RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 CYTH3O43739 400 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 CHRNA5P30532 468 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 WDR93Q6P2C0 686 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 OR8K1Q8NGG5 319 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 GSDMAQ96QA5 445 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 CEP89Q96ST8 783 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 DISC1Q9NRI5 854 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 PCDHA6Q9UN73 950 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 PCDHA8Q9Y5H6 950 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 CNTNAP5Q8WYK1 1306 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 GOLGA6CA6NDK9 693 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 ZEB2O60315 1214 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 DDAH1O94760 285 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 FAM153BP0C7A2 387 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 GOLGA6DP0CG33 693 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 GNGT1P63211 74 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 MKRN4PQ13434 485 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-215ENST00000575112 GRAPQ13588 217 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 FAM153CQ494X1 144 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 TMTC1Q8IUR5 882 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 GRAPLQ8TC17 118 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-215ENST00000575112 CDCA7Q9BWT1 371 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-215ENST00000575112 TDRD3Q9H7E2 651 aaKnown RBP9.44□□□□□ -0.9
RPAIN-215ENST00000575112 PSTPIP2Q9H939 334 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 GOLGA6AQ9NYA3 693 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 FAM153AQ9UHL3 310 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 PCDHA12Q9UN75 941 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 PACSIN2Q9UNF0 486 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-215ENST00000575112 PNPLA7Q6ZV29 1317 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 SEC24CP53992 1094 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 AMPD3Q01432 767 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 CCNI2Q6ZMN8 369 aaPredicted RBP9.43□□□□□ -0.9
RPAIN-215ENST00000575112 TPH2Q8IWU9 490 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 GOLPH3Q9H4A6 298 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 CHD4Q14839 1912 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 MOCS3O95396 460 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 MMP10P09238 476 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 RASA1P20936 1047 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 HNRNPH1P31943 449 aaKnown RBP9.43□□□□□ -0.9
RPAIN-215ENST00000575112 GUCY1A3Q02108 690 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 RASSF7Q02833 373 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 SPRED3Q2MJR0 410 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 NAA35Q5VZE5 725 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 ANKRD40Q6AI12 368 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 CCDC70Q6NSX1 233 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 PIGOQ8TEQ8 1089 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 PPM1EQ8WY54 764 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 FAM212AQ96EL1 285 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 NUDT12Q9BQG2 462 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 POLLQ9UGP5 575 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 SF3B3Q15393 1217 aaKnown RBP9.43□□□□□ -0.9
RPAIN-215ENST00000575112 PDXDC2PQ6P474 469 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 CLEC4GQ6UXB4 293 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 ZFPM1Q8IX07 1006 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 KLHL7Q8IXQ5 586 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 TSG101Q99816 390 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 NAA15Q9BXJ9 866 aaKnown RBP9.43□□□□□ -0.9
RPAIN-215ENST00000575112 CD248Q9HCU0 757 aa9.43□□□□□ -0.9
RPAIN-215ENST00000575112 BAZ2AQ9UIF9 1905 aaKnown RBP9.43□□□□□ -0.9
RPAIN-215ENST00000575112 USP54Q70EL1 1684 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 GOLGA6BA6NDN3 693 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 SMIM23A6NLE4 172 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 ERLIN2O94905 339 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 AARSP49588 968 aaKnown RBP eCLIP9.42□□□□□ -0.9
RPAIN-215ENST00000575112 POLR2FP61218 127 aaKnown RBP9.42□□□□□ -0.9
RPAIN-215ENST00000575112 SPAG1Q07617 926 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 SEPT2Q15019 361 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 RAB34Q9BZG1 259 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 HYOU1Q9Y4L1 999 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 TNS2Q63HR2 1409 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 SPDYE3A6NKU9 549 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 CYLC1P35663 651 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-215ENST00000575112 ATP2C1P98194 919 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-215ENST00000575112 RCSD1Q6JBY9 416 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 GPBP1Q86WP2 473 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 TRIML1Q8N9V2 468 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 MED4Q9NPJ6 270 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 LIMA1Q9UHB6 759 aaKnown RBP9.42□□□□□ -0.9
RPAIN-215ENST00000575112 DDX25Q9UHL0 483 aaKnown RBP9.42□□□□□ -0.9
RPAIN-215ENST00000575112 ATP2C2O75185 946 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 MAGEA1P43355 309 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 MNAT1P51948 309 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 PHLDB2Q86SQ0 1253 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 CREG2Q8IUH2 290 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 KIRREL3Q8IZU9 778 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 FAM76AQ8TAV0 307 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 ELMO3Q96BJ8 720 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 NHEJ1Q9H9Q4 299 aaPredicted RBP9.42□□□□□ -0.9
RPAIN-215ENST00000575112 LRRC4CQ9HCJ2 640 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 LRRC4BQ9NT99 713 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 MKRN1Q9UHC7 482 aaKnown RBP9.42□□□□□ -0.9
RPAIN-215ENST00000575112 SERPINB13Q9UIV8 391 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 ADAMTS7Q9UKP4 1686 aa9.42□□□□□ -0.9
RPAIN-215ENST00000575112 STK36Q9NRP7 1315 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 POTEB3A0JP26 581 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 POTECB2RU33 542 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 PSMD14O00487 310 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 FTCDO95954 541 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 FECHP22830 423 aa9.41□□□□□ -0.9
RPAIN-215ENST00000575112 GUCY2FP51841 1108 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms