKS1-209ENST00000580127 COL9A1P20849 921 aa20.84■□□□□ 0.93
MKS1-209ENST00000580127 ARHGAP1Q07960 439 aa20.84■□□□□ 0.93
MKS1-209ENST00000580127 PLEKHM2Q8IWE5 1019 aa20.84■□□□□ 0.93
MKS1-209ENST00000580127 ENAHQ8N8S7 591 aaPredicted RBP20.84■□□□□ 0.93
MKS1-209ENST00000580127 EMID1Q96A84 441 aaPredicted RBP20.84■□□□□ 0.93
MKS1-209ENST00000580127 CERS4Q9HA82 394 aa20.84■□□□□ 0.93
MKS1-209ENST00000580127 DDX41Q9UJV9 622 aaKnown RBP20.84■□□□□ 0.93
MKS1-209ENST00000580127 KIAA1217Q5T5P2 1943 aa20.83■□□□□ 0.93
MKS1-209ENST00000580127 ABHD14A-ACY1A0A1B0GW23 586 aa20.83■□□□□ 0.93
MKS1-209ENST00000580127 PPFIA4O75335 1185 aa20.83■□□□□ 0.93
MKS1-209ENST00000580127 BMP1P13497 986 aa20.83■□□□□ 0.93
MKS1-209ENST00000580127 TAP1Q03518 808 aa20.83■□□□□ 0.93
MKS1-209ENST00000580127 IKBKEQ14164 716 aa20.83■□□□□ 0.93
MKS1-209ENST00000580127 IFIT1BQ5T764 474 aaKnown RBP20.83■□□□□ 0.93
MKS1-209ENST00000580127 GDF6Q6KF10 455 aaPredicted RBP20.83■□□□□ 0.93
MKS1-209ENST00000580127 CNKSR3Q6P9H4 555 aa20.83■□□□□ 0.93
MKS1-209ENST00000580127 LRRC8DQ7L1W4 858 aa20.83■□□□□ 0.93
MKS1-209ENST00000580127 PPP1R13LQ8WUF5 828 aa20.83■□□□□ 0.93
MKS1-209ENST00000580127 JMJD4Q9H9V9 463 aa20.83■□□□□ 0.93
MKS1-209ENST00000580127 PRRC2BQ5JSZ5 2229 aaKnown RBP20.82■□□□□ 0.92
MKS1-209ENST00000580127 EIF2AK2P19525 551 aaKnown RBP20.82■□□□□ 0.92
MKS1-209ENST00000580127 PSEN2P49810 448 aa20.82■□□□□ 0.92
MKS1-209ENST00000580127 NUCB1Q02818 461 aa20.82■□□□□ 0.92
MKS1-209ENST00000580127 TRDNQ13061 729 aa20.82■□□□□ 0.92
MKS1-209ENST00000580127 PTK7Q13308 1070 aa20.82■□□□□ 0.92
MKS1-209ENST00000580127 PPTC7Q8NI37 304 aa20.82■□□□□ 0.92
MKS1-209ENST00000580127 ALG1Q9BT22 464 aa20.82■□□□□ 0.92
MKS1-209ENST00000580127 C1QTNF1Q9BXJ1 281 aa20.82■□□□□ 0.92
MKS1-209ENST00000580127 PXMP2Q9NR77 195 aa20.82■□□□□ 0.92
MKS1-209ENST00000580127 LMCD1Q9NZU5 365 aa20.82■□□□□ 0.92
MKS1-209ENST00000580127 GTF2IRD1Q9UHL9 959 aa20.82■□□□□ 0.92
MKS1-209ENST00000580127 MYH7BA7E2Y1 1941 aa20.81■□□□□ 0.92
MKS1-209ENST00000580127 KLRF2D3W0D1 207 aa20.81■□□□□ 0.92
MKS1-209ENST00000580127 RFXAPO00287 272 aa20.81■□□□□ 0.92
MKS1-209ENST00000580127 TGFB3P10600 412 aa20.81■□□□□ 0.92
MKS1-209ENST00000580127 KAT2BQ92831 832 aa20.81■□□□□ 0.92
MKS1-209ENST00000580127 HLA-CQ95604 372 aa20.81■□□□□ 0.92
MKS1-209ENST00000580127 COL20A1Q9P218 1284 aa20.81■□□□□ 0.92
MKS1-209ENST00000580127 HDAC6Q9UBN7 1215 aa20.81■□□□□ 0.92
MKS1-209ENST00000580127 PCDHA1Q9Y5I3 950 aa20.81■□□□□ 0.92
MKS1-209ENST00000580127 TCF20Q9UGU0 1960 aaKnown RBP20.8■□□□□ 0.92
MKS1-209ENST00000580127 CKBP12277 381 aa20.8■□□□□ 0.92
MKS1-209ENST00000580127 MYCLP12524 364 aaPredicted RBP20.8■□□□□ 0.92
MKS1-209ENST00000580127 RBL2Q08999 1139 aa20.8■□□□□ 0.92
MKS1-209ENST00000580127 MFSD10Q14728 455 aa20.8■□□□□ 0.92
MKS1-209ENST00000580127 KIAA0753Q2KHM9 967 aa20.8■□□□□ 0.92
MKS1-209ENST00000580127 RAD9AQ99638 391 aa20.8■□□□□ 0.92
MKS1-209ENST00000580127 TET1Q8NFU7 2136 aa20.8■□□□□ 0.92
MKS1-209ENST00000580127 ERICH2A1L162 156 aa20.79■□□□□ 0.92
MKS1-209ENST00000580127 ZBTB5O15062 677 aa20.79■□□□□ 0.92
MKS1-209ENST00000580127 HSD17B4P51659 736 aa20.79■□□□□ 0.92
MKS1-209ENST00000580127 WDR5P61964 334 aaKnown RBP20.79■□□□□ 0.92
MKS1-209ENST00000580127 TFF2Q03403 129 aa20.79■□□□□ 0.92
MKS1-209ENST00000580127 BDP1A6H8Y1 2624 aa20.79■□□□□ 0.92
MKS1-209ENST00000580127 EMSYQ7Z589 1322 aa20.78■□□□□ 0.92
MKS1-209ENST00000580127 TANC1Q9C0D5 1861 aa20.78■□□□□ 0.92
MKS1-209ENST00000580127 CXCL10P02778 98 aa20.78■□□□□ 0.92
MKS1-209ENST00000580127 STOX1Q6ZVD7 989 aa20.78■□□□□ 0.92
MKS1-209ENST00000580127 SPATA33Q96N06 139 aa20.78■□□□□ 0.92
MKS1-209ENST00000580127 MLXIPQ9HAP2 919 aa20.78■□□□□ 0.92
MKS1-209ENST00000580127 GCOM1H8Y6P7 765 aaPredicted RBP20.77■□□□□ 0.92
MKS1-209ENST00000580127 F2P00734 622 aa20.77■□□□□ 0.92
MKS1-209ENST00000580127 POLR2MP0CAP2 368 aa20.77■□□□□ 0.92
MKS1-209ENST00000580127 CCND2P30279 289 aa20.77■□□□□ 0.92
MKS1-209ENST00000580127 GRB10Q13322 594 aa20.77■□□□□ 0.92
MKS1-209ENST00000580127 CELF3Q5SZQ8 465 aaKnown RBP20.77■□□□□ 0.92
MKS1-209ENST00000580127 MYSM1Q5VVJ2 828 aa20.77■□□□□ 0.92
MKS1-209ENST00000580127 VSIG10LQ86VR7 867 aa20.77■□□□□ 0.92
MKS1-209ENST00000580127 RUFY2Q8WXA3 655 aa20.77■□□□□ 0.92
MKS1-209ENST00000580127 PDCD2LQ9BRP1 358 aa20.77■□□□□ 0.92
MKS1-209ENST00000580127 HAS3O00219 553 aa20.76■□□□□ 0.91
MKS1-209ENST00000580127 GHRHRQ02643 423 aa20.76■□□□□ 0.91
MKS1-209ENST00000580127 SART3Q15020 963 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms