RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 EPHB3P54753 998 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 LINC00310P59036 64 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 WWC2Q6AWC2 1192 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 C1QL4Q86Z23 238 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 RIOX2Q8IUF8 465 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 RCBTB1Q8NDN9 531 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 MKL1Q969V6 931 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 PEX11GQ96HA9 241 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 SIGLEC10Q96LC7 697 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 SPATA9Q9BWV2 254 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 NUDT5Q9UKK9 219 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 X6R8D5 127 aa6.17□□□□□ -1.42
NUP88-202ENST00000570937 SYNJ1O43426 1573 aa6.16□□□□□ -1.42
NUP88-202ENST00000570937 TRAV20A0A0B4J274 112 aa6.16□□□□□ -1.42
NUP88-202ENST00000570937 PRR5P85299 388 aa6.16□□□□□ -1.42
NUP88-202ENST00000570937 ZNF200P98182 395 aaPredicted RBP6.16□□□□□ -1.42
NUP88-202ENST00000570937 RASA3Q14644 834 aa6.16□□□□□ -1.42
NUP88-202ENST00000570937 SLC9A5Q14940 896 aa6.16□□□□□ -1.42
NUP88-202ENST00000570937 RSPO2Q6UXX9 243 aaPredicted RBP6.16□□□□□ -1.42
NUP88-202ENST00000570937 SPATC1Q76KD6 591 aa6.16□□□□□ -1.42
NUP88-202ENST00000570937 NPM2Q86SE8 214 aaKnown RBP6.16□□□□□ -1.42
NUP88-202ENST00000570937 IGDCC3Q8IVU1 814 aa6.16□□□□□ -1.42
NUP88-202ENST00000570937 USP33Q8TEY7 942 aa6.16□□□□□ -1.42
NUP88-202ENST00000570937 OSBP2Q969R2 916 aa6.16□□□□□ -1.42
NUP88-202ENST00000570937 MARCH2Q9P0N8 246 aa6.16□□□□□ -1.42
NUP88-202ENST00000570937 CNOT6Q9ULM6 557 aaKnown RBP6.16□□□□□ -1.42
NUP88-202ENST00000570937 HCFC2Q9Y5Z7 792 aa6.16□□□□□ -1.42
NUP88-202ENST00000570937 SNAPC4Q5SXM2 1469 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 C22orf46C9J442 243 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 H7BY64 318 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 MYO1BO43795 1136 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 ADCY3O60266 1144 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 ZBTB7AO95365 584 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 NTRK1P04629 796 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 PABPC1P11940 636 aaKnown RBP6.15□□□□□ -1.42
NUP88-202ENST00000570937 IGFBP6P24592 240 aaPredicted RBP6.15□□□□□ -1.42
NUP88-202ENST00000570937 SLC6A11P48066 632 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 TARBP2Q15633 366 aaKnown RBP6.15□□□□□ -1.42
NUP88-202ENST00000570937 MTERF2Q49AM1 385 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 MROH9Q5TGP6 573 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 NLRP10Q86W26 655 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 AMIGO3Q86WK7 504 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 DCP2Q8IU60 420 aaKnown RBP6.15□□□□□ -1.42
NUP88-202ENST00000570937 TEX2Q8IWB9 1127 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 LRRC56Q8IYG6 542 aaPredicted RBP6.15□□□□□ -1.42
NUP88-202ENST00000570937 ZSCAN18Q8TBC5 510 aaPredicted RBP6.15□□□□□ -1.42
NUP88-202ENST00000570937 RNF38Q9H0F5 515 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 GPR27Q9NS67 375 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 DBR1Q9UK59 544 aaKnown RBP6.15□□□□□ -1.42
NUP88-202ENST00000570937 IRAK3Q9Y616 596 aa6.15□□□□□ -1.42
NUP88-202ENST00000570937 KIF27Q86VH2 1401 aa6.15□□□□□ -1.43
NUP88-202ENST00000570937 SYNJ2O15056 1496 aa6.15□□□□□ -1.43
NUP88-202ENST00000570937 PRODHO43272 600 aa6.14□□□□□ -1.43
NUP88-202ENST00000570937 LCP1P13796 627 aa6.14□□□□□ -1.43
NUP88-202ENST00000570937 BCL6P41182 706 aa6.14□□□□□ -1.43
NUP88-202ENST00000570937 LSAMPQ13449 338 aa6.14□□□□□ -1.43
NUP88-202ENST00000570937 SSPNQ14714 243 aa6.14□□□□□ -1.43
NUP88-202ENST00000570937 ZNF385BQ569K4 471 aa6.14□□□□□ -1.43
NUP88-202ENST00000570937 NSMFQ6X4W1 530 aa6.14□□□□□ -1.43
NUP88-202ENST00000570937 SIAH1Q8IUQ4 282 aa6.14□□□□□ -1.43
NUP88-202ENST00000570937 TMEFF1Q8IYR6 380 aa6.14□□□□□ -1.43
NUP88-202ENST00000570937 DEPDC7Q96QD5 511 aa6.14□□□□□ -1.43
NUP88-202ENST00000570937 EPB41L4AQ9HCS5 686 aaPredicted RBP6.14□□□□□ -1.43
NUP88-202ENST00000570937 FBXL7Q9UJT9 491 aa6.14□□□□□ -1.43
NUP88-202ENST00000570937 KCTD3Q9Y597 815 aa6.14□□□□□ -1.43
NUP88-202ENST00000570937 RFXAPO00287 272 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 BUB1BO60566 1050 aaPredicted RBP6.13□□□□□ -1.43
NUP88-202ENST00000570937 PFKLP17858 780 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 FPR2P25090 351 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 SSRP1Q08945 709 aaKnown RBP6.13□□□□□ -1.43
NUP88-202ENST00000570937 NTRK3Q16288 839 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 LONRF2Q1L5Z9 754 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 CIAPIN1Q6FI81 312 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 CEP68Q76N32 757 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 ZBTB38Q8NAP3 1195 aaPredicted RBP6.13□□□□□ -1.43
NUP88-202ENST00000570937 DCAF4Q8WV16 495 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 SEC14L1Q92503 715 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 TRMT2BQ96GJ1 504 aaKnown RBP6.13□□□□□ -1.43
NUP88-202ENST00000570937 TMEM169Q96HH4 297 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 ZFYVE21Q9BQ24 234 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 RXFP1Q9HBX9 757 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 SNTG2Q9NY99 539 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 PLA2G2DQ9UNK4 145 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 PCDHA2Q9Y5H9 948 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 FHAD1B1AJZ9 1412 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 ERICH3Q5RHP9 1530 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 ABCA5Q8WWZ7 1642 aa6.13□□□□□ -1.43
NUP88-202ENST00000570937 FAM221BA6H8Z2 402 aa6.12□□□□□ -1.43
NUP88-202ENST00000570937 CCDC85CA6NKD9 419 aa6.12□□□□□ -1.43
NUP88-202ENST00000570937 NUAK1O60285 661 aa6.12□□□□□ -1.43
NUP88-202ENST00000570937 ASGR2P07307 311 aa6.12□□□□□ -1.43
NUP88-202ENST00000570937 NCAM1P13591 858 aa6.12□□□□□ -1.43
NUP88-202ENST00000570937 PI3P19957 117 aa6.12□□□□□ -1.43
NUP88-202ENST00000570937 NCKAP1LP55160 1127 aa6.12□□□□□ -1.43
NUP88-202ENST00000570937 CAP1Q01518 475 aa6.12□□□□□ -1.43
NUP88-202ENST00000570937 YOD1Q5VVQ6 348 aaPredicted RBP6.12□□□□□ -1.43
NUP88-202ENST00000570937 USP53Q70EK8 1073 aa6.12□□□□□ -1.43
NUP88-202ENST00000570937 FAM129CQ86XR2 697 aa6.12□□□□□ -1.43
NUP88-202ENST00000570937 SCUBE1Q8IWY4 988 aa6.12□□□□□ -1.43
NUP88-202ENST00000570937 CPA5Q8WXQ8 436 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms