RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 CCSAPQ6IQ19 270 aaPredicted RBP7.41□□□□□ -1.22
SMG1-217ENST00000569764 NEK10Q6ZWH5 1172 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 RASSF3Q86WH2 238 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 CCDC12Q8WUD4 166 aaPredicted RBP7.41□□□□□ -1.22
SMG1-217ENST00000569764 EAF2Q96CJ1 260 aaPredicted RBP7.41□□□□□ -1.22
SMG1-217ENST00000569764 RNPC3Q96LT9 517 aaKnown RBP7.41□□□□□ -1.22
SMG1-217ENST00000569764 CTNND1O60716 968 aaKnown RBP7.41□□□□□ -1.22
SMG1-217ENST00000569764 PDE8BO95263 885 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 IDEP14735 1019 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 HACE1Q8IYU2 909 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 MINPP1Q9UNW1 487 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 RTCAO00442 366 aaKnown RBP7.41□□□□□ -1.22
SMG1-217ENST00000569764 CHMLP26374 656 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 MCTP2Q6DN12 878 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 SMIM5Q71RC9 77 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 PCSK9Q8NBP7 692 aaKnown RBP7.41□□□□□ -1.22
SMG1-217ENST00000569764 GPRC5AQ8NFJ5 357 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 DDX12PQ92771 950 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 EDC3Q96F86 508 aaKnown RBP7.41□□□□□ -1.22
SMG1-217ENST00000569764 CALCOCO1Q9P1Z2 691 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 ZMIZ1Q9ULJ6 1067 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 MORC2Q9Y6X9 1032 aaPredicted RBP7.41□□□□□ -1.22
SMG1-217ENST00000569764 COL4A1P02462 1669 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 GPR37O15354 613 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 XPOTO43592 962 aaKnown RBP7.41□□□□□ -1.22
SMG1-217ENST00000569764 DKC1O60832 514 aaKnown RBP eCLIP7.41□□□□□ -1.22
SMG1-217ENST00000569764 ENPP1P22413 925 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 CASP2P42575 452 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 KCNJ6P48051 423 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 WTAPQ15007 396 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 HLFQ16534 295 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 PARP2Q9UGN5 583 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 GTF3C4Q9UKN8 822 aa7.41□□□□□ -1.22
SMG1-217ENST00000569764 CENPFP49454 3210 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 USP17L10C9JJH3 530 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 SUPT20HL2P0C7V6 817 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 FOXO4P98177 505 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 CRY2Q49AN0 593 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 ALFQ53S48 1182 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 C10orf76Q5T2E6 689 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 CFAP161Q6P656 301 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 TMCO3Q6UWJ1 677 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 RILPL2Q969X0 211 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 ZBED2Q9BTP6 218 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 RTFDC1Q9BY42 306 aaPredicted RBP7.4□□□□□ -1.22
SMG1-217ENST00000569764 CSRNP2Q9H175 543 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 VTI1BQ9UEU0 232 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 ZHX2Q9Y6X8 837 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 ZNF76P36508 570 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 STT3AP46977 705 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 SCNN1DP51172 638 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 MRPS35P82673 323 aaKnown RBP7.4□□□□□ -1.22
SMG1-217ENST00000569764 DEUP1Q05D60 604 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 FAM160B2Q86V87 743 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 PGBD4Q96DM1 585 aa7.4□□□□□ -1.22
SMG1-217ENST00000569764 CCDC8Q9H0W5 538 aaPredicted RBP7.4□□□□□ -1.22
SMG1-217ENST00000569764 ZNF70Q9UC06 446 aaPredicted RBP7.4□□□□□ -1.22
SMG1-217ENST00000569764 TMEM110-MUSTN1A8MSY1 372 aa7.4□□□□□ -1.23
SMG1-217ENST00000569764 NFKBIEO00221 500 aa7.4□□□□□ -1.23
SMG1-217ENST00000569764 KINO60870 393 aaKnown RBP7.4□□□□□ -1.23
SMG1-217ENST00000569764 GNAT1P11488 350 aa7.4□□□□□ -1.23
SMG1-217ENST00000569764 MATR3P43243 847 aaKnown RBP eCLIP7.4□□□□□ -1.23
SMG1-217ENST00000569764 PTPN12Q05209 780 aaKnown RBP7.4□□□□□ -1.23
SMG1-217ENST00000569764 CCDC173Q0VFZ6 552 aa7.4□□□□□ -1.23
SMG1-217ENST00000569764 CERKLQ49MI3 558 aaPredicted RBP7.4□□□□□ -1.23
SMG1-217ENST00000569764 MCF2L2Q86YR7 1114 aa7.4□□□□□ -1.23
SMG1-217ENST00000569764 PPP1R14CQ8TAE6 165 aa7.4□□□□□ -1.23
SMG1-217ENST00000569764 RNF34Q969K3 372 aa7.4□□□□□ -1.23
SMG1-217ENST00000569764 CHAMP1Q96JM3 812 aa7.4□□□□□ -1.23
SMG1-217ENST00000569764 YIPF2Q9BWQ6 316 aa7.4□□□□□ -1.23
SMG1-217ENST00000569764 MED4Q9NPJ6 270 aa7.4□□□□□ -1.23
SMG1-217ENST00000569764 GPR108Q9NPR9 543 aa7.4□□□□□ -1.23
SMG1-217ENST00000569764 MROH7Q68CQ1 1323 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 CCDC196A0A1B0GTZ2 297 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 KPNA6O60684 536 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 AP1G2O75843 785 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 PYGBP11216 843 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 GRK4P32298 578 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 UBA7P41226 1012 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 MAGEA8P43361 318 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 PKP1Q13835 747 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 RAB3GAP1Q15042 981 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 ABCB5Q2M3G0 1257 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 FAM83BQ5T0W9 1011 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 TTLL11Q8NHH1 800 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMG1-217ENST00000569764 BICD1Q96G01 975 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 UROC1Q96N76 676 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 NUP98P52948 1817 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 LRP5O75197 1615 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 ASB14A6NK59 587 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 VAMP1P23763 118 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 CBX1P83916 185 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 TKFCQ3LXA3 575 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 C11orf74Q86VG3 221 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 DEPDC4Q8N2C3 294 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 GIMAP8Q8ND71 665 aaPredicted RBP7.39□□□□□ -1.23
SMG1-217ENST00000569764 ZNF594Q96JF6 807 aaPredicted RBP7.39□□□□□ -1.23
SMG1-217ENST00000569764 GSDMAQ96QA5 445 aa7.39□□□□□ -1.23
SMG1-217ENST00000569764 ESYT1Q9BSJ8 1104 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms