RNA–Protein interactions for RNA: ENST00000577052.5

ABR-236, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-236ENST00000577052 PWP2Q15269 919 aaKnown RBP20.04■□□□□ 0.8
ABR-236ENST00000577052 RNF207Q6ZRF8 634 aa20.04■□□□□ 0.8
ABR-236ENST00000577052 NCOA7Q8NI08 942 aa20.04■□□□□ 0.8
ABR-236ENST00000577052 TBC1D5Q92609 795 aa20.04■□□□□ 0.8
ABR-236ENST00000577052 IPO9Q96P70 1041 aaKnown RBP20.04■□□□□ 0.8
ABR-236ENST00000577052 NECAB3Q96P71 396 aaPredicted RBP20.04■□□□□ 0.8
ABR-236ENST00000577052 TOMM22Q9NS69 142 aa20.04■□□□□ 0.8
ABR-236ENST00000577052 TRANK1O15050 2925 aa20.03■□□□□ 0.8
ABR-236ENST00000577052 A6NJR5 290 aa20.03■□□□□ 0.8
ABR-236ENST00000577052 CA3P07451 260 aa20.03■□□□□ 0.8
ABR-236ENST00000577052 HMGB1P09429 215 aaKnown RBP20.03■□□□□ 0.8
ABR-236ENST00000577052 COL9A1P20849 921 aa20.03■□□□□ 0.8
ABR-236ENST00000577052 EXOSC10Q01780 885 aaKnown RBP20.03■□□□□ 0.8
ABR-236ENST00000577052 TFF2Q03403 129 aa20.03■□□□□ 0.8
ABR-236ENST00000577052 GPNMBQ14956 572 aa20.03■□□□□ 0.8
ABR-236ENST00000577052 KRT40Q6A162 431 aa20.03■□□□□ 0.8
ABR-236ENST00000577052 SPRED2Q7Z698 418 aa20.03■□□□□ 0.8
ABR-236ENST00000577052 HSCBQ8IWL3 235 aa20.03■□□□□ 0.8
ABR-236ENST00000577052 IL27Q8NEV9 243 aa20.03■□□□□ 0.8
ABR-236ENST00000577052 PDRG1Q9NUG6 133 aa20.03■□□□□ 0.8
ABR-236ENST00000577052 B4E1Z4 1266 aa20.02■□□□□ 0.8
ABR-236ENST00000577052 IQCF3P0C7M6 154 aa20.02■□□□□ 0.8
ABR-236ENST00000577052 SUPT20HL2P0C7V6 817 aa20.02■□□□□ 0.8
ABR-236ENST00000577052 GOLGA8HP0CJ92 632 aa20.02■□□□□ 0.8
ABR-236ENST00000577052 BMP1P13497 986 aa20.02■□□□□ 0.8
ABR-236ENST00000577052 CPT1AP50416 773 aa20.02■□□□□ 0.8
ABR-236ENST00000577052 AK2P54819 239 aa20.02■□□□□ 0.8
ABR-236ENST00000577052 ANTXR2P58335 489 aa20.02■□□□□ 0.8
ABR-236ENST00000577052 BECN1Q14457 450 aa20.02■□□□□ 0.8
ABR-236ENST00000577052 MFSD6Q6ZSS7 791 aa20.02■□□□□ 0.8
ABR-236ENST00000577052 DHX32Q7L7V1 743 aaKnown RBP20.02■□□□□ 0.8
ABR-236ENST00000577052 RALYLQ86SE5 291 aaKnown RBP20.02■□□□□ 0.8
ABR-236ENST00000577052 RNF41Q9H4P4 317 aaPredicted RBP20.02■□□□□ 0.8
ABR-236ENST00000577052 CERS4Q9HA82 394 aa20.02■□□□□ 0.8
ABR-236ENST00000577052 WDR19Q8NEZ3 1342 aa20.02■□□□□ 0.79
ABR-236ENST00000577052 PFKMP08237 780 aa20.01■□□□□ 0.79
ABR-236ENST00000577052 PPP2R5BQ15173 497 aa20.01■□□□□ 0.79
ABR-236ENST00000577052 NFRKBQ6P4R8 1299 aa20.01■□□□□ 0.79
ABR-236ENST00000577052 CCDC62Q6P9F0 684 aa20.01■□□□□ 0.79
ABR-236ENST00000577052 MICALL1Q8N3F8 863 aa20.01■□□□□ 0.79
ABR-236ENST00000577052 UHRF1Q96T88 793 aaPredicted RBP20.01■□□□□ 0.79
ABR-236ENST00000577052 ZKSCAN3Q9BRR0 538 aa20.01■□□□□ 0.79
ABR-236ENST00000577052 UBA5Q9GZZ9 404 aa20.01■□□□□ 0.79
ABR-236ENST00000577052 COL20A1Q9P218 1284 aa20.01■□□□□ 0.79
ABR-236ENST00000577052 MTCH2Q9Y6C9 303 aa20.01■□□□□ 0.79
ABR-236ENST00000577052 BDP1A6H8Y1 2624 aa20.01■□□□□ 0.79
ABR-236ENST00000577052 K7ELQ4 463 aaPredicted RBP20■□□□□ 0.79
ABR-236ENST00000577052 PCP11498 1178 aaKnown RBP20■□□□□ 0.79
ABR-236ENST00000577052 POU3F3P20264 500 aaPredicted RBP20■□□□□ 0.79
ABR-236ENST00000577052 PDE4DQ08499 809 aa20■□□□□ 0.79
ABR-236ENST00000577052 TRDNQ13061 729 aa20■□□□□ 0.79
ABR-236ENST00000577052 TOB2Q14106 344 aaPredicted RBP20■□□□□ 0.79
ABR-236ENST00000577052 FAM47CQ5HY64 1035 aa20■□□□□ 0.79
ABR-236ENST00000577052 CYB5R4Q7L1T6 521 aa20■□□□□ 0.79
ABR-236ENST00000577052 DNERQ8NFT8 737 aa20■□□□□ 0.79
ABR-236ENST00000577052 SCFD2Q8WU76 684 aa20■□□□□ 0.79
ABR-236ENST00000577052 LRRC2Q9BYS8 371 aa20■□□□□ 0.79
ABR-236ENST00000577052 KRT23Q9C075 422 aa20■□□□□ 0.79
ABR-236ENST00000577052 CNNM2Q9H8M5 875 aa20■□□□□ 0.79
ABR-236ENST00000577052 NKRFO15226 690 aaKnown RBP eCLIP19.99■□□□□ 0.79
ABR-236ENST00000577052 PRC1O43663 620 aa19.99■□□□□ 0.79
ABR-236ENST00000577052 TXNP10599 105 aaKnown RBP19.99■□□□□ 0.79
ABR-236ENST00000577052 KCNQ1P51787 676 aa19.99■□□□□ 0.79
ABR-236ENST00000577052 TAP1Q03518 808 aa19.99■□□□□ 0.79
ABR-236ENST00000577052 TCTN1Q2MV58 587 aa19.99■□□□□ 0.79
ABR-236ENST00000577052 USH1GQ495M9 461 aa19.99■□□□□ 0.79
ABR-236ENST00000577052 TMEM67Q5HYA8 995 aa19.99■□□□□ 0.79
ABR-236ENST00000577052 Q6ZUG5 572 aa19.99■□□□□ 0.79
ABR-236ENST00000577052 CHST3Q7LGC8 479 aa19.99■□□□□ 0.79
ABR-236ENST00000577052 DHX38Q92620 1227 aaKnown RBP19.99■□□□□ 0.79
ABR-236ENST00000577052 KAT2BQ92831 832 aa19.99■□□□□ 0.79
ABR-236ENST00000577052 KIAA1217Q5T5P2 1943 aa19.98■□□□□ 0.79
ABR-236ENST00000577052 PITPNM1O00562 1244 aa19.98■□□□□ 0.79
ABR-236ENST00000577052 KDM4AO75164 1064 aa19.98■□□□□ 0.79
ABR-236ENST00000577052 MCM5P33992 734 aa19.98■□□□□ 0.79
ABR-236ENST00000577052 MCM2P49736 904 aa19.98■□□□□ 0.79
ABR-236ENST00000577052 TMCO2Q7Z6W1 182 aaPredicted RBP19.98■□□□□ 0.79
ABR-236ENST00000577052 AFG1LQ8WV93 481 aa19.98■□□□□ 0.79
ABR-236ENST00000577052 TAAR1Q96RJ0 339 aa19.98■□□□□ 0.79
ABR-236ENST00000577052 AGXT2Q9BYV1 514 aa19.98■□□□□ 0.79
ABR-236ENST00000577052 GPHNQ9NQX3 736 aaPredicted RBP19.98■□□□□ 0.79
ABR-236ENST00000577052 LPXNO60711 386 aa19.97■□□□□ 0.79
ABR-236ENST00000577052 RFC2P35250 354 aa19.97■□□□□ 0.79
ABR-236ENST00000577052 PTPN11Q06124 597 aaPredicted RBP19.97■□□□□ 0.79
ABR-236ENST00000577052 ARHGAP1Q07960 439 aa19.97■□□□□ 0.79
ABR-236ENST00000577052 LY6KQ17RY6 165 aa19.97■□□□□ 0.79
ABR-236ENST00000577052 GDF6Q6KF10 455 aaPredicted RBP19.97■□□□□ 0.79
ABR-236ENST00000577052 HERC6Q8IVU3 1022 aa19.97■□□□□ 0.79
ABR-236ENST00000577052 RGS22Q8NE09 1264 aa19.97■□□□□ 0.79
ABR-236ENST00000577052 SYTL5Q8TDW5 730 aaPredicted RBP19.97■□□□□ 0.79
ABR-236ENST00000577052 SLC9A7Q96T83 725 aa19.97■□□□□ 0.79
ABR-236ENST00000577052 COL4A4P53420 1690 aaPredicted RBP19.97■□□□□ 0.79
ABR-236ENST00000577052 MMP3P08254 477 aa19.96■□□□□ 0.79
ABR-236ENST00000577052 FBXL16Q8N461 479 aa19.96■□□□□ 0.79
ABR-236ENST00000577052 PHOSPHO2Q8TCD6 241 aa19.96■□□□□ 0.79
ABR-236ENST00000577052 ESR2Q92731 530 aa19.96■□□□□ 0.79
ABR-236ENST00000577052 LARP6Q9BRS8 491 aaKnown RBP19.96■□□□□ 0.79
ABR-236ENST00000577052 ZSWIM5Q9P217 1185 aa19.96■□□□□ 0.79
ABR-236ENST00000577052 LCHNA4D1U4 455 aa19.95■□□□□ 0.78
ABR-236ENST00000577052 SH2B2O14492 632 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms