RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 EIF3JO75822 258 aaKnown RBP19.47■□□□□ 0.71
NUP88-210ENST00000574867 KIAA1217Q5T5P2 1943 aa19.47■□□□□ 0.71
NUP88-210ENST00000574867 KIF28PB7ZC32 967 aa19.47■□□□□ 0.71
NUP88-210ENST00000574867 USP11P51784 963 aa19.47■□□□□ 0.71
NUP88-210ENST00000574867 INF2Q27J81 1249 aa19.47■□□□□ 0.71
NUP88-210ENST00000574867 NEK8Q86SG6 692 aa19.47■□□□□ 0.71
NUP88-210ENST00000574867 MTMR6Q9Y217 621 aa19.47■□□□□ 0.71
NUP88-210ENST00000574867 INHAP05111 366 aa19.46■□□□□ 0.71
NUP88-210ENST00000574867 MRPS9P82933 396 aaKnown RBP19.46■□□□□ 0.71
NUP88-210ENST00000574867 GNPTABQ3T906 1256 aa19.46■□□□□ 0.71
NUP88-210ENST00000574867 MAP3K21Q5TCX8 1036 aa19.46■□□□□ 0.71
NUP88-210ENST00000574867 BRAPQ7Z569 592 aa19.46■□□□□ 0.71
NUP88-210ENST00000574867 NAP1L4Q99733 375 aaKnown RBP19.46■□□□□ 0.71
NUP88-210ENST00000574867 KATNBL1Q9H079 304 aa19.46■□□□□ 0.71
NUP88-210ENST00000574867 DDX49Q9Y6V7 483 aaKnown RBP19.46■□□□□ 0.71
NUP88-210ENST00000574867 CYBAP13498 195 aa19.45■□□□□ 0.7
NUP88-210ENST00000574867 PRKAR2AP13861 404 aaKnown RBP19.45■□□□□ 0.7
NUP88-210ENST00000574867 EARS2Q5JPH6 523 aaKnown RBP19.45■□□□□ 0.7
NUP88-210ENST00000574867 INPP4AQ96PE3 977 aaPredicted RBP19.45■□□□□ 0.7
NUP88-210ENST00000574867 ACVR2BQ13705 512 aa19.45■□□□□ 0.7
NUP88-210ENST00000574867 MOXD1Q6UVY6 613 aa19.45■□□□□ 0.7
NUP88-210ENST00000574867 FBXO16Q8IX29 292 aaPredicted RBP19.45■□□□□ 0.7
NUP88-210ENST00000574867 ZHX1Q9UKY1 873 aaPredicted RBP19.45■□□□□ 0.7
NUP88-210ENST00000574867 NOL7Q9UMY1 257 aaKnown RBP19.45■□□□□ 0.7
NUP88-210ENST00000574867 FAM205CA6NFA0 338 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 CIITAP33076 1130 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 ZNF76P36508 570 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 TRAPPC10P48553 1259 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 CACNB2Q08289 660 aaPredicted RBP19.44■□□□□ 0.7
NUP88-210ENST00000574867 CEP55Q53EZ4 464 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 NIPA1Q7RTP0 329 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 NLRX1Q86UT6 975 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 SH3TC2Q8TF17 1288 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 IPO9Q96P70 1041 aaKnown RBP19.44■□□□□ 0.7
NUP88-210ENST00000574867 UBIAD1Q9Y5Z9 338 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 GCFC2P16383 781 aaKnown RBP19.44■□□□□ 0.7
NUP88-210ENST00000574867 TRIM32Q13049 653 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 EEPD1Q7L9B9 569 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 GPRASP2Q96D09 838 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 CDHR1Q96JP9 859 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 MXRA8Q9BRK3 442 aa19.44■□□□□ 0.7
NUP88-210ENST00000574867 ZSCAN16Q9H4T2 348 aaPredicted RBP19.44■□□□□ 0.7
NUP88-210ENST00000574867 ZNF865P0CJ78 1059 aaPredicted RBP19.43■□□□□ 0.7
NUP88-210ENST00000574867 HTTP42858 3142 aa19.43■□□□□ 0.7
NUP88-210ENST00000574867 SETQ01105 290 aaPredicted RBP19.43■□□□□ 0.7
NUP88-210ENST00000574867 KCNV1Q6PIU1 500 aa19.43■□□□□ 0.7
NUP88-210ENST00000574867 SCFD2Q8WU76 684 aa19.43■□□□□ 0.7
NUP88-210ENST00000574867 FIBPO43427 364 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 ZSCAN22P10073 491 aaPredicted RBP19.42■□□□□ 0.7
NUP88-210ENST00000574867 ITGB5P18084 799 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 LETM2Q2VYF4 491 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 PPP4R3AQ6IN85 833 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 FERMT3Q86UX7 667 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 ARMC5Q96C12 935 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 MCOLN1Q9GZU1 580 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 JADE2Q9NQC1 790 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 RTEL1Q9NZ71 1219 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 CYP3A7-CYP3A51PA0A087WV96 503 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 RBM47A0AV96 593 aaKnown RBP19.42■□□□□ 0.7
NUP88-210ENST00000574867 MAFGO15525 162 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 RGS20O76081 388 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 CYP3A7P24462 503 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 ICAM3P32942 547 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 DDIT3P35638 169 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 RESTQ13127 1097 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 ORC2Q13416 577 aaPredicted RBP19.42■□□□□ 0.7
NUP88-210ENST00000574867 MTMR1Q13613 665 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 RILPL1Q5EBL4 403 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 TAPT1Q6NXT6 567 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 SEPT14Q6ZU15 432 aa19.42■□□□□ 0.7
NUP88-210ENST00000574867 IGLV3-22A0A075B6J6 115 aa19.41■□□□□ 0.7
NUP88-210ENST00000574867 FAM86B1E9PN63 330 aa19.41■□□□□ 0.7
NUP88-210ENST00000574867 MEIS1O00470 390 aa19.41■□□□□ 0.7
NUP88-210ENST00000574867 FAM86B2P0C5J1 330 aa19.41■□□□□ 0.7
NUP88-210ENST00000574867 AKR1A1P14550 325 aa19.41■□□□□ 0.7
NUP88-210ENST00000574867 TTLL4Q14679 1199 aa19.41■□□□□ 0.7
NUP88-210ENST00000574867 PRAMEF19Q5SWL8 479 aa19.41■□□□□ 0.7
NUP88-210ENST00000574867 TRPV1Q8NER1 839 aa19.41■□□□□ 0.7
NUP88-210ENST00000574867 MBOAT7Q96N66 472 aa19.41■□□□□ 0.7
NUP88-210ENST00000574867 HMX1Q9NP08 348 aaPredicted RBP19.41■□□□□ 0.7
NUP88-210ENST00000574867 FAM184BQ9ULE4 1060 aa19.41■□□□□ 0.7
NUP88-210ENST00000574867 MRVI1Q9Y6F6 885 aa19.41■□□□□ 0.7
NUP88-210ENST00000574867 MYH15Q9Y2K3 1946 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 SEPT4O43236 478 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 EDIL3O43854 480 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 CCNT1O60563 726 aaKnown RBP19.4■□□□□ 0.7
NUP88-210ENST00000574867 TGFB3P10600 412 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 PKP1Q13835 747 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 CCDC144BQ3MJ40 725 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 Q4G0T1 1027 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 ZFP91Q96JP5 570 aaPredicted RBP19.4■□□□□ 0.7
NUP88-210ENST00000574867 TDP2O95551 362 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 BRD1O95696 1058 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 F13A1P00488 732 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 NUCB2P80303 420 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 MYSM1Q5VVJ2 828 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 IQSEC1Q6DN90 963 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 PLA2G4DQ86XP0 818 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 ZNF333Q96JL9 665 aa19.4■□□□□ 0.7
NUP88-210ENST00000574867 WDR11Q9BZH6 1224 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms