RNA–Protein interactions for RNA: ENST00000570749.5

TRIM25-204, Transcript of tripartite motif containing 25, human

TSL 2

Gene TRIM25, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM25-204	ENST00000570749	XRRA1	Q6P2D8	792 aa		11.22	□□□□□ -0.61
TRIM25-204	ENST00000570749	HOMER1	Q86YM7	354 aa		11.22	□□□□□ -0.61
TRIM25-204	ENST00000570749	CUL9	Q8IWT3	2517 aa		11.22	□□□□□ -0.61
TRIM25-204	ENST00000570749	ZNF654	Q8IZM8	581 aa		11.22	□□□□□ -0.61
TRIM25-204	ENST00000570749	PPTC7	Q8NI37	304 aa		11.22	□□□□□ -0.61
TRIM25-204	ENST00000570749	CAGE1	Q8TC20	777 aa		11.22	□□□□□ -0.61
TRIM25-204	ENST00000570749	IGDCC4	Q8TDY8	1250 aa		11.22	□□□□□ -0.61
TRIM25-204	ENST00000570749	RRP36	Q96EU6	259 aa	Known RBP	11.22	□□□□□ -0.61
TRIM25-204	ENST00000570749	SEMA6B	Q9H3T3	888 aa		11.22	□□□□□ -0.61
TRIM25-204	ENST00000570749	COL20A1	Q9P218	1284 aa		11.22	□□□□□ -0.61
TRIM25-204	ENST00000570749	NOD1	Q9Y239	953 aa		11.22	□□□□□ -0.61
TRIM25-204	ENST00000570749	TRANK1	O15050	2925 aa		11.22	□□□□□ -0.61
TRIM25-204	ENST00000570749	GBF1	Q92538	1859 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	FRMPD4	Q14CM0	1322 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	CCDC69	A6NI79	296 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	OPLAH	O14841	1288 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	PRC1	O43663	620 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	DNAJB2	P25686	324 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	CYP2C18	P33260	490 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	PSMC6	P62333	389 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	ARHGAP1	Q07960	439 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	NBPF20	Q3BBV1	942 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	FAM47C	Q5HY64	1035 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	SEPT14	Q6ZU15	432 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	VSIG10L	Q86VR7	867 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	RETREG2	Q8NC44	543 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	CUL5	Q93034	780 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	GUCD1	Q96NT3	240 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	PIGS	Q96S52	555 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	LSG1	Q9H089	658 aa	Known RBP	11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	TRPV6	Q9H1D0	765 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	LY9	Q9HBG7	655 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	ANO2	Q9NQ90	1003 aa		11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	DDX41	Q9UJV9	622 aa	Known RBP	11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	DDX49	Q9Y6V7	483 aa	Known RBP	11.21	□□□□□ -0.61
TRIM25-204	ENST00000570749	TRIP12	Q14669	1992 aa	Predicted RBP	11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	PIK3CD	O00329	1044 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	PPP1R11	O60927	126 aa	Predicted RBP	11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	PPFIA4	O75335	1185 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	ARIH2	O95376	493 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	F2	P00734	622 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	HOXD8	P13378	290 aa	Predicted RBP	11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	ANTXR2	P58335	489 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	KRT32	Q14532	448 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	PGM5	Q15124	567 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	NECTIN1	Q15223	517 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	LY6K	Q17RY6	165 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	TMEM63B	Q5T3F8	832 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	SYNE3	Q6ZMZ3	975 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	NFXL1	Q6ZNB6	911 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	ZNF365	Q70YC5	407 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	DHX37	Q8IY37	1157 aa	Known RBP	11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	AFAP1L1	Q8TED9	768 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	AFG1L	Q8WV93	481 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	TBC1D5	Q92609	795 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	TIFA	Q96CG3	184 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	MSRA	Q9UJ68	235 aa		11.2	□□□□□ -0.62
TRIM25-204	ENST00000570749	SH2B2	O14492	632 aa	Predicted RBP	11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	SLC27A2	O14975	620 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	CYTH3	O43739	400 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	BAIAP3	O94812	1187 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	HMGB1	P09429	215 aa	Known RBP	11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	RCAN1	P53805	252 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	RBL2	Q08999	1139 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	NEDD9	Q14511	834 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	CREB3L3	Q68CJ9	461 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	C16orf59	Q7L2K0	433 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	SGMS1	Q86VZ5	419 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	COPS5	Q92905	334 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	CDHR1	Q96JP9	859 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	CDX2	Q99626	313 aa	Predicted RBP	11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	WNT8A	Q9H1J5	351 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	TRMT13	Q9NUP7	481 aa	Known RBP	11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	RBM28	Q9NW13	759 aa	Known RBP	11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	SLC12A7	Q9Y666	1083 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	SLC4A7	Q9Y6M7	1214 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	EYS	Q5T1H1	3165 aa		11.19	□□□□□ -0.62
TRIM25-204	ENST00000570749	SCN5A	Q14524	2016 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	KAT6A	Q92794	2004 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	hCG_1984214	I3L0E3	225 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	FIBP	O43427	364 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	EFCAB14	O75071	495 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	CDC45	O75419	566 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	MYCL	P12524	364 aa	Predicted RBP	11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	FOSL2	P15408	326 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	ICAM3	P32942	547 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	CCL23	P55773	120 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	PTGIS	Q16647	500 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	TSGA10IP	Q3SY00	556 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	CELF3	Q5SZQ8	465 aa	Known RBP	11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	MYSM1	Q5VVJ2	828 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	CHST3	Q7LGC8	479 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	ZNF713	Q8N859	430 aa	Predicted RBP	11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	C7orf31	Q8N865	590 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	SMARCC2	Q8TAQ2	1214 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	PHOSPHO2	Q8TCD6	241 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	INPP4A	Q96PE3	977 aa	Predicted RBP	11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	SLC9A7	Q96T83	725 aa		11.18	□□□□□ -0.62
TRIM25-204	ENST00000570749	TTYH1	Q9H313	450 aa	Predicted RBP	11.18	□□□□□ -0.62

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