RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 DSCC1Q9BVC3 393 aa17.58■□□□□ 0.4
COMMD4-223ENST00000568301 C1QTNF1Q9BXJ1 281 aa17.58■□□□□ 0.4
COMMD4-223ENST00000568301 FTOQ9C0B1 505 aaKnown RBP eCLIP17.58■□□□□ 0.4
COMMD4-223ENST00000568301 DIAPH3Q9NSV4 1193 aa17.58■□□□□ 0.4
COMMD4-223ENST00000568301 CTNNA3Q9UI47 895 aa17.58■□□□□ 0.4
COMMD4-223ENST00000568301 TANC1Q9C0D5 1861 aa17.57■□□□□ 0.4
COMMD4-223ENST00000568301 B4E1Z4 1266 aa17.57■□□□□ 0.4
COMMD4-223ENST00000568301 ARIH2O95376 493 aa17.57■□□□□ 0.4
COMMD4-223ENST00000568301 GH1P01241 217 aa17.57■□□□□ 0.4
COMMD4-223ENST00000568301 STXBP2Q15833 593 aa17.57■□□□□ 0.4
COMMD4-223ENST00000568301 IMMTQ16891 758 aaKnown RBP17.57■□□□□ 0.4
COMMD4-223ENST00000568301 SPRED2Q7Z698 418 aa17.57■□□□□ 0.4
COMMD4-223ENST00000568301 SESTD1Q86VW0 696 aa17.57■□□□□ 0.4
COMMD4-223ENST00000568301 ENAHQ8N8S7 591 aaPredicted RBP17.57■□□□□ 0.4
COMMD4-223ENST00000568301 RMDN3Q96TC7 470 aa17.57■□□□□ 0.4
COMMD4-223ENST00000568301 EPHX3Q9H6B9 360 aa17.57■□□□□ 0.4
COMMD4-223ENST00000568301 COL20A1Q9P218 1284 aa17.57■□□□□ 0.4
COMMD4-223ENST00000568301 MRPL11Q9Y3B7 192 aaKnown RBP17.57■□□□□ 0.4
COMMD4-223ENST00000568301 TLL1O43897 1013 aa17.56■□□□□ 0.4
COMMD4-223ENST00000568301 IGHDP01880 384 aa17.56■□□□□ 0.4
COMMD4-223ENST00000568301 PARP1P09874 1014 aaKnown RBP17.56■□□□□ 0.4
COMMD4-223ENST00000568301 SEPT14Q6ZU15 432 aa17.56■□□□□ 0.4
COMMD4-223ENST00000568301 AFG1LQ8WV93 481 aa17.56■□□□□ 0.4
COMMD4-223ENST00000568301 KRT23Q9C075 422 aa17.56■□□□□ 0.4
COMMD4-223ENST00000568301 CNNM2Q9H8M5 875 aa17.56■□□□□ 0.4
COMMD4-223ENST00000568301 COG5Q9UP83 839 aa17.56■□□□□ 0.4
COMMD4-223ENST00000568301 NOD1Q9Y239 953 aa17.56■□□□□ 0.4
COMMD4-223ENST00000568301 PTPRSQ13332 1948 aa17.56■□□□□ 0.4
COMMD4-223ENST00000568301 MYH7BA7E2Y1 1941 aa17.55■□□□□ 0.4
COMMD4-223ENST00000568301 KIF28PB7ZC32 967 aa17.55■□□□□ 0.4
COMMD4-223ENST00000568301 EIF3JO75822 258 aaKnown RBP17.55■□□□□ 0.4
COMMD4-223ENST00000568301 MMP3P08254 477 aa17.55■□□□□ 0.4
COMMD4-223ENST00000568301 CASTP20810 708 aaKnown RBP17.55■□□□□ 0.4
COMMD4-223ENST00000568301 CHMP4BP1P59074 171 aa17.55■□□□□ 0.4
COMMD4-223ENST00000568301 ARHGAP1Q07960 439 aa17.55■□□□□ 0.4
COMMD4-223ENST00000568301 GRB10Q13322 594 aa17.55■□□□□ 0.4
COMMD4-223ENST00000568301 PTGISQ16647 500 aa17.55■□□□□ 0.4
COMMD4-223ENST00000568301 LY6KQ17RY6 165 aa17.55■□□□□ 0.4
COMMD4-223ENST00000568301 QRICH1Q2TAL8 776 aa17.55■□□□□ 0.4
COMMD4-223ENST00000568301 FBXO11Q86XK2 927 aa17.55■□□□□ 0.4
COMMD4-223ENST00000568301 CAGE1Q8TC20 777 aa17.55■□□□□ 0.4
COMMD4-223ENST00000568301 JMJD4Q9H9V9 463 aa17.55■□□□□ 0.4
COMMD4-223ENST00000568301 LPXNO60711 386 aa17.54■□□□□ 0.4
COMMD4-223ENST00000568301 BAIAP3O94812 1187 aa17.54■□□□□ 0.4
COMMD4-223ENST00000568301 GPNMBQ14956 572 aa17.54■□□□□ 0.4
COMMD4-223ENST00000568301 ARHGEF16Q5VV41 709 aa17.54■□□□□ 0.4
COMMD4-223ENST00000568301 TMCO2Q7Z6W1 182 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-223ENST00000568301 CCDC155Q8N6L0 562 aa17.54■□□□□ 0.4
COMMD4-223ENST00000568301 AFAP1L1Q8TED9 768 aa17.54■□□□□ 0.4
COMMD4-223ENST00000568301 KAT2BQ92831 832 aa17.54■□□□□ 0.4
COMMD4-223ENST00000568301 HLA-CQ95604 372 aa17.54■□□□□ 0.4
COMMD4-223ENST00000568301 EMID1Q96A84 441 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-223ENST00000568301 UBAC1Q9BSL1 405 aa17.54■□□□□ 0.4
COMMD4-223ENST00000568301 VAT1LQ9HCJ6 419 aa17.54■□□□□ 0.4
COMMD4-223ENST00000568301 MAP3K20Q9NYL2 800 aaKnown RBP17.54■□□□□ 0.4
COMMD4-223ENST00000568301 DDX41Q9UJV9 622 aaKnown RBP17.54■□□□□ 0.4
COMMD4-223ENST00000568301 LCHNA4D1U4 455 aa17.53■□□□□ 0.4
COMMD4-223ENST00000568301 RBAK-RBAKDNI3L0D1 243 aa17.53■□□□□ 0.4
COMMD4-223ENST00000568301 DHX16O60231 1041 aaKnown RBP17.53■□□□□ 0.4
COMMD4-223ENST00000568301 PARNO95453 639 aaKnown RBP17.53■□□□□ 0.4
COMMD4-223ENST00000568301 NR3C2P08235 984 aa17.53■□□□□ 0.4
COMMD4-223ENST00000568301 GHRHRQ02643 423 aa17.53■□□□□ 0.4
COMMD4-223ENST00000568301 DGKDQ16760 1214 aa17.53■□□□□ 0.4
COMMD4-223ENST00000568301 CTAGE1Q96RT6 745 aa17.53■□□□□ 0.4
COMMD4-223ENST00000568301 LRFN3Q9BTN0 628 aa17.53■□□□□ 0.4
COMMD4-223ENST00000568301 AMNQ9BXJ7 453 aa17.53■□□□□ 0.4
COMMD4-223ENST00000568301 COL4A4P53420 1690 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-223ENST00000568301 HSD17B4P51659 736 aa17.52■□□□□ 0.4
COMMD4-223ENST00000568301 RBL2Q08999 1139 aa17.52■□□□□ 0.4
COMMD4-223ENST00000568301 LAMC2Q13753 1193 aa17.52■□□□□ 0.4
COMMD4-223ENST00000568301 IFIT1BQ5T764 474 aaKnown RBP17.52■□□□□ 0.4
COMMD4-223ENST00000568301 GDF6Q6KF10 455 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-223ENST00000568301 CHST3Q7LGC8 479 aa17.52■□□□□ 0.4
COMMD4-223ENST00000568301 SAMD3Q8N6K7 520 aa17.52■□□□□ 0.4
COMMD4-223ENST00000568301 KHSRPQ92945 711 aaKnown RBP eCLIP17.52■□□□□ 0.4
COMMD4-223ENST00000568301 PXMP2Q9NR77 195 aa17.52■□□□□ 0.4
COMMD4-223ENST00000568301 BRWD1Q9NSI6 2320 aa17.52■□□□□ 0.39
COMMD4-223ENST00000568301 KLRF2D3W0D1 207 aa17.51■□□□□ 0.39
COMMD4-223ENST00000568301 CFBP00751 764 aa17.51■□□□□ 0.39
COMMD4-223ENST00000568301 SELPP16109 830 aa17.51■□□□□ 0.39
COMMD4-223ENST00000568301 KCNJ6P48051 423 aa17.51■□□□□ 0.39
COMMD4-223ENST00000568301 WDR5P61964 334 aaKnown RBP17.51■□□□□ 0.39
COMMD4-223ENST00000568301 DEFB103AP81534 67 aa17.51■□□□□ 0.39
COMMD4-223ENST00000568301 KCNV1Q6PIU1 500 aa17.51■□□□□ 0.39
COMMD4-223ENST00000568301 STOX1Q6ZVD7 989 aa17.51■□□□□ 0.39
COMMD4-223ENST00000568301 STAG2Q8N3U4 1231 aa17.51■□□□□ 0.39
COMMD4-223ENST00000568301 MTMR8Q96EF0 704 aa17.51■□□□□ 0.39
COMMD4-223ENST00000568301 KATNAL1Q9BW62 490 aa17.51■□□□□ 0.39
COMMD4-223ENST00000568301 GTF2IRD1Q9UHL9 959 aa17.51■□□□□ 0.39
COMMD4-223ENST00000568301 OPLAHO14841 1288 aa17.5■□□□□ 0.39
COMMD4-223ENST00000568301 PPFIA4O75335 1185 aa17.5■□□□□ 0.39
COMMD4-223ENST00000568301 EIF2AK2P19525 551 aaKnown RBP17.5■□□□□ 0.39
COMMD4-223ENST00000568301 HOXD11P31277 338 aaPredicted RBP17.5■□□□□ 0.39
COMMD4-223ENST00000568301 TRAF1Q13077 416 aa17.5■□□□□ 0.39
COMMD4-223ENST00000568301 SEC23AQ15436 765 aa17.5■□□□□ 0.39
COMMD4-223ENST00000568301 TCTN1Q2MV58 587 aa17.5■□□□□ 0.39
COMMD4-223ENST00000568301 C7orf31Q8N865 590 aa17.5■□□□□ 0.39
COMMD4-223ENST00000568301 PPTC7Q8NI37 304 aa17.5■□□□□ 0.39
COMMD4-223ENST00000568301 GDPD5Q8WTR4 605 aa17.5■□□□□ 0.39
COMMD4-223ENST00000568301 DHX38Q92620 1227 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms