RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 TMEM67Q5HYA8 995 aa17.48■□□□□ 0.39
SCAMP2-209ENST00000567638 OTOP2Q7RTS6 562 aa17.48■□□□□ 0.39
SCAMP2-209ENST00000567638 MB21D2Q8IYB1 491 aaPredicted RBP17.48■□□□□ 0.39
SCAMP2-209ENST00000567638 SAMD3Q8N6K7 520 aa17.48■□□□□ 0.39
SCAMP2-209ENST00000567638 PIGSQ96S52 555 aa17.48■□□□□ 0.39
SCAMP2-209ENST00000567638 PDCD2LQ9BRP1 358 aa17.48■□□□□ 0.39
SCAMP2-209ENST00000567638 RBM8AQ9Y5S9 174 aaKnown RBP17.48■□□□□ 0.39
SCAMP2-209ENST00000567638 CYTH3O43739 400 aa17.47■□□□□ 0.39
SCAMP2-209ENST00000567638 PFKMP08237 780 aa17.47■□□□□ 0.39
SCAMP2-209ENST00000567638 RAB30Q15771 203 aa17.47■□□□□ 0.39
SCAMP2-209ENST00000567638 VWCEQ96DN2 955 aa17.47■□□□□ 0.39
SCAMP2-209ENST00000567638 DDX41Q9UJV9 622 aaKnown RBP17.47■□□□□ 0.39
SCAMP2-209ENST00000567638 MRVI1Q9Y6F6 885 aa17.47■□□□□ 0.39
SCAMP2-209ENST00000567638 TET1Q8NFU7 2136 aa17.47■□□□□ 0.39
SCAMP2-209ENST00000567638 PTPRSQ13332 1948 aa17.47■□□□□ 0.39
SCAMP2-209ENST00000567638 PITPNM1O00562 1244 aa17.46■□□□□ 0.39
SCAMP2-209ENST00000567638 HOXA13P31271 388 aaPredicted RBP17.46■□□□□ 0.39
SCAMP2-209ENST00000567638 CATIPQ7Z7H3 387 aa17.46■□□□□ 0.39
SCAMP2-209ENST00000567638 IGDCC4Q8TDY8 1250 aa17.46■□□□□ 0.39
SCAMP2-209ENST00000567638 EMID1Q96A84 441 aaPredicted RBP17.46■□□□□ 0.39
SCAMP2-209ENST00000567638 PNMA6FA0A0J9YX94 578 aa17.45■□□□□ 0.38
SCAMP2-209ENST00000567638 RGS20O76081 388 aa17.45■□□□□ 0.38
SCAMP2-209ENST00000567638 MYCLP12524 364 aaPredicted RBP17.45■□□□□ 0.38
SCAMP2-209ENST00000567638 CASTP20810 708 aaKnown RBP17.45■□□□□ 0.38
SCAMP2-209ENST00000567638 CHMP4BP1P59074 171 aa17.45■□□□□ 0.38
SCAMP2-209ENST00000567638 PGM5Q15124 567 aa17.45■□□□□ 0.38
SCAMP2-209ENST00000567638 DGKDQ16760 1214 aa17.45■□□□□ 0.38
SCAMP2-209ENST00000567638 SESTD1Q86VW0 696 aa17.45■□□□□ 0.38
SCAMP2-209ENST00000567638 KAT2BQ92831 832 aa17.45■□□□□ 0.38
SCAMP2-209ENST00000567638 MSRAQ9UJ68 235 aa17.45■□□□□ 0.38
SCAMP2-209ENST00000567638 NOD1Q9Y239 953 aa17.45■□□□□ 0.38
SCAMP2-209ENST00000567638 GCOM1H8Y6P7 765 aaPredicted RBP17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 POLR2MP0CAP2 368 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 RFC2P35250 354 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 BFSP2Q13515 415 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 LAMC2Q13753 1193 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 PTGISQ16647 500 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 DEFB128Q7Z7B8 93 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 VSIG10LQ86VR7 867 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 DHX37Q8IY37 1157 aaKnown RBP17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 ZNF654Q8IZM8 581 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 IL31RAQ8NI17 732 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 PPTC7Q8NI37 304 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 MAP3K14Q99558 947 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 MTA3Q9BTC8 594 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 LSG1Q9H089 658 aaKnown RBP17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 LY9Q9HBG7 655 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 SLC4A7Q9Y6M7 1214 aa17.44■□□□□ 0.38
SCAMP2-209ENST00000567638 ZBBXA8MT70 800 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 DDAH1O94760 285 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 IQCF3P0C7M6 154 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 GDF6Q6KF10 455 aaPredicted RBP17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 KCNV1Q6PIU1 500 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 CASC1Q6TDU7 716 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 FCHSD1Q86WN1 690 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 CCDC155Q8N6L0 562 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 RETREG2Q8NC44 543 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 CTCFLQ8NI51 663 aaPredicted RBP17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 CTAGE1Q96RT6 745 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 ESYT1Q9BSJ8 1104 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 KATNAL1Q9BW62 490 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 NKX2-4Q9H2Z4 354 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 YBX2Q9Y2T7 364 aaKnown RBP17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 UNC80Q8N2C7 3258 aa17.43■□□□□ 0.38
SCAMP2-209ENST00000567638 EYSQ5T1H1 3165 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 PRC1O43663 620 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 F2P00734 622 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 ACTN1P12814 892 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 HOXD8P13378 290 aaPredicted RBP17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 CCND2P30279 289 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 MCM5P33992 734 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 PSEN2P49810 448 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 MYL10Q9BUA6 226 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 SPZ1Q9BXG8 430 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 PRDM12Q9H4Q4 367 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 SLC28A3Q9HAS3 691 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 GTF2IRD1Q9UHL9 959 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 FRMPD4Q14CM0 1322 aa17.42■□□□□ 0.38
SCAMP2-209ENST00000567638 HAS3O00219 553 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 SLC27A2O14975 620 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 GGPS1O95749 300 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 ZNF286BP0CG31 522 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 ATP2A2P16615 1042 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 UBA1P22314 1058 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 KIF5BP33176 963 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 RABGGTBP53611 331 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 MFSD10Q14728 455 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 CELF3Q5SZQ8 465 aaKnown RBP17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 MYSM1Q5VVJ2 828 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 CAGE1Q8TC20 777 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 PIBF1Q8WXW3 757 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 TMEM87BQ96K49 555 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 GAS2L1Q99501 681 aaPredicted RBP17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 ALG1Q9BT22 464 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 COL25A1Q9BXS0 654 aaPredicted RBP17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 PCDHA11Q9Y5I1 949 aa17.41■□□□□ 0.38
SCAMP2-209ENST00000567638 SH2B2O14492 632 aaPredicted RBP17.4■□□□□ 0.38
SCAMP2-209ENST00000567638 TGFB3P10600 412 aa17.4■□□□□ 0.38
SCAMP2-209ENST00000567638 SMARCA1P28370 1054 aa17.4■□□□□ 0.38
SCAMP2-209ENST00000567638 KIAA0753Q2KHM9 967 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms